RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 FECHP22830 423 aa12.53□□□□□ -0.4
NR4A1-215ENST00000550557 CYP2F1P24903 491 aa12.53□□□□□ -0.4
NR4A1-215ENST00000550557 PRKCIP41743 596 aa12.53□□□□□ -0.4
NR4A1-215ENST00000550557 MARSP56192 900 aaKnown RBP12.53□□□□□ -0.4
NR4A1-215ENST00000550557 CAMK2GQ13555 558 aaPredicted RBP12.53□□□□□ -0.4
NR4A1-215ENST00000550557 AAK1Q2M2I8 961 aa12.53□□□□□ -0.4
NR4A1-215ENST00000550557 FAM46CQ5VWP2 391 aa12.53□□□□□ -0.4
NR4A1-215ENST00000550557 TDRD5Q8NAT2 981 aaKnown RBP12.53□□□□□ -0.4
NR4A1-215ENST00000550557 KREMEN2Q8NCW0 462 aa12.53□□□□□ -0.4
NR4A1-215ENST00000550557 SLC26A7Q8TE54 656 aa12.53□□□□□ -0.4
NR4A1-215ENST00000550557 NCLNQ969V3 563 aa12.53□□□□□ -0.4
NR4A1-215ENST00000550557 SERPINI1Q99574 410 aa12.53□□□□□ -0.4
NR4A1-215ENST00000550557 ZDHHC6Q9H6R6 413 aa12.53□□□□□ -0.4
NR4A1-215ENST00000550557 GDF3Q9NR23 364 aa12.53□□□□□ -0.4
NR4A1-215ENST00000550557 NDRG2Q9UN36 371 aaKnown RBP12.53□□□□□ -0.4
NR4A1-215ENST00000550557 PCDHGC5Q9Y5F6 944 aa12.53□□□□□ -0.4
NR4A1-215ENST00000550557 MYH3P11055 1940 aa12.52□□□□□ -0.4
NR4A1-215ENST00000550557 TBL1XO60907 577 aa12.52□□□□□ -0.4
NR4A1-215ENST00000550557 ERVK-10P10266 1014 aa12.52□□□□□ -0.4
NR4A1-215ENST00000550557 ITIH2P19823 946 aa12.52□□□□□ -0.4
NR4A1-215ENST00000550557 RFC2P35250 354 aa12.52□□□□□ -0.4
NR4A1-215ENST00000550557 VSTM1Q6UX27 236 aa12.52□□□□□ -0.4
NR4A1-215ENST00000550557 TMC5Q6UXY8 1006 aa12.52□□□□□ -0.4
NR4A1-215ENST00000550557 NT5DC3Q86UY8 548 aa12.52□□□□□ -0.4
NR4A1-215ENST00000550557 GRIN3AQ8TCU5 1115 aa12.52□□□□□ -0.4
NR4A1-215ENST00000550557 ZBTB10Q96DT7 871 aa12.52□□□□□ -0.4
NR4A1-215ENST00000550557 APOL2Q9BQE5 337 aa12.52□□□□□ -0.4
NR4A1-215ENST00000550557 FICDQ9BVA6 458 aa12.52□□□□□ -0.4
NR4A1-215ENST00000550557 GANQ9H2C0 597 aa12.52□□□□□ -0.4
NR4A1-215ENST00000550557 SPACA6W5XKT8 324 aa12.52□□□□□ -0.4
NR4A1-215ENST00000550557 SNED1Q8TER0 1413 aa12.52□□□□□ -0.4
NR4A1-215ENST00000550557 ADAMTS7Q9UKP4 1686 aa12.52□□□□□ -0.41
NR4A1-215ENST00000550557 SUPT3HB4E1H0 165 aa12.52□□□□□ -0.41
NR4A1-215ENST00000550557 TSPAN1O60635 241 aa12.52□□□□□ -0.41
NR4A1-215ENST00000550557 SUPT3HO75486 399 aa12.52□□□□□ -0.41
NR4A1-215ENST00000550557 MSH3P20585 1137 aa12.52□□□□□ -0.41
NR4A1-215ENST00000550557 CLK2P49760 499 aaKnown RBP12.52□□□□□ -0.41
NR4A1-215ENST00000550557 SNRPD1P62314 119 aaKnown RBP12.52□□□□□ -0.41
NR4A1-215ENST00000550557 ARHGAP1Q07960 439 aa12.52□□□□□ -0.41
NR4A1-215ENST00000550557 SPDYE7PQ495Y7 208 aa12.52□□□□□ -0.41
NR4A1-215ENST00000550557 ACBD5Q5T8D3 534 aaPredicted RBP12.52□□□□□ -0.41
NR4A1-215ENST00000550557 NUDCD3Q8IVD9 361 aa12.52□□□□□ -0.41
NR4A1-215ENST00000550557 ANKRD52Q8NB46 1076 aa12.52□□□□□ -0.41
NR4A1-215ENST00000550557 PPWD1Q96BP3 646 aaKnown RBP12.52□□□□□ -0.41
NR4A1-215ENST00000550557 STAMBPL1Q96FJ0 436 aa12.52□□□□□ -0.41
NR4A1-215ENST00000550557 THOC1Q96FV9 657 aaKnown RBP12.52□□□□□ -0.41
NR4A1-215ENST00000550557 CCDC3Q9BQI4 270 aa12.52□□□□□ -0.41
NR4A1-215ENST00000550557 ZSWIM1Q9BR11 485 aa12.52□□□□□ -0.41
NR4A1-215ENST00000550557 FRMD8Q9BZ67 464 aaPredicted RBP12.52□□□□□ -0.41
NR4A1-215ENST00000550557 TCP11X1B4DZS4 312 aa12.52□□□□□ -0.41
NR4A1-215ENST00000550557 VPS26AO75436 327 aa12.52□□□□□ -0.41
NR4A1-215ENST00000550557 C8AP07357 584 aa12.52□□□□□ -0.41
NR4A1-215ENST00000550557 ADRB2P07550 413 aa12.52□□□□□ -0.41
NR4A1-215ENST00000550557 TGM2P21980 687 aa12.52□□□□□ -0.41
NR4A1-215ENST00000550557 GRK3P35626 688 aa12.52□□□□□ -0.41
NR4A1-215ENST00000550557 HALP42357 657 aa12.52□□□□□ -0.41
NR4A1-215ENST00000550557 NCKAP1LP55160 1127 aa12.52□□□□□ -0.41
NR4A1-215ENST00000550557 SKOR1P84550 965 aa12.52□□□□□ -0.41
NR4A1-215ENST00000550557 PRKAA1Q13131 559 aa12.52□□□□□ -0.41
NR4A1-215ENST00000550557 TRMT10CQ7L0Y3 403 aaKnown RBP12.52□□□□□ -0.41
NR4A1-215ENST00000550557 FAM35AQ86V20 835 aa12.52□□□□□ -0.41
NR4A1-215ENST00000550557 OR5B17Q8NGF7 314 aa12.52□□□□□ -0.41
NR4A1-215ENST00000550557 CXorf40AQ8TE69 158 aa12.52□□□□□ -0.41
NR4A1-215ENST00000550557 PXYLP1Q8TE99 480 aa12.52□□□□□ -0.41
NR4A1-215ENST00000550557 CXorf56Q9H5V9 222 aa12.52□□□□□ -0.41
NR4A1-215ENST00000550557 CFAP97Q9P2B7 532 aa12.52□□□□□ -0.41
NR4A1-215ENST00000550557 CCT8L1PA6NM43 557 aa12.51□□□□□ -0.41
NR4A1-215ENST00000550557 TRIM16O95361 564 aa12.51□□□□□ -0.41
NR4A1-215ENST00000550557 KCNJ1P48048 391 aa12.51□□□□□ -0.41
NR4A1-215ENST00000550557 BMT2Q1RMZ1 405 aa12.51□□□□□ -0.41
NR4A1-215ENST00000550557 TRMT11Q7Z4G4 463 aaKnown RBP12.51□□□□□ -0.41
NR4A1-215ENST00000550557 SPATA21Q7Z572 469 aa12.51□□□□□ -0.41
NR4A1-215ENST00000550557 GIMAP4Q9NUV9 329 aa12.51□□□□□ -0.41
NR4A1-215ENST00000550557 TUBGCP4Q9UGJ1 667 aa12.51□□□□□ -0.41
NR4A1-215ENST00000550557 ZNF510Q9Y2H8 683 aa12.51□□□□□ -0.41
NR4A1-215ENST00000550557 PDE4DIPQ5VU43 2346 aa12.51□□□□□ -0.41
NR4A1-215ENST00000550557 ASTN1O14525 1302 aa12.51□□□□□ -0.41
NR4A1-215ENST00000550557 SYN3O14994 580 aa12.51□□□□□ -0.41
NR4A1-215ENST00000550557 TBC1D4O60343 1298 aa12.51□□□□□ -0.41
NR4A1-215ENST00000550557 DNTTP04053 509 aa12.51□□□□□ -0.41
NR4A1-215ENST00000550557 OR4Q2P0C623 313 aa12.51□□□□□ -0.41
NR4A1-215ENST00000550557 PPP3CAQ08209 521 aa12.51□□□□□ -0.41
NR4A1-215ENST00000550557 ARMC12Q5T9G4 340 aa12.51□□□□□ -0.41
NR4A1-215ENST00000550557 DOK6Q6PKX4 331 aa12.51□□□□□ -0.41
NR4A1-215ENST00000550557 C11orf96Q7Z7L8 435 aa12.51□□□□□ -0.41
NR4A1-215ENST00000550557 MON1AQ86VX9 555 aa12.51□□□□□ -0.41
NR4A1-215ENST00000550557 TSEN2Q8NCE0 465 aaKnown RBP12.51□□□□□ -0.41
NR4A1-215ENST00000550557 FLCNQ8NFG4 579 aa12.51□□□□□ -0.41
NR4A1-215ENST00000550557 ING5Q8WYH8 240 aa12.51□□□□□ -0.41
NR4A1-215ENST00000550557 TEPSINQ96N21 525 aa12.51□□□□□ -0.41
NR4A1-215ENST00000550557 DHX33Q9H6R0 707 aaKnown RBP12.51□□□□□ -0.41
NR4A1-215ENST00000550557 OSGEPQ9NPF4 335 aa12.51□□□□□ -0.41
NR4A1-215ENST00000550557 TBC1D13Q9NVG8 400 aa12.51□□□□□ -0.41
NR4A1-215ENST00000550557 RPS6KL1Q9Y6S9 549 aa12.51□□□□□ -0.41
NR4A1-215ENST00000550557 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.51□□□□□ -0.41
NR4A1-215ENST00000550557 CCDC195A0A1B0GUA6 201 aa12.51□□□□□ -0.41
NR4A1-215ENST00000550557 DDX3XO00571 662 aaKnown RBP eCLIP12.51□□□□□ -0.41
NR4A1-215ENST00000550557 FAM153BP0C7A2 387 aa12.51□□□□□ -0.41
NR4A1-215ENST00000550557 MYBL2P10244 700 aa12.51□□□□□ -0.41
NR4A1-215ENST00000550557 TNFRSF8P28908 595 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms