RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 DCAF12L1Q5VU92 463 aa18.05■□□□□ 0.48
HDAC7-227ENST00000548080 DAB2IPQ5VWQ8 1189 aa18.05■□□□□ 0.48
HDAC7-227ENST00000548080 TPRG1Q6ZUI0 275 aa18.05■□□□□ 0.48
HDAC7-227ENST00000548080 ZNF572Q7Z3I7 529 aaPredicted RBP18.05■□□□□ 0.48
HDAC7-227ENST00000548080 SCML4Q8N228 414 aa18.05■□□□□ 0.48
HDAC7-227ENST00000548080 LRRN4CLQ8ND94 238 aa18.05■□□□□ 0.48
HDAC7-227ENST00000548080 FLCNQ8NFG4 579 aa18.05■□□□□ 0.48
HDAC7-227ENST00000548080 ACTRT1Q8TDG2 376 aa18.05■□□□□ 0.48
HDAC7-227ENST00000548080 CSGALNACT1Q8TDX6 532 aa18.05■□□□□ 0.48
HDAC7-227ENST00000548080 RNF139Q8WU17 664 aa18.05■□□□□ 0.48
HDAC7-227ENST00000548080 IRGQQ8WZA9 623 aa18.05■□□□□ 0.48
HDAC7-227ENST00000548080 MARCH2Q9P0N8 246 aa18.05■□□□□ 0.48
HDAC7-227ENST00000548080 NAALADL1Q9UQQ1 740 aa18.05■□□□□ 0.48
HDAC7-227ENST00000548080 SLC12A8A0AV02 714 aa18.04■□□□□ 0.48
HDAC7-227ENST00000548080 STK25O00506 426 aa18.04■□□□□ 0.48
HDAC7-227ENST00000548080 HSF2BPO75031 334 aa18.04■□□□□ 0.48
HDAC7-227ENST00000548080 RNF8O76064 485 aa18.04■□□□□ 0.48
HDAC7-227ENST00000548080 FYNP06241 537 aa18.04■□□□□ 0.48
HDAC7-227ENST00000548080 DESP17661 470 aa18.04■□□□□ 0.48
HDAC7-227ENST00000548080 SDC4P31431 198 aa18.04■□□□□ 0.48
HDAC7-227ENST00000548080 YWHAZP63104 245 aaKnown RBP18.04■□□□□ 0.48
HDAC7-227ENST00000548080 PFKPQ01813 784 aa18.04■□□□□ 0.48
HDAC7-227ENST00000548080 MLF2Q15773 248 aaPredicted RBP18.04■□□□□ 0.48
HDAC7-227ENST00000548080 CCDC14Q49A88 953 aa18.04■□□□□ 0.48
HDAC7-227ENST00000548080 ADAM32Q8TC27 787 aa18.04■□□□□ 0.48
HDAC7-227ENST00000548080 FAM83CQ9BQN1 747 aa18.04■□□□□ 0.48
HDAC7-227ENST00000548080 DDX23Q9BUQ8 820 aaKnown RBP18.04■□□□□ 0.48
HDAC7-227ENST00000548080 MFSD1Q9H3U5 465 aa18.04■□□□□ 0.48
HDAC7-227ENST00000548080 ABCC13Q9NSE7 274 aa18.04■□□□□ 0.48
HDAC7-227ENST00000548080 WNT16Q9UBV4 365 aa18.04■□□□□ 0.48
HDAC7-227ENST00000548080 TTC7AQ9ULT0 858 aaPredicted RBP18.04■□□□□ 0.48
HDAC7-227ENST00000548080 SH3BP1Q9Y3L3 701 aa18.04■□□□□ 0.48
HDAC7-227ENST00000548080 LRCH4O75427 683 aa18.03■□□□□ 0.48
HDAC7-227ENST00000548080 DAB1O75553 588 aa18.03■□□□□ 0.48
HDAC7-227ENST00000548080 PYGMP11217 842 aa18.03■□□□□ 0.48
HDAC7-227ENST00000548080 NCAM1P13591 858 aa18.03■□□□□ 0.48
HDAC7-227ENST00000548080 TCF3P15923 654 aa18.03■□□□□ 0.48
HDAC7-227ENST00000548080 PTPN9P43378 593 aa18.03■□□□□ 0.48
HDAC7-227ENST00000548080 KPNA1P52294 538 aaPredicted RBP18.03■□□□□ 0.48
HDAC7-227ENST00000548080 PITX1P78337 314 aaPredicted RBP18.03■□□□□ 0.48
HDAC7-227ENST00000548080 ZNF211Q13398 564 aaPredicted RBP18.03■□□□□ 0.48
HDAC7-227ENST00000548080 HADHQ16836 314 aaKnown RBP18.03■□□□□ 0.48
HDAC7-227ENST00000548080 EML3Q32P44 896 aa18.03■□□□□ 0.48
HDAC7-227ENST00000548080 SYPL2Q5VXT5 272 aa18.03■□□□□ 0.48
HDAC7-227ENST00000548080 NAIF1Q69YI7 327 aaPredicted RBP18.03■□□□□ 0.48
HDAC7-227ENST00000548080 BBS7Q8IWZ6 715 aa18.03■□□□□ 0.48
HDAC7-227ENST00000548080 ARFGAP1Q8N6T3 406 aa18.03■□□□□ 0.48
HDAC7-227ENST00000548080 OSCP1Q8WVF1 389 aa18.03■□□□□ 0.48
HDAC7-227ENST00000548080 GOLGA1Q92805 767 aa18.03■□□□□ 0.48
HDAC7-227ENST00000548080 DNASE1L2Q92874 299 aa18.03■□□□□ 0.48
HDAC7-227ENST00000548080 PBXIP1Q96AQ6 731 aa18.03■□□□□ 0.48
HDAC7-227ENST00000548080 NCAPGQ9BPX3 1015 aa18.03■□□□□ 0.48
HDAC7-227ENST00000548080 FOXQ1Q9C009 403 aa18.03■□□□□ 0.48
HDAC7-227ENST00000548080 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.03■□□□□ 0.48
HDAC7-227ENST00000548080 SMARCAL1Q9NZC9 954 aa18.03■□□□□ 0.48
HDAC7-227ENST00000548080 PIAS3Q9Y6X2 628 aa18.03■□□□□ 0.48
HDAC7-227ENST00000548080 EFCAB8A8MWE9 144 aa18.02■□□□□ 0.48
HDAC7-227ENST00000548080 PGRMC1O00264 195 aaKnown RBP18.02■□□□□ 0.48
HDAC7-227ENST00000548080 STC2O76061 302 aa18.02■□□□□ 0.48
HDAC7-227ENST00000548080 PCK1P35558 622 aa18.02■□□□□ 0.48
HDAC7-227ENST00000548080 TUBB4BP68371 445 aa18.02■□□□□ 0.48
HDAC7-227ENST00000548080 C15orf59Q2T9L4 293 aaPredicted RBP18.02■□□□□ 0.48
HDAC7-227ENST00000548080 SEL1L2Q5TEA6 688 aa18.02■□□□□ 0.48
HDAC7-227ENST00000548080 KLHDC10Q6PID8 442 aa18.02■□□□□ 0.48
HDAC7-227ENST00000548080 TADA2BQ86TJ2 420 aa18.02■□□□□ 0.48
HDAC7-227ENST00000548080 DDX42Q86XP3 938 aaKnown RBP eCLIP18.02■□□□□ 0.48
HDAC7-227ENST00000548080 KATNAL2Q8IYT4 538 aa18.02■□□□□ 0.48
HDAC7-227ENST00000548080 CFAP57Q96MR6 1250 aa18.02■□□□□ 0.48
HDAC7-227ENST00000548080 CDK5RAP1Q96SZ6 601 aaKnown RBP18.02■□□□□ 0.48
HDAC7-227ENST00000548080 TBC1D17Q9HA65 648 aa18.02■□□□□ 0.48
HDAC7-227ENST00000548080 F5P12259 2224 aa18.02■□□□□ 0.48
HDAC7-227ENST00000548080 ZDBF2Q9HCK1 2354 aa18.02■□□□□ 0.48
HDAC7-227ENST00000548080 SHISA7A6NL88 538 aa18.01■□□□□ 0.47
HDAC7-227ENST00000548080 CTIFO43310 598 aaKnown RBP18.01■□□□□ 0.47
HDAC7-227ENST00000548080 GREM1O60565 184 aa18.01■□□□□ 0.47
HDAC7-227ENST00000548080 TCF4P15884 667 aa18.01■□□□□ 0.47
HDAC7-227ENST00000548080 MIPP30301 263 aa18.01■□□□□ 0.47
HDAC7-227ENST00000548080 GJC1P36383 396 aa18.01■□□□□ 0.47
HDAC7-227ENST00000548080 MATKP42679 507 aa18.01■□□□□ 0.47
HDAC7-227ENST00000548080 VCPP55072 806 aaKnown RBP18.01■□□□□ 0.47
HDAC7-227ENST00000548080 ATP11AP98196 1134 aa18.01■□□□□ 0.47
HDAC7-227ENST00000548080 RUNX3Q13761 415 aa18.01■□□□□ 0.47
HDAC7-227ENST00000548080 ITPRIPL2Q3MIP1 535 aa18.01■□□□□ 0.47
HDAC7-227ENST00000548080 TMEM31Q5JXX7 168 aa18.01■□□□□ 0.47
HDAC7-227ENST00000548080 TXNDC11Q6PKC3 985 aa18.01■□□□□ 0.47
HDAC7-227ENST00000548080 POLNQ7Z5Q5 900 aa18.01■□□□□ 0.47
HDAC7-227ENST00000548080 DEFB106AQ8N104 65 aa18.01■□□□□ 0.47
HDAC7-227ENST00000548080 ZNF276Q8N554 614 aa18.01■□□□□ 0.47
HDAC7-227ENST00000548080 SPATA4Q8NEY3 305 aa18.01■□□□□ 0.47
HDAC7-227ENST00000548080 DQX1Q8TE96 717 aaKnown RBP18.01■□□□□ 0.47
HDAC7-227ENST00000548080 SLC2A13Q96QE2 648 aa18.01■□□□□ 0.47
HDAC7-227ENST00000548080 NAP1L3Q99457 506 aaPredicted RBP18.01■□□□□ 0.47
HDAC7-227ENST00000548080 POPDC2Q9HBU9 364 aa18.01■□□□□ 0.47
HDAC7-227ENST00000548080 OLA1Q9NTK5 396 aaKnown RBP18.01■□□□□ 0.47
HDAC7-227ENST00000548080 DDX56Q9NY93 547 aaKnown RBP18.01■□□□□ 0.47
HDAC7-227ENST00000548080 MTF2Q9Y483 593 aaPredicted RBP18.01■□□□□ 0.47
HDAC7-227ENST00000548080 SYNJ2BP-COX16A0A087WUM0 186 aa18.01■□□□□ 0.47
HDAC7-227ENST00000548080 UQCRHLA0A096LP55 91 aa18.01■□□□□ 0.47
HDAC7-227ENST00000548080 E2F8A0AVK6 867 aa18.01■□□□□ 0.47
HDAC7-227ENST00000548080 CAPN9O14815 690 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms