RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 PLIN5Q00G26 463 aa12.51□□□□□ -0.41
NPC1L1-204ENST00000546276 UBAP2LQ14157 1087 aaKnown RBP12.51□□□□□ -0.41
NPC1L1-204ENST00000546276 ASTE1Q2TB18 679 aaPredicted RBP12.51□□□□□ -0.41
NPC1L1-204ENST00000546276 ATP6AP1LQ52LC2 224 aa12.51□□□□□ -0.41
NPC1L1-204ENST00000546276 LRRC8DQ7L1W4 858 aa12.51□□□□□ -0.41
NPC1L1-204ENST00000546276 CENPLQ8N0S6 344 aaPredicted RBP12.51□□□□□ -0.41
NPC1L1-204ENST00000546276 ACMSDQ8TDX5 336 aa12.51□□□□□ -0.41
NPC1L1-204ENST00000546276 KREMEN1Q96MU8 473 aa12.51□□□□□ -0.41
NPC1L1-204ENST00000546276 SLC25A23Q9BV35 468 aa12.51□□□□□ -0.41
NPC1L1-204ENST00000546276 SLC17A7Q9P2U7 560 aa12.51□□□□□ -0.41
NPC1L1-204ENST00000546276 VAV3Q9UKW4 847 aa12.51□□□□□ -0.41
NPC1L1-204ENST00000546276 IFT172Q9UG01 1749 aa12.51□□□□□ -0.41
NPC1L1-204ENST00000546276 ASTN2O75129 1339 aaPredicted RBP12.51□□□□□ -0.41
NPC1L1-204ENST00000546276 C3P01024 1663 aa12.51□□□□□ -0.41
NPC1L1-204ENST00000546276 CACNA1FO60840 1977 aa12.5□□□□□ -0.41
NPC1L1-204ENST00000546276 VWA5AO00534 786 aa12.5□□□□□ -0.41
NPC1L1-204ENST00000546276 ACKR2O00590 384 aa12.5□□□□□ -0.41
NPC1L1-204ENST00000546276 BAIAP3O94812 1187 aa12.5□□□□□ -0.41
NPC1L1-204ENST00000546276 SLC2A3P11169 496 aa12.5□□□□□ -0.41
NPC1L1-204ENST00000546276 MLH1P40692 756 aa12.5□□□□□ -0.41
NPC1L1-204ENST00000546276 POU6F1Q14863 301 aa12.5□□□□□ -0.41
NPC1L1-204ENST00000546276 RRM2BQ7LG56 351 aa12.5□□□□□ -0.41
NPC1L1-204ENST00000546276 SCUBE3Q8IX30 993 aa12.5□□□□□ -0.41
NPC1L1-204ENST00000546276 BRD8Q9H0E9 1235 aa12.5□□□□□ -0.41
NPC1L1-204ENST00000546276 KLHL25Q9H0H3 589 aa12.5□□□□□ -0.41
NPC1L1-204ENST00000546276 TRHDEQ9UKU6 1024 aa12.5□□□□□ -0.41
NPC1L1-204ENST00000546276 R3HDM2Q9Y2K5 976 aaKnown RBP12.5□□□□□ -0.41
NPC1L1-204ENST00000546276 PCDHA11Q9Y5I1 949 aa12.5□□□□□ -0.41
NPC1L1-204ENST00000546276 A0A087WZ62 844 aa12.5□□□□□ -0.41
NPC1L1-204ENST00000546276 TCRBV9S1A1TA0A576 114 aa12.5□□□□□ -0.41
NPC1L1-204ENST00000546276 VPS26AO75436 327 aa12.5□□□□□ -0.41
NPC1L1-204ENST00000546276 RPS12P25398 132 aaKnown RBP12.5□□□□□ -0.41
NPC1L1-204ENST00000546276 ATP6V1E1P36543 226 aa12.5□□□□□ -0.41
NPC1L1-204ENST00000546276 BLMHQ13867 455 aa12.5□□□□□ -0.41
NPC1L1-204ENST00000546276 ZACNQ401N2 412 aa12.5□□□□□ -0.41
NPC1L1-204ENST00000546276 UGT3A1Q6NUS8 523 aa12.5□□□□□ -0.41
NPC1L1-204ENST00000546276 ISLR2Q6UXK2 745 aa12.5□□□□□ -0.41
NPC1L1-204ENST00000546276 SNX31Q8N9S9 440 aa12.5□□□□□ -0.41
NPC1L1-204ENST00000546276 DNERQ8NFT8 737 aa12.5□□□□□ -0.41
NPC1L1-204ENST00000546276 USP6NLQ92738 828 aa12.5□□□□□ -0.41
NPC1L1-204ENST00000546276 PPP1R10Q96QC0 940 aaKnown RBP12.5□□□□□ -0.41
NPC1L1-204ENST00000546276 FDXACB1Q9BRP7 624 aaPredicted RBP12.5□□□□□ -0.41
NPC1L1-204ENST00000546276 KATNAL1Q9BW62 490 aa12.5□□□□□ -0.41
NPC1L1-204ENST00000546276 IKZF4Q9H2S9 585 aa12.5□□□□□ -0.41
NPC1L1-204ENST00000546276 TRIM45Q9H8W5 580 aaPredicted RBP12.5□□□□□ -0.41
NPC1L1-204ENST00000546276 KCNK1O00180 336 aa12.5□□□□□ -0.41
NPC1L1-204ENST00000546276 PGM3O95394 542 aa12.5□□□□□ -0.41
NPC1L1-204ENST00000546276 SCARA3Q6AZY7 606 aa12.5□□□□□ -0.41
NPC1L1-204ENST00000546276 EP400NLQ6ZTU2 488 aa12.5□□□□□ -0.41
NPC1L1-204ENST00000546276 PATL1Q86TB9 770 aaKnown RBP12.5□□□□□ -0.41
NPC1L1-204ENST00000546276 CCDC103Q8IW40 242 aa12.5□□□□□ -0.41
NPC1L1-204ENST00000546276 DCP1BQ8IZD4 617 aaKnown RBP12.5□□□□□ -0.41
NPC1L1-204ENST00000546276 PHF21BQ96EK2 531 aa12.5□□□□□ -0.41
NPC1L1-204ENST00000546276 SYTL2Q9HCH5 934 aa12.5□□□□□ -0.41
NPC1L1-204ENST00000546276 LGALS13Q9UHV8 139 aa12.5□□□□□ -0.41
NPC1L1-204ENST00000546276 HACL1Q9UJ83 578 aa12.5□□□□□ -0.41
NPC1L1-204ENST00000546276 STX7O15400 261 aaKnown RBP12.5□□□□□ -0.41
NPC1L1-204ENST00000546276 TRUB2O95900 331 aaKnown RBP12.5□□□□□ -0.41
NPC1L1-204ENST00000546276 VTNP04004 478 aa12.5□□□□□ -0.41
NPC1L1-204ENST00000546276 CTSHP09668 335 aa12.5□□□□□ -0.41
NPC1L1-204ENST00000546276 ERVK-10P10266 1014 aa12.5□□□□□ -0.41
NPC1L1-204ENST00000546276 PTGIRP43119 386 aa12.5□□□□□ -0.41
NPC1L1-204ENST00000546276 GMPSP49915 693 aaPredicted RBP12.5□□□□□ -0.41
NPC1L1-204ENST00000546276 ZNF143P52747 638 aaPredicted RBP12.5□□□□□ -0.41
NPC1L1-204ENST00000546276 ATP1A4Q13733 1029 aa12.5□□□□□ -0.41
NPC1L1-204ENST00000546276 MAPRE1Q15691 268 aaKnown RBP12.5□□□□□ -0.41
NPC1L1-204ENST00000546276 TSHZ1Q6ZSZ6 1077 aa12.5□□□□□ -0.41
NPC1L1-204ENST00000546276 C12orf50Q8NA57 414 aaPredicted RBP12.5□□□□□ -0.41
NPC1L1-204ENST00000546276 BDH2Q9BUT1 245 aa12.5□□□□□ -0.41
NPC1L1-204ENST00000546276 C9orf16Q9BUW7 83 aa12.5□□□□□ -0.41
NPC1L1-204ENST00000546276 PORCNQ9H237 461 aa12.5□□□□□ -0.41
NPC1L1-204ENST00000546276 SEMA6AQ9H2E6 1030 aa12.5□□□□□ -0.41
NPC1L1-204ENST00000546276 CLIC5Q9NZA1 410 aa12.5□□□□□ -0.41
NPC1L1-204ENST00000546276 NDUFAF1Q9Y375 327 aa12.5□□□□□ -0.41
NPC1L1-204ENST00000546276 MON2Q7Z3U7 1717 aa12.5□□□□□ -0.41
NPC1L1-204ENST00000546276 C5orf58C9J3I9 102 aa12.49□□□□□ -0.41
NPC1L1-204ENST00000546276 CYB561D2O14569 222 aa12.49□□□□□ -0.41
NPC1L1-204ENST00000546276 INPP4BO15327 924 aa12.49□□□□□ -0.41
NPC1L1-204ENST00000546276 LDLRP01130 860 aa12.49□□□□□ -0.41
NPC1L1-204ENST00000546276 CSTF3Q12996 717 aaKnown RBP12.49□□□□□ -0.41
NPC1L1-204ENST00000546276 MRPL28Q13084 256 aaKnown RBP12.49□□□□□ -0.41
NPC1L1-204ENST00000546276 KRT33BQ14525 404 aa12.49□□□□□ -0.41
NPC1L1-204ENST00000546276 MBOAT7Q96N66 472 aa12.49□□□□□ -0.41
NPC1L1-204ENST00000546276 EPS8L2Q9H6S3 715 aa12.49□□□□□ -0.41
NPC1L1-204ENST00000546276 TMEM161AQ9NX61 479 aa12.49□□□□□ -0.41
NPC1L1-204ENST00000546276 RPTORQ8N122 1335 aa12.49□□□□□ -0.41
NPC1L1-204ENST00000546276 ZC3H4Q9UPT8 1303 aaKnown RBP12.49□□□□□ -0.41
NPC1L1-204ENST00000546276 DLG5Q8TDM6 1919 aa12.49□□□□□ -0.41
NPC1L1-204ENST00000546276 A0A0A0MRY4 1105 aa12.49□□□□□ -0.41
NPC1L1-204ENST00000546276 NCF1BA6NI72 391 aaPredicted RBP12.49□□□□□ -0.41
NPC1L1-204ENST00000546276 NCF1CA8MVU1 366 aaPredicted RBP12.49□□□□□ -0.41
NPC1L1-204ENST00000546276 ZBTB24O43167 697 aaPredicted RBP12.49□□□□□ -0.41
NPC1L1-204ENST00000546276 NCF1P14598 390 aaPredicted RBP12.49□□□□□ -0.41
NPC1L1-204ENST00000546276 DDX5P17844 614 aaKnown RBP12.49□□□□□ -0.41
NPC1L1-204ENST00000546276 TKTL1P51854 596 aa12.49□□□□□ -0.41
NPC1L1-204ENST00000546276 RAD23AP54725 363 aa12.49□□□□□ -0.41
NPC1L1-204ENST00000546276 XIAPP98170 497 aa12.49□□□□□ -0.41
NPC1L1-204ENST00000546276 TWF1Q12792 350 aa12.49□□□□□ -0.41
NPC1L1-204ENST00000546276 SLC1A5Q15758 541 aa12.49□□□□□ -0.41
NPC1L1-204ENST00000546276 FBXO47Q5MNV8 452 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms