RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 TSPAN9O75954 239 aa8.11□□□□□ -1.11
UBR1-202ENST00000546274 TCF4P15884 667 aa8.11□□□□□ -1.11
UBR1-202ENST00000546274 MAGEA4P43358 317 aa8.11□□□□□ -1.11
UBR1-202ENST00000546274 ALDH1A3P47895 512 aa8.11□□□□□ -1.11
UBR1-202ENST00000546274 TUBA4AP68366 448 aa8.11□□□□□ -1.11
UBR1-202ENST00000546274 GNA12Q03113 381 aa8.11□□□□□ -1.11
UBR1-202ENST00000546274 ENPEPQ07075 957 aa8.11□□□□□ -1.11
UBR1-202ENST00000546274 BNIP3Q12983 259 aa8.11□□□□□ -1.11
UBR1-202ENST00000546274 SNAPC2Q13487 334 aa8.11□□□□□ -1.11
UBR1-202ENST00000546274 HIC1Q14526 733 aa8.11□□□□□ -1.11
UBR1-202ENST00000546274 SPDYAQ5MJ70 313 aa8.11□□□□□ -1.11
UBR1-202ENST00000546274 TCHHL1Q5QJ38 904 aaPredicted RBP8.11□□□□□ -1.11
UBR1-202ENST00000546274 TDRD10Q5VZ19 366 aaKnown RBP8.11□□□□□ -1.11
UBR1-202ENST00000546274 IZUMO3Q5VZ72 239 aa8.11□□□□□ -1.11
UBR1-202ENST00000546274 TMC5Q6UXY8 1006 aa8.11□□□□□ -1.11
UBR1-202ENST00000546274 CYP4V2Q6ZWL3 525 aaPredicted RBP8.11□□□□□ -1.11
UBR1-202ENST00000546274 ENOSF1Q7L5Y1 443 aa8.11□□□□□ -1.11
UBR1-202ENST00000546274 TAS2R42Q7RTR8 314 aa8.11□□□□□ -1.11
UBR1-202ENST00000546274 ITIH5Q86UX2 942 aa8.11□□□□□ -1.11
UBR1-202ENST00000546274 ZNF677Q86XU0 584 aa8.11□□□□□ -1.11
UBR1-202ENST00000546274 CPXCR1Q8N123 301 aa8.11□□□□□ -1.11
UBR1-202ENST00000546274 MYO1HQ8N1T3 1032 aa8.11□□□□□ -1.11
UBR1-202ENST00000546274 ALLCQ8N6M5 410 aa8.11□□□□□ -1.11
UBR1-202ENST00000546274 OXNAD1Q96HP4 312 aaPredicted RBP8.11□□□□□ -1.11
UBR1-202ENST00000546274 PDCD2LQ9BRP1 358 aa8.11□□□□□ -1.11
UBR1-202ENST00000546274 ZNF341Q9BYN7 854 aa8.11□□□□□ -1.11
UBR1-202ENST00000546274 HAPLN2Q9GZV7 340 aa8.11□□□□□ -1.11
UBR1-202ENST00000546274 GPAMQ9HCL2 828 aa8.11□□□□□ -1.11
UBR1-202ENST00000546274 CCDC177Q9NQR7 707 aaPredicted RBP8.11□□□□□ -1.11
UBR1-202ENST00000546274 XPNPEP1Q9NQW7 623 aa8.11□□□□□ -1.11
UBR1-202ENST00000546274 PXMP2Q9NR77 195 aa8.11□□□□□ -1.11
UBR1-202ENST00000546274 ARHGEF4Q9NR80 690 aa8.11□□□□□ -1.11
UBR1-202ENST00000546274 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.11□□□□□ -1.11
UBR1-202ENST00000546274 NR2E3Q9Y5X4 410 aa8.11□□□□□ -1.11
UBR1-202ENST00000546274 ACTL7BQ9Y614 415 aa8.11□□□□□ -1.11
UBR1-202ENST00000546274 SOBPA7XYQ1 873 aa8.1□□□□□ -1.11
UBR1-202ENST00000546274 MYO1DO94832 1006 aa8.1□□□□□ -1.11
UBR1-202ENST00000546274 C4BPAP04003 597 aaKnown RBP8.1□□□□□ -1.11
UBR1-202ENST00000546274 KRT10P13645 584 aa8.1□□□□□ -1.11
UBR1-202ENST00000546274 P4HA1P13674 534 aa8.1□□□□□ -1.11
UBR1-202ENST00000546274 CD58P19256 250 aa8.1□□□□□ -1.11
UBR1-202ENST00000546274 SFNP31947 248 aa8.1□□□□□ -1.11
UBR1-202ENST00000546274 SSTR3P32745 418 aaPredicted RBP8.1□□□□□ -1.11
UBR1-202ENST00000546274 NR4A2P43354 598 aa8.1□□□□□ -1.11
UBR1-202ENST00000546274 MAPK10P53779 464 aa8.1□□□□□ -1.11
UBR1-202ENST00000546274 ALDH18A1P54886 795 aaKnown RBP8.1□□□□□ -1.11
UBR1-202ENST00000546274 CDH15P55291 814 aa8.1□□□□□ -1.11
UBR1-202ENST00000546274 RAB15P59190 212 aa8.1□□□□□ -1.11
UBR1-202ENST00000546274 RPS3AP61247 264 aaKnown RBP8.1□□□□□ -1.11
UBR1-202ENST00000546274 NOMO3P69849 1222 aa8.1□□□□□ -1.11
UBR1-202ENST00000546274 KRT76Q01546 638 aa8.1□□□□□ -1.11
UBR1-202ENST00000546274 TRABD2AQ86V40 505 aa8.1□□□□□ -1.11
UBR1-202ENST00000546274 ZCCHC9Q8N567 271 aaKnown RBP8.1□□□□□ -1.11
UBR1-202ENST00000546274 DENND1AQ8TEH3 1009 aa8.1□□□□□ -1.11
UBR1-202ENST00000546274 CHPT1Q8WUD6 406 aa8.1□□□□□ -1.11
UBR1-202ENST00000546274 HSPH1Q92598 858 aa8.1□□□□□ -1.11
UBR1-202ENST00000546274 TSSK1BQ9BXA7 367 aa8.1□□□□□ -1.11
UBR1-202ENST00000546274 VPS33BQ9H267 617 aa8.1□□□□□ -1.11
UBR1-202ENST00000546274 PLEKHA5Q9HAU0 1116 aa8.1□□□□□ -1.11
UBR1-202ENST00000546274 APOBEC3GQ9HC16 384 aaKnown RBP8.1□□□□□ -1.11
UBR1-202ENST00000546274 PCP4L1A6NKN8 68 aa8.1□□□□□ -1.11
UBR1-202ENST00000546274 CCRL2O00421 344 aa8.1□□□□□ -1.11
UBR1-202ENST00000546274 GIPC1O14908 333 aa8.1□□□□□ -1.11
UBR1-202ENST00000546274 MYCLP12524 364 aaPredicted RBP8.1□□□□□ -1.11
UBR1-202ENST00000546274 GARTP22102 1010 aa8.1□□□□□ -1.11
UBR1-202ENST00000546274 JAK1P23458 1154 aa8.1□□□□□ -1.11
UBR1-202ENST00000546274 OTUD4Q01804 1114 aaKnown RBP8.1□□□□□ -1.11
UBR1-202ENST00000546274 ZNF252P-AS1Q0IIN9 211 aa8.1□□□□□ -1.11
UBR1-202ENST00000546274 ZACNQ401N2 412 aa8.1□□□□□ -1.11
UBR1-202ENST00000546274 PRPF39Q86UA1 669 aaKnown RBP8.1□□□□□ -1.11
UBR1-202ENST00000546274 MMAAQ8IVH4 418 aaKnown RBP8.1□□□□□ -1.11
UBR1-202ENST00000546274 CADM3Q8N126 398 aa8.1□□□□□ -1.11
UBR1-202ENST00000546274 PCYOX1LQ8NBM8 494 aa8.1□□□□□ -1.11
UBR1-202ENST00000546274 TTC25Q96NG3 672 aa8.1□□□□□ -1.11
UBR1-202ENST00000546274 ACAP3Q96P50 834 aa8.1□□□□□ -1.11
UBR1-202ENST00000546274 BTBD9Q96Q07 612 aa8.1□□□□□ -1.11
UBR1-202ENST00000546274 C11orf70Q9BRQ4 267 aa8.1□□□□□ -1.11
UBR1-202ENST00000546274 CALN1Q9BXU9 219 aa8.1□□□□□ -1.11
UBR1-202ENST00000546274 C12orf4Q9NQ89 552 aa8.1□□□□□ -1.11
UBR1-202ENST00000546274 C1orf112Q9NSG2 853 aa8.1□□□□□ -1.11
UBR1-202ENST00000546274 ARHGAP28Q9P2N2 729 aa8.1□□□□□ -1.11
UBR1-202ENST00000546274 AGO2Q9UKV8 859 aaKnown RBP8.1□□□□□ -1.11
UBR1-202ENST00000546274 ZNF541Q9H0D2 1346 aa8.1□□□□□ -1.11
UBR1-202ENST00000546274 C1orf232A0A0U1RR37 186 aa8.09□□□□□ -1.11
UBR1-202ENST00000546274 CFAP99D6REC4 459 aa8.09□□□□□ -1.11
UBR1-202ENST00000546274 HNRNPDLO14979 420 aaKnown RBP8.09□□□□□ -1.11
UBR1-202ENST00000546274 MTRF1O75570 445 aaKnown RBP8.09□□□□□ -1.11
UBR1-202ENST00000546274 RGS20O76081 388 aa8.09□□□□□ -1.11
UBR1-202ENST00000546274 ABHD2P08910 425 aa8.09□□□□□ -1.11
UBR1-202ENST00000546274 CD48P09326 243 aa8.09□□□□□ -1.11
UBR1-202ENST00000546274 KITP10721 976 aa8.09□□□□□ -1.11
UBR1-202ENST00000546274 NSFP46459 744 aaKnown RBP8.09□□□□□ -1.11
UBR1-202ENST00000546274 BMXP51813 675 aa8.09□□□□□ -1.11
UBR1-202ENST00000546274 FASTKD3Q14CZ7 662 aaKnown RBP8.09□□□□□ -1.11
UBR1-202ENST00000546274 DLGAP5Q15398 846 aa8.09□□□□□ -1.11
UBR1-202ENST00000546274 SMU1Q2TAY7 513 aa8.09□□□□□ -1.11
UBR1-202ENST00000546274 ATP13A4Q4VNC1 1196 aa8.09□□□□□ -1.11
UBR1-202ENST00000546274 BRDTQ58F21 947 aaPredicted RBP8.09□□□□□ -1.11
UBR1-202ENST00000546274 RALGPS1Q5JS13 557 aa8.09□□□□□ -1.11
UBR1-202ENST00000546274 BORAQ6PGQ7 559 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms