RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 FTLP02792 175 aaPredicted RBP6.88□□□□□ -1.31
CDCA3-209ENST00000544610 CYP1A2P05177 515 aa6.88□□□□□ -1.31
CDCA3-209ENST00000544610 GLI1P08151 1106 aa6.88□□□□□ -1.31
CDCA3-209ENST00000544610 PLEKP08567 350 aaPredicted RBP6.88□□□□□ -1.31
CDCA3-209ENST00000544610 TCF3P15923 654 aa6.88□□□□□ -1.31
CDCA3-209ENST00000544610 PRLRP16471 622 aa6.88□□□□□ -1.31
CDCA3-209ENST00000544610 PTPN1P18031 435 aaKnown RBP6.88□□□□□ -1.31
CDCA3-209ENST00000544610 CYP2F1P24903 491 aa6.88□□□□□ -1.31
CDCA3-209ENST00000544610 USP8P40818 1118 aa6.88□□□□□ -1.31
CDCA3-209ENST00000544610 GPD2P43304 727 aa6.88□□□□□ -1.31
CDCA3-209ENST00000544610 MAGEA11P43364 429 aa6.88□□□□□ -1.31
CDCA3-209ENST00000544610 RPL10AP62906 217 aaKnown RBP6.88□□□□□ -1.31
CDCA3-209ENST00000544610 TSPY1Q01534 308 aa6.88□□□□□ -1.31
CDCA3-209ENST00000544610 ARID5AQ03989 594 aa6.88□□□□□ -1.31
CDCA3-209ENST00000544610 GFPT1Q06210 699 aaPredicted RBP6.88□□□□□ -1.31
CDCA3-209ENST00000544610 GOLGA8FQ08AF8 430 aa6.88□□□□□ -1.31
CDCA3-209ENST00000544610 GOLGA8DPQ0D2H9 430 aa6.88□□□□□ -1.31
CDCA3-209ENST00000544610 BST2Q10589 180 aaKnown RBP6.88□□□□□ -1.31
CDCA3-209ENST00000544610 DMC1Q14565 340 aa6.88□□□□□ -1.31
CDCA3-209ENST00000544610 ELF2Q15723 593 aa6.88□□□□□ -1.31
CDCA3-209ENST00000544610 EML3Q32P44 896 aa6.88□□□□□ -1.31
CDCA3-209ENST00000544610 INTS6LQ5JSJ4 861 aaKnown RBP6.88□□□□□ -1.31
CDCA3-209ENST00000544610 SDHAF4Q5VUM1 108 aa6.88□□□□□ -1.31
CDCA3-209ENST00000544610 RNF43Q68DV7 783 aa6.88□□□□□ -1.31
CDCA3-209ENST00000544610 PLEKHA7Q6IQ23 1121 aa6.88□□□□□ -1.31
CDCA3-209ENST00000544610 VSTM1Q6UX27 236 aa6.88□□□□□ -1.31
CDCA3-209ENST00000544610 TREML4Q6UXN2 200 aa6.88□□□□□ -1.31
CDCA3-209ENST00000544610 C4orf50Q6ZRC1 276 aa6.88□□□□□ -1.31
CDCA3-209ENST00000544610 TOGARAM2Q6ZUX3 1019 aa6.88□□□□□ -1.31
CDCA3-209ENST00000544610 MON1BQ7L1V2 547 aa6.88□□□□□ -1.31
CDCA3-209ENST00000544610 BEND5Q7L4P6 421 aa6.88□□□□□ -1.31
CDCA3-209ENST00000544610 TMEM110Q86TL2 294 aa6.88□□□□□ -1.31
CDCA3-209ENST00000544610 OR6B3Q8NGW1 331 aa6.88□□□□□ -1.31
CDCA3-209ENST00000544610 MYCBPAPQ8TBZ2 947 aa6.88□□□□□ -1.31
CDCA3-209ENST00000544610 KCTD13Q8WZ19 329 aa6.88□□□□□ -1.31
CDCA3-209ENST00000544610 CD101Q93033 1021 aa6.88□□□□□ -1.31
CDCA3-209ENST00000544610 ATP2A3Q93084 1043 aa6.88□□□□□ -1.31
CDCA3-209ENST00000544610 HEXIM2Q96MH2 286 aaKnown RBP6.88□□□□□ -1.31
CDCA3-209ENST00000544610 ZNF830Q96NB3 372 aaPredicted RBP6.88□□□□□ -1.31
CDCA3-209ENST00000544610 ALS2CR12Q96Q35 445 aa6.88□□□□□ -1.31
CDCA3-209ENST00000544610 SLC22A12Q96S37 553 aa6.88□□□□□ -1.31
CDCA3-209ENST00000544610 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.88□□□□□ -1.31
CDCA3-209ENST00000544610 EDEM2Q9BV94 578 aa6.88□□□□□ -1.31
CDCA3-209ENST00000544610 TRIM62Q9BVG3 475 aa6.88□□□□□ -1.31
CDCA3-209ENST00000544610 ELOVL4Q9GZR5 314 aa6.88□□□□□ -1.31
CDCA3-209ENST00000544610 ECT2Q9H8V3 914 aa6.88□□□□□ -1.31
CDCA3-209ENST00000544610 CSNK1G1Q9HCP0 422 aa6.88□□□□□ -1.31
CDCA3-209ENST00000544610 COMMD8Q9NX08 183 aa6.88□□□□□ -1.31
CDCA3-209ENST00000544610 DUS2Q9NX74 493 aaKnown RBP6.88□□□□□ -1.31
CDCA3-209ENST00000544610 KIAA1522Q9P206 1035 aaPredicted RBP6.88□□□□□ -1.31
CDCA3-209ENST00000544610 MAGED2Q9UNF1 606 aaPredicted RBP6.88□□□□□ -1.31
CDCA3-209ENST00000544610 PCDHB9Q9Y5E1 797 aa6.88□□□□□ -1.31
CDCA3-209ENST00000544610 KIAA1549LQ6ZVL6 1849 aa6.87□□□□□ -1.31
CDCA3-209ENST00000544610 USP24Q9UPU5 2620 aa6.87□□□□□ -1.31
CDCA3-209ENST00000544610 ACACBO00763 2458 aa6.87□□□□□ -1.31
CDCA3-209ENST00000544610 TRAV19A0A0A6YYK7 116 aa6.87□□□□□ -1.31
CDCA3-209ENST00000544610 LNP1A1A4G5 178 aa6.87□□□□□ -1.31
CDCA3-209ENST00000544610 BCLAF3A2AJT9 711 aaKnown RBP6.87□□□□□ -1.31
CDCA3-209ENST00000544610 CES2O00748 559 aa6.87□□□□□ -1.31
CDCA3-209ENST00000544610 XPO1O14980 1071 aaKnown RBP6.87□□□□□ -1.31
CDCA3-209ENST00000544610 DCLK1O15075 740 aa6.87□□□□□ -1.31
CDCA3-209ENST00000544610 RHOBTB1O94844 696 aa6.87□□□□□ -1.31
CDCA3-209ENST00000544610 FBXO21O94952 628 aa6.87□□□□□ -1.31
CDCA3-209ENST00000544610 ERBB2P04626 1255 aa6.87□□□□□ -1.31
CDCA3-209ENST00000544610 CKMP06732 381 aa6.87□□□□□ -1.31
CDCA3-209ENST00000544610 MMEP08473 750 aa6.87□□□□□ -1.31
CDCA3-209ENST00000544610 USP17L7P0C7H9 530 aa6.87□□□□□ -1.31
CDCA3-209ENST00000544610 CD58P19256 250 aa6.87□□□□□ -1.31
CDCA3-209ENST00000544610 ACAT1P24752 427 aaKnown RBP6.87□□□□□ -1.31
CDCA3-209ENST00000544610 MAN1A1P33908 653 aa6.87□□□□□ -1.31
CDCA3-209ENST00000544610 SLC1A1P43005 524 aa6.87□□□□□ -1.31
CDCA3-209ENST00000544610 PLA2G4AP47712 749 aa6.87□□□□□ -1.31
CDCA3-209ENST00000544610 IFNAR2P48551 515 aa6.87□□□□□ -1.31
CDCA3-209ENST00000544610 GALCP54803 685 aa6.87□□□□□ -1.31
CDCA3-209ENST00000544610 CDH8P55286 799 aa6.87□□□□□ -1.31
CDCA3-209ENST00000544610 TUBB4BP68371 445 aa6.87□□□□□ -1.31
CDCA3-209ENST00000544610 CREB5Q02930 508 aa6.87□□□□□ -1.31
CDCA3-209ENST00000544610 DDR2Q16832 855 aa6.87□□□□□ -1.31
CDCA3-209ENST00000544610 CCDC142Q17RM4 750 aa6.87□□□□□ -1.31
CDCA3-209ENST00000544610 PSAPL1Q6NUJ1 521 aa6.87□□□□□ -1.31
CDCA3-209ENST00000544610 C11orf63Q6NUN7 778 aa6.87□□□□□ -1.31
CDCA3-209ENST00000544610 SLFN11Q7Z7L1 901 aa6.87□□□□□ -1.31
CDCA3-209ENST00000544610 C11orf74Q86VG3 221 aa6.87□□□□□ -1.31
CDCA3-209ENST00000544610 OSTM1Q86WC4 334 aa6.87□□□□□ -1.31
CDCA3-209ENST00000544610 MCOLN2Q8IZK6 566 aa6.87□□□□□ -1.31
CDCA3-209ENST00000544610 PLPP7Q8NBV4 271 aa6.87□□□□□ -1.31
CDCA3-209ENST00000544610 C3orf20Q8ND61 904 aa6.87□□□□□ -1.31
CDCA3-209ENST00000544610 KIF18AQ8NI77 898 aa6.87□□□□□ -1.31
CDCA3-209ENST00000544610 CCDC26Q8TAB7 109 aa6.87□□□□□ -1.31
CDCA3-209ENST00000544610 IPO4Q8TEX9 1081 aaKnown RBP6.87□□□□□ -1.31
CDCA3-209ENST00000544610 SLC35F5Q8WV83 523 aa6.87□□□□□ -1.31
CDCA3-209ENST00000544610 TFAP2BQ92481 460 aa6.87□□□□□ -1.31
CDCA3-209ENST00000544610 CYFIP2Q96F07 1278 aa6.87□□□□□ -1.31
CDCA3-209ENST00000544610 CYP2S1Q96SQ9 504 aa6.87□□□□□ -1.31
CDCA3-209ENST00000544610 SYT15Q9BQS2 421 aa6.87□□□□□ -1.31
CDCA3-209ENST00000544610 MRPL45Q9BRJ2 306 aaKnown RBP6.87□□□□□ -1.31
CDCA3-209ENST00000544610 SLC4A5Q9BY07 1137 aa6.87□□□□□ -1.31
CDCA3-209ENST00000544610 DUSP16Q9BY84 665 aa6.87□□□□□ -1.31
CDCA3-209ENST00000544610 PDCL3Q9H2J4 239 aa6.87□□□□□ -1.31
CDCA3-209ENST00000544610 TRPC7Q9HCX4 862 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms