RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 NME8Q8N427 588 aa4.15□□□□□ -1.74
SCFD1-207ENST00000544052 SLC44A3Q8N4M1 653 aa4.15□□□□□ -1.74
SCFD1-207ENST00000544052 OVCA2Q8WZ82 227 aa4.15□□□□□ -1.74
SCFD1-207ENST00000544052 HDAC2Q92769 488 aaKnown RBP4.15□□□□□ -1.74
SCFD1-207ENST00000544052 TRMT61AQ96FX7 289 aaKnown RBP4.15□□□□□ -1.74
SCFD1-207ENST00000544052 LENG8Q96PV6 779 aaPredicted RBP4.15□□□□□ -1.74
SCFD1-207ENST00000544052 KRTAP3-1Q9BYR8 98 aa4.15□□□□□ -1.74
SCFD1-207ENST00000544052 WDR11Q9BZH6 1224 aa4.15□□□□□ -1.74
SCFD1-207ENST00000544052 ACAD9Q9H845 621 aa4.15□□□□□ -1.74
SCFD1-207ENST00000544052 KCNK9Q9NPC2 374 aa4.15□□□□□ -1.74
SCFD1-207ENST00000544052 TRIM36Q9NQ86 728 aa4.15□□□□□ -1.74
SCFD1-207ENST00000544052 PCF11O94913 1555 aaKnown RBP4.15□□□□□ -1.74
SCFD1-207ENST00000544052 CDC42BPAQ5VT25 1732 aa4.15□□□□□ -1.74
SCFD1-207ENST00000544052 HECW1Q76N89 1606 aa4.15□□□□□ -1.74
SCFD1-207ENST00000544052 CFAP74Q9C0B2 1584 aa4.15□□□□□ -1.75
SCFD1-207ENST00000544052 TBC1D3DA0A087WVF3 549 aa4.15□□□□□ -1.75
SCFD1-207ENST00000544052 TBC1D3IA0A087WXS9 549 aa4.15□□□□□ -1.75
SCFD1-207ENST00000544052 TBC1D3EA0A087X179 549 aa4.15□□□□□ -1.75
SCFD1-207ENST00000544052 TBC1D3KA0A087X1G2 549 aa4.15□□□□□ -1.75
SCFD1-207ENST00000544052 TBC1D3BA6NDS4 549 aa4.15□□□□□ -1.75
SCFD1-207ENST00000544052 TBC1D3FA6NER0 549 aaPredicted RBP4.15□□□□□ -1.75
SCFD1-207ENST00000544052 TBC1D3LB9A6J9 549 aa4.15□□□□□ -1.75
SCFD1-207ENST00000544052 NKX2-8O15522 239 aa4.15□□□□□ -1.75
SCFD1-207ENST00000544052 PEX1O43933 1283 aa4.15□□□□□ -1.75
SCFD1-207ENST00000544052 PRAMEF2O60811 474 aa4.15□□□□□ -1.75
SCFD1-207ENST00000544052 TBC1D3HP0C7X1 549 aa4.15□□□□□ -1.75
SCFD1-207ENST00000544052 FPR3P25089 353 aa4.15□□□□□ -1.75
SCFD1-207ENST00000544052 ADRA1DP25100 572 aa4.15□□□□□ -1.75
SCFD1-207ENST00000544052 IGHMBP2P38935 993 aaKnown RBP4.15□□□□□ -1.75
SCFD1-207ENST00000544052 CASP6P55212 293 aa4.15□□□□□ -1.75
SCFD1-207ENST00000544052 SUMO2P61956 95 aaKnown RBP4.15□□□□□ -1.75
SCFD1-207ENST00000544052 VAMP2P63027 116 aa4.15□□□□□ -1.75
SCFD1-207ENST00000544052 PSG6Q00889 435 aa4.15□□□□□ -1.75
SCFD1-207ENST00000544052 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.15□□□□□ -1.75
SCFD1-207ENST00000544052 TDGQ13569 410 aa4.15□□□□□ -1.75
SCFD1-207ENST00000544052 BMPR2Q13873 1038 aa4.15□□□□□ -1.75
SCFD1-207ENST00000544052 L1TD1Q5T7N2 865 aaKnown RBP4.15□□□□□ -1.75
SCFD1-207ENST00000544052 TEDDM1Q5T9Z0 273 aa4.15□□□□□ -1.75
SCFD1-207ENST00000544052 CCDC30Q5VVM6 783 aa4.15□□□□□ -1.75
SCFD1-207ENST00000544052 TBC1D3GQ6DHY5 549 aa4.15□□□□□ -1.75
SCFD1-207ENST00000544052 TBC1D3CQ6IPX1 549 aa4.15□□□□□ -1.75
SCFD1-207ENST00000544052 ACSM6Q6P461 480 aa4.15□□□□□ -1.75
SCFD1-207ENST00000544052 PTCHD4Q6ZW05 846 aa4.15□□□□□ -1.75
SCFD1-207ENST00000544052 Q6ZWC4 215 aa4.15□□□□□ -1.75
SCFD1-207ENST00000544052 TBC1D3Q8IZP1 549 aaPredicted RBP4.15□□□□□ -1.75
SCFD1-207ENST00000544052 SIRT6Q8N6T7 355 aa4.15□□□□□ -1.75
SCFD1-207ENST00000544052 UCMAQ8WVF2 138 aa4.15□□□□□ -1.75
SCFD1-207ENST00000544052 ZBTB10Q96DT7 871 aa4.15□□□□□ -1.75
SCFD1-207ENST00000544052 FAR2Q96K12 515 aa4.15□□□□□ -1.75
SCFD1-207ENST00000544052 PBKQ96KB5 322 aa4.15□□□□□ -1.75
SCFD1-207ENST00000544052 ELOVL1Q9BW60 279 aa4.15□□□□□ -1.75
SCFD1-207ENST00000544052 SERHL2Q9H4I8 314 aa4.15□□□□□ -1.75
SCFD1-207ENST00000544052 JMJD4Q9H9V9 463 aa4.15□□□□□ -1.75
SCFD1-207ENST00000544052 PREBQ9HCU5 417 aa4.15□□□□□ -1.75
SCFD1-207ENST00000544052 SWAP70Q9UH65 585 aa4.15□□□□□ -1.75
SCFD1-207ENST00000544052 AFG3L2Q9Y4W6 797 aa4.15□□□□□ -1.75
SCFD1-207ENST00000544052 PTPRMP28827 1452 aa4.14□□□□□ -1.75
SCFD1-207ENST00000544052 SUV39H1O43463 412 aa4.14□□□□□ -1.75
SCFD1-207ENST00000544052 ONECUT2O95948 504 aa4.14□□□□□ -1.75
SCFD1-207ENST00000544052 MBPP02686 304 aaPredicted RBP4.14□□□□□ -1.75
SCFD1-207ENST00000544052 LDHCP07864 332 aa4.14□□□□□ -1.75
SCFD1-207ENST00000544052 TMIGD3P0DMS9 266 aaPredicted RBP4.14□□□□□ -1.75
SCFD1-207ENST00000544052 ACP5P13686 325 aa4.14□□□□□ -1.75
SCFD1-207ENST00000544052 CHN1P15882 459 aa4.14□□□□□ -1.75
SCFD1-207ENST00000544052 CASP2P42575 452 aa4.14□□□□□ -1.75
SCFD1-207ENST00000544052 DIO1P49895 249 aa4.14□□□□□ -1.75
SCFD1-207ENST00000544052 RAE1P78406 368 aaKnown RBP4.14□□□□□ -1.75
SCFD1-207ENST00000544052 GALNT2Q10471 571 aa4.14□□□□□ -1.75
SCFD1-207ENST00000544052 PTPRRQ15256 657 aa4.14□□□□□ -1.75
SCFD1-207ENST00000544052 KAZNQ674X7 775 aa4.14□□□□□ -1.75
SCFD1-207ENST00000544052 RNF207Q6ZRF8 634 aa4.14□□□□□ -1.75
SCFD1-207ENST00000544052 RHOUQ7L0Q8 258 aa4.14□□□□□ -1.75
SCFD1-207ENST00000544052 TTC9BQ8N6N2 239 aa4.14□□□□□ -1.75
SCFD1-207ENST00000544052 FSIP1Q8NA03 581 aa4.14□□□□□ -1.75
SCFD1-207ENST00000544052 PROKR1Q8TCW9 393 aa4.14□□□□□ -1.75
SCFD1-207ENST00000544052 SLC2A12Q8TD20 617 aa4.14□□□□□ -1.75
SCFD1-207ENST00000544052 CACTINQ8WUQ7 758 aaKnown RBP4.14□□□□□ -1.75
SCFD1-207ENST00000544052 HAS1Q92839 578 aa4.14□□□□□ -1.75
SCFD1-207ENST00000544052 ARRDC3Q96B67 414 aa4.14□□□□□ -1.75
SCFD1-207ENST00000544052 CLPBQ9H078 707 aa4.14□□□□□ -1.75
SCFD1-207ENST00000544052 USP29Q9HBJ7 922 aa4.14□□□□□ -1.75
SCFD1-207ENST00000544052 ARHGEF3Q9NR81 526 aa4.14□□□□□ -1.75
SCFD1-207ENST00000544052 DUSP22Q9NRW4 184 aa4.14□□□□□ -1.75
SCFD1-207ENST00000544052 BLOC1S4Q9NUP1 217 aa4.14□□□□□ -1.75
SCFD1-207ENST00000544052 IRAK4Q9NWZ3 460 aa4.14□□□□□ -1.75
SCFD1-207ENST00000544052 YEATS2Q9ULM3 1422 aa4.14□□□□□ -1.75
SCFD1-207ENST00000544052 PIPSLA2A3N6 862 aa4.14□□□□□ -1.75
SCFD1-207ENST00000544052 DYTNA2CJ06 578 aa4.14□□□□□ -1.75
SCFD1-207ENST00000544052 MPPED1O15442 326 aa4.14□□□□□ -1.75
SCFD1-207ENST00000544052 KAT7O95251 611 aa4.14□□□□□ -1.75
SCFD1-207ENST00000544052 ADRB1P08588 477 aa4.14□□□□□ -1.75
SCFD1-207ENST00000544052 ZNF37AP17032 561 aaPredicted RBP4.14□□□□□ -1.75
SCFD1-207ENST00000544052 MAN1A1P33908 653 aa4.14□□□□□ -1.75
SCFD1-207ENST00000544052 GALNSP34059 522 aa4.14□□□□□ -1.75
SCFD1-207ENST00000544052 GRK5P34947 590 aa4.14□□□□□ -1.75
SCFD1-207ENST00000544052 FOLR3P41439 243 aa4.14□□□□□ -1.75
SCFD1-207ENST00000544052 MCM2P49736 904 aa4.14□□□□□ -1.75
SCFD1-207ENST00000544052 CCT4P50991 539 aaKnown RBP4.14□□□□□ -1.75
SCFD1-207ENST00000544052 RCAN1P53805 252 aa4.14□□□□□ -1.75
SCFD1-207ENST00000544052 TPTEP56180 551 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms