RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 RABGEF1Q9UJ41 708 aa17.81■□□□□ 0.44
TMEM50B-210ENST00000542230 ADAM12O43184 909 aa17.8■□□□□ 0.44
TMEM50B-210ENST00000542230 TRAPPC3O43617 180 aa17.8■□□□□ 0.44
TMEM50B-210ENST00000542230 GCATO75600 419 aa17.8■□□□□ 0.44
TMEM50B-210ENST00000542230 TBX18O95935 607 aa17.8■□□□□ 0.44
TMEM50B-210ENST00000542230 EIF4EBP2Q13542 120 aaPredicted RBP17.8■□□□□ 0.44
TMEM50B-210ENST00000542230 MRPL58Q14197 206 aaKnown RBP17.8■□□□□ 0.44
TMEM50B-210ENST00000542230 STAT4Q14765 748 aa17.8■□□□□ 0.44
TMEM50B-210ENST00000542230 LRRC14Q15048 493 aa17.8■□□□□ 0.44
TMEM50B-210ENST00000542230 VSTM1Q6UX27 236 aa17.8■□□□□ 0.44
TMEM50B-210ENST00000542230 ZNF534Q76KX8 674 aa17.8■□□□□ 0.44
TMEM50B-210ENST00000542230 SRRM1Q8IYB3 904 aaKnown RBP17.8■□□□□ 0.44
TMEM50B-210ENST00000542230 MPP5Q8N3R9 675 aa17.8■□□□□ 0.44
TMEM50B-210ENST00000542230 MGARPQ8TDB4 240 aa17.8■□□□□ 0.44
TMEM50B-210ENST00000542230 FBF1Q8TES7 1133 aa17.8■□□□□ 0.44
TMEM50B-210ENST00000542230 PNPLA8Q9NP80 782 aa17.8■□□□□ 0.44
TMEM50B-210ENST00000542230 CFAP69A5D8W1 941 aa17.8■□□□□ 0.44
TMEM50B-210ENST00000542230 CHADO15335 359 aa17.8■□□□□ 0.44
TMEM50B-210ENST00000542230 IGLV3-25P01717 112 aa17.8■□□□□ 0.44
TMEM50B-210ENST00000542230 RPL17P18621 184 aaKnown RBP17.8■□□□□ 0.44
TMEM50B-210ENST00000542230 WASHC5Q12768 1159 aa17.8■□□□□ 0.44
TMEM50B-210ENST00000542230 ANKRD20A2Q5SQ80 823 aa17.8■□□□□ 0.44
TMEM50B-210ENST00000542230 ANKRD20A1Q5TYW2 823 aa17.8■□□□□ 0.44
TMEM50B-210ENST00000542230 ANKRD20A3Q5VUR7 823 aa17.8■□□□□ 0.44
TMEM50B-210ENST00000542230 BTBD8Q5XKL5 378 aa17.8■□□□□ 0.44
TMEM50B-210ENST00000542230 FUT10Q6P4F1 479 aa17.8■□□□□ 0.44
TMEM50B-210ENST00000542230 RNF19BQ6ZMZ0 732 aa17.8■□□□□ 0.44
TMEM50B-210ENST00000542230 NPAS4Q8IUM7 802 aa17.8■□□□□ 0.44
TMEM50B-210ENST00000542230 MAML1Q92585 1016 aa17.8■□□□□ 0.44
TMEM50B-210ENST00000542230 CELF6Q96J87 481 aaKnown RBP17.8■□□□□ 0.44
TMEM50B-210ENST00000542230 C5orf60A6NFR6 353 aa17.79■□□□□ 0.44
TMEM50B-210ENST00000542230 E7EVH7 732 aa17.79■□□□□ 0.44
TMEM50B-210ENST00000542230 RNF103O00237 685 aa17.79■□□□□ 0.44
TMEM50B-210ENST00000542230 COL6A1P12109 1028 aa17.79■□□□□ 0.44
TMEM50B-210ENST00000542230 EPHB2P29323 1055 aa17.79■□□□□ 0.44
TMEM50B-210ENST00000542230 PAFAH1B3Q15102 231 aaKnown RBP17.79■□□□□ 0.44
TMEM50B-210ENST00000542230 PRKD1Q15139 912 aaPredicted RBP17.79■□□□□ 0.44
TMEM50B-210ENST00000542230 ARTNQ5T4W7 220 aa17.79■□□□□ 0.44
TMEM50B-210ENST00000542230 TTC25Q96NG3 672 aa17.79■□□□□ 0.44
TMEM50B-210ENST00000542230 TEX264Q9Y6I9 313 aa17.79■□□□□ 0.44
TMEM50B-210ENST00000542230 PATJQ8NI35 1801 aa17.79■□□□□ 0.44
TMEM50B-210ENST00000542230 RANBP2P49792 3224 aaKnown RBP17.79■□□□□ 0.44
TMEM50B-210ENST00000542230 CDH16O75309 829 aa17.79■□□□□ 0.44
TMEM50B-210ENST00000542230 MOCS2O96007 188 aaPredicted RBP17.79■□□□□ 0.44
TMEM50B-210ENST00000542230 FGFR3P22607 806 aa17.79■□□□□ 0.44
TMEM50B-210ENST00000542230 PAX3P23760 479 aa17.79■□□□□ 0.44
TMEM50B-210ENST00000542230 SF3A3Q12874 501 aaKnown RBP eCLIP17.79■□□□□ 0.44
TMEM50B-210ENST00000542230 PKN2Q16513 984 aaKnown RBP17.79■□□□□ 0.44
TMEM50B-210ENST00000542230 PALM2Q8IXS6 379 aa17.79■□□□□ 0.44
TMEM50B-210ENST00000542230 DCP1BQ8IZD4 617 aaKnown RBP17.79■□□□□ 0.44
TMEM50B-210ENST00000542230 ATXN2LQ8WWM7 1075 aaKnown RBP17.79■□□□□ 0.44
TMEM50B-210ENST00000542230 KLC2Q9H0B6 622 aa17.79■□□□□ 0.44
TMEM50B-210ENST00000542230 EPN3Q9H201 632 aa17.79■□□□□ 0.44
TMEM50B-210ENST00000542230 GMIPQ9P107 970 aa17.79■□□□□ 0.44
TMEM50B-210ENST00000542230 NEU3Q9UQ49 428 aa17.79■□□□□ 0.44
TMEM50B-210ENST00000542230 COL4A4P53420 1690 aaPredicted RBP17.78■□□□□ 0.44
TMEM50B-210ENST00000542230 BPTFQ12830 3046 aa17.78■□□□□ 0.44
TMEM50B-210ENST00000542230 TMEM120BA0PK00 339 aa17.78■□□□□ 0.44
TMEM50B-210ENST00000542230 ARHGEF37A1IGU5 675 aa17.78■□□□□ 0.44
TMEM50B-210ENST00000542230 SYN3O14994 580 aa17.78■□□□□ 0.44
TMEM50B-210ENST00000542230 IRAK2O43187 625 aa17.78■□□□□ 0.44
TMEM50B-210ENST00000542230 F9P00740 461 aa17.78■□□□□ 0.44
TMEM50B-210ENST00000542230 IFNAR2P48551 515 aa17.78■□□□□ 0.44
TMEM50B-210ENST00000542230 CCT5P48643 541 aa17.78■□□□□ 0.44
TMEM50B-210ENST00000542230 ARL13BQ3SXY8 428 aa17.78■□□□□ 0.44
TMEM50B-210ENST00000542230 FAM117BQ6P1L5 589 aa17.78■□□□□ 0.44
TMEM50B-210ENST00000542230 ARHGEF18Q6ZSZ5 1173 aa17.78■□□□□ 0.44
TMEM50B-210ENST00000542230 ANKRD33Q7Z3H0 272 aa17.78■□□□□ 0.44
TMEM50B-210ENST00000542230 PRPF39Q86UA1 669 aaKnown RBP17.78■□□□□ 0.44
TMEM50B-210ENST00000542230 ZNF567Q8N184 647 aa17.78■□□□□ 0.44
TMEM50B-210ENST00000542230 VPS52Q8N1B4 723 aa17.78■□□□□ 0.44
TMEM50B-210ENST00000542230 CFAP36Q96G28 342 aa17.78■□□□□ 0.44
TMEM50B-210ENST00000542230 ABCC13Q9NSE7 274 aa17.78■□□□□ 0.44
TMEM50B-210ENST00000542230 NDFIP2Q9NV92 336 aa17.78■□□□□ 0.44
TMEM50B-210ENST00000542230 LGALS13Q9UHV8 139 aa17.78■□□□□ 0.44
TMEM50B-210ENST00000542230 SHROOM3Q8TF72 1996 aa17.78■□□□□ 0.44
TMEM50B-210ENST00000542230 CPB1P15086 417 aa17.77■□□□□ 0.44
TMEM50B-210ENST00000542230 CRADDP78560 199 aa17.77■□□□□ 0.44
TMEM50B-210ENST00000542230 RWDD4Q6NW29 188 aaKnown RBP17.77■□□□□ 0.44
TMEM50B-210ENST00000542230 SCML4Q8N228 414 aa17.77■□□□□ 0.44
TMEM50B-210ENST00000542230 ANKRD42Q8N9B4 389 aa17.77■□□□□ 0.44
TMEM50B-210ENST00000542230 COLGALT1Q8NBJ5 622 aa17.77■□□□□ 0.44
TMEM50B-210ENST00000542230 XPO6Q96QU8 1125 aaKnown RBP17.77■□□□□ 0.44
TMEM50B-210ENST00000542230 CCDC77Q9BR77 488 aa17.77■□□□□ 0.44
TMEM50B-210ENST00000542230 VN1R3Q9BXE9 311 aa17.77■□□□□ 0.44
TMEM50B-210ENST00000542230 KCNK9Q9NPC2 374 aa17.77■□□□□ 0.44
TMEM50B-210ENST00000542230 ATP11BQ9Y2G3 1177 aa17.77■□□□□ 0.44
TMEM50B-210ENST00000542230 PCDHB5Q9Y5E4 795 aa17.77■□□□□ 0.44
TMEM50B-210ENST00000542230 MYO16Q9Y6X6 1858 aa17.77■□□□□ 0.44
TMEM50B-210ENST00000542230 FNDC1Q4ZHG4 1894 aaPredicted RBP17.77■□□□□ 0.44
TMEM50B-210ENST00000542230 A0A0A0MRY4 1105 aa17.77■□□□□ 0.44
TMEM50B-210ENST00000542230 A0A1W2PPM1 405 aa17.77■□□□□ 0.44
TMEM50B-210ENST00000542230 PAGE1O75459 146 aa17.77■□□□□ 0.44
TMEM50B-210ENST00000542230 CXCL10P02778 98 aa17.77■□□□□ 0.44
TMEM50B-210ENST00000542230 ITGB8P26012 769 aa17.77■□□□□ 0.44
TMEM50B-210ENST00000542230 DUSP4Q13115 394 aa17.77■□□□□ 0.44
TMEM50B-210ENST00000542230 SPARCL1Q14515 664 aa17.77■□□□□ 0.44
TMEM50B-210ENST00000542230 QPCTQ16769 361 aa17.77■□□□□ 0.44
TMEM50B-210ENST00000542230 ARHGAP36Q6ZRI8 547 aa17.77■□□□□ 0.44
TMEM50B-210ENST00000542230 NLRP14Q86W24 1093 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 230.4 ms