RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 YIPF1Q9Y548 306 aa25.36■■□□□ 1.65
TTC3-225ENST00000540756 NR2C2P49116 596 aa25.35■■□□□ 1.65
TTC3-225ENST00000540756 GAD2Q05329 585 aa25.35■■□□□ 1.65
TTC3-225ENST00000540756 C10orf120Q5SQS8 335 aa25.35■■□□□ 1.65
TTC3-225ENST00000540756 TPGS2Q68CL5 300 aa25.35■■□□□ 1.65
TTC3-225ENST00000540756 CCHCR1Q8TD31 782 aa25.35■■□□□ 1.65
TTC3-225ENST00000540756 HERVK_113Q902F9 699 aa25.35■■□□□ 1.65
TTC3-225ENST00000540756 FCRL2Q96LA5 508 aaPredicted RBP25.35■■□□□ 1.65
TTC3-225ENST00000540756 SEMA4AQ9H3S1 761 aa25.35■■□□□ 1.65
TTC3-225ENST00000540756 ALG13Q9NP73 1137 aaKnown RBP25.35■■□□□ 1.65
TTC3-225ENST00000540756 TPX2Q9ULW0 747 aaKnown RBP25.35■■□□□ 1.65
TTC3-225ENST00000540756 SYF2O95926 243 aaKnown RBP25.34■■□□□ 1.65
TTC3-225ENST00000540756 HMBSP08397 361 aa25.34■■□□□ 1.65
TTC3-225ENST00000540756 ATP2A2P16615 1042 aaKnown RBP25.34■■□□□ 1.65
TTC3-225ENST00000540756 EPHB2P29323 1055 aa25.34■■□□□ 1.65
TTC3-225ENST00000540756 BRMS1LQ5PSV4 323 aa25.34■■□□□ 1.65
TTC3-225ENST00000540756 CFAP58Q5T655 872 aa25.34■■□□□ 1.65
TTC3-225ENST00000540756 RNASEH2BQ5TBB1 312 aaKnown RBP25.34■■□□□ 1.65
TTC3-225ENST00000540756 ANKRD22Q5VYY1 191 aa25.34■■□□□ 1.65
TTC3-225ENST00000540756 SLC39A13Q96H72 371 aa25.34■■□□□ 1.65
TTC3-225ENST00000540756 RAD9AQ99638 391 aa25.34■■□□□ 1.65
TTC3-225ENST00000540756 TLR6Q9Y2C9 796 aa25.34■■□□□ 1.65
TTC3-225ENST00000540756 BCLAF3A2AJT9 711 aaKnown RBP25.34■■□□□ 1.65
TTC3-225ENST00000540756 TLL1O43897 1013 aa25.34■■□□□ 1.65
TTC3-225ENST00000540756 CNPP09543 421 aaKnown RBP25.34■■□□□ 1.65
TTC3-225ENST00000540756 STIP1P31948 543 aaKnown RBP25.34■■□□□ 1.65
TTC3-225ENST00000540756 PPP2R5DQ14738 602 aa25.34■■□□□ 1.65
TTC3-225ENST00000540756 SYCP2LQ5T4T6 812 aa25.34■■□□□ 1.65
TTC3-225ENST00000540756 KRT222Q8N1A0 295 aa25.34■■□□□ 1.65
TTC3-225ENST00000540756 OSBPL2Q9H1P3 480 aa25.34■■□□□ 1.65
TTC3-225ENST00000540756 LRRC4CQ9HCJ2 640 aa25.34■■□□□ 1.65
TTC3-225ENST00000540756 PLAAQ9Y263 795 aa25.34■■□□□ 1.65
TTC3-225ENST00000540756 CEP290O15078 2479 aa25.34■■□□□ 1.65
TTC3-225ENST00000540756 TCRBV7S3A2A0A539 114 aa25.33■■□□□ 1.65
TTC3-225ENST00000540756 TLR5O60602 858 aa25.33■■□□□ 1.65
TTC3-225ENST00000540756 VAV1P15498 845 aa25.33■■□□□ 1.65
TTC3-225ENST00000540756 PMS2P54278 862 aa25.33■■□□□ 1.65
TTC3-225ENST00000540756 TBX4P57082 545 aa25.33■■□□□ 1.65
TTC3-225ENST00000540756 PAFAH1B3Q15102 231 aaKnown RBP25.33■■□□□ 1.65
TTC3-225ENST00000540756 SLC45A4Q5BKX6 768 aa25.33■■□□□ 1.65
TTC3-225ENST00000540756 C14orf80Q86SX3 495 aa25.33■■□□□ 1.65
TTC3-225ENST00000540756 CPT1BQ92523 772 aa25.33■■□□□ 1.65
TTC3-225ENST00000540756 HAPLN3Q96S86 360 aa25.33■■□□□ 1.65
TTC3-225ENST00000540756 EPAS1Q99814 870 aa25.33■■□□□ 1.65
TTC3-225ENST00000540756 COMMD8Q9NX08 183 aa25.33■■□□□ 1.65
TTC3-225ENST00000540756 MARCH2Q9P0N8 246 aa25.33■■□□□ 1.65
TTC3-225ENST00000540756 HS3ST4Q9Y661 456 aa25.33■■□□□ 1.65
TTC3-225ENST00000540756 MYO18AQ92614 2054 aaKnown RBP25.33■■□□□ 1.65
TTC3-225ENST00000540756 PRRG1O14668 218 aa25.32■■□□□ 1.64
TTC3-225ENST00000540756 CTSAP10619 480 aa25.32■■□□□ 1.64
TTC3-225ENST00000540756 MYOGP15173 224 aa25.32■■□□□ 1.64
TTC3-225ENST00000540756 HCAR3P49019 387 aa25.32■■□□□ 1.64
TTC3-225ENST00000540756 CBX1P83916 185 aa25.32■■□□□ 1.64
TTC3-225ENST00000540756 TWF1Q12792 350 aa25.32■■□□□ 1.64
TTC3-225ENST00000540756 RWDD4Q6NW29 188 aaKnown RBP25.32■■□□□ 1.64
TTC3-225ENST00000540756 CCDC110Q8TBZ0 833 aa25.32■■□□□ 1.64
TTC3-225ENST00000540756 ZNF512Q96ME7 567 aaPredicted RBP25.32■■□□□ 1.64
TTC3-225ENST00000540756 QKIQ96PU8 341 aaKnown RBP eCLIP25.32■■□□□ 1.643e-11■■■□□ 16.4
TTC3-225ENST00000540756 UBE2OQ9C0C9 1292 aaKnown RBP25.32■■□□□ 1.64
TTC3-225ENST00000540756 GOLGA8MH3BSY2 632 aa25.32■■□□□ 1.64
TTC3-225ENST00000540756 ARHGEF15O94989 841 aa25.32■■□□□ 1.64
TTC3-225ENST00000540756 PSEN1P49768 467 aa25.32■■□□□ 1.64
TTC3-225ENST00000540756 XRCC4Q13426 336 aa25.32■■□□□ 1.64
TTC3-225ENST00000540756 PIK3R6Q5UE93 754 aa25.32■■□□□ 1.64
TTC3-225ENST00000540756 SP7Q8TDD2 431 aaPredicted RBP25.32■■□□□ 1.64
TTC3-225ENST00000540756 FARP1Q9Y4F1 1045 aaPredicted RBP25.32■■□□□ 1.64
TTC3-225ENST00000540756 H0YGN5 161 aa25.31■■□□□ 1.64
TTC3-225ENST00000540756 ALDH1A3P47895 512 aa25.31■■□□□ 1.64
TTC3-225ENST00000540756 ERVFC1P60507 584 aa25.31■■□□□ 1.64
TTC3-225ENST00000540756 ALS2CLQ60I27 953 aa25.31■■□□□ 1.64
TTC3-225ENST00000540756 BBOF1Q8ND07 529 aa25.31■■□□□ 1.64
TTC3-225ENST00000540756 RTP4Q96DX8 246 aa25.31■■□□□ 1.64
TTC3-225ENST00000540756 FAM129AQ9BZQ8 928 aa25.31■■□□□ 1.64
TTC3-225ENST00000540756 PRDM12Q9H4Q4 367 aa25.31■■□□□ 1.64
TTC3-225ENST00000540756 NFS1Q9Y697 457 aa25.31■■□□□ 1.64
TTC3-225ENST00000540756 SLC12A8A0AV02 714 aa25.3■■□□□ 1.64
TTC3-225ENST00000540756 ZNF840PA6NDX5 716 aa25.3■■□□□ 1.64
TTC3-225ENST00000540756 OAS2P29728 719 aaKnown RBP25.3■■□□□ 1.64
TTC3-225ENST00000540756 CAV1Q03135 178 aa25.3■■□□□ 1.64
TTC3-225ENST00000540756 PLD1Q13393 1074 aa25.3■■□□□ 1.64
TTC3-225ENST00000540756 FAXCQ5TGI0 409 aa25.3■■□□□ 1.64
TTC3-225ENST00000540756 CDKL3Q8IVW4 592 aaPredicted RBP25.3■■□□□ 1.64
TTC3-225ENST00000540756 TFB1MQ8WVM0 346 aaKnown RBP25.3■■□□□ 1.64
TTC3-225ENST00000540756 PRCCQ92733 491 aaPredicted RBP25.3■■□□□ 1.64
TTC3-225ENST00000540756 HSFX1Q9UBD0 423 aa25.3■■□□□ 1.64
TTC3-225ENST00000540756 SHROOM3Q8TF72 1996 aa25.3■■□□□ 1.64
TTC3-225ENST00000540756 TGM5O43548 720 aa25.3■■□□□ 1.64
TTC3-225ENST00000540756 CXCL14O95715 111 aa25.3■■□□□ 1.64
TTC3-225ENST00000540756 DNAJB1P25685 340 aa25.3■■□□□ 1.64
TTC3-225ENST00000540756 BASP1P80723 227 aaKnown RBP25.3■■□□□ 1.64
TTC3-225ENST00000540756 AP1B1Q10567 949 aa25.3■■□□□ 1.64
TTC3-225ENST00000540756 MTM1Q13496 603 aa25.3■■□□□ 1.64
TTC3-225ENST00000540756 MANEALQ5VSG8 457 aa25.3■■□□□ 1.64
TTC3-225ENST00000540756 TMC7Q7Z402 723 aa25.3■■□□□ 1.64
TTC3-225ENST00000540756 UHMK1Q8TAS1 419 aaKnown RBP25.3■■□□□ 1.64
TTC3-225ENST00000540756 DEPDC1BQ8WUY9 529 aa25.3■■□□□ 1.64
TTC3-225ENST00000540756 CELF6Q96J87 481 aaKnown RBP25.3■■□□□ 1.64
TTC3-225ENST00000540756 CEP41Q9BYV8 373 aa25.3■■□□□ 1.64
TTC3-225ENST00000540756 RXFP1Q9HBX9 757 aa25.3■■□□□ 1.64
TTC3-225ENST00000540756 FNIP2Q9P278 1114 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms