RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 PTPRAP18433 802 aa14.89□□□□□ -0.03
CACNB1-206ENST00000539338 ALDH5A1P51649 535 aaPredicted RBP14.89□□□□□ -0.03
CACNB1-206ENST00000539338 ZCCHC9Q8N567 271 aaKnown RBP14.89□□□□□ -0.03
CACNB1-206ENST00000539338 ALDH1A2O94788 518 aa14.89□□□□□ -0.03
CACNB1-206ENST00000539338 MZF1P28698 734 aaPredicted RBP14.89□□□□□ -0.03
CACNB1-206ENST00000539338 NFYCQ13952 458 aa14.89□□□□□ -0.03
CACNB1-206ENST00000539338 CRYMQ14894 314 aa14.89□□□□□ -0.03
CACNB1-206ENST00000539338 AGKQ53H12 422 aa14.89□□□□□ -0.03
CACNB1-206ENST00000539338 ANKS3Q6ZW76 656 aa14.89□□□□□ -0.03
CACNB1-206ENST00000539338 REPS2Q8NFH8 660 aa14.89□□□□□ -0.03
CACNB1-206ENST00000539338 PHF21BQ96EK2 531 aa14.89□□□□□ -0.03
CACNB1-206ENST00000539338 HES6Q96HZ4 224 aa14.89□□□□□ -0.03
CACNB1-206ENST00000539338 KLHL4Q9C0H6 718 aa14.89□□□□□ -0.03
CACNB1-206ENST00000539338 E5RJQ4 531 aa14.89□□□□□ -0.03
CACNB1-206ENST00000539338 PSMC3P17980 439 aa14.89□□□□□ -0.03
CACNB1-206ENST00000539338 CLK1P49759 484 aaKnown RBP14.89□□□□□ -0.03
CACNB1-206ENST00000539338 GRIK4Q16099 956 aa14.89□□□□□ -0.03
CACNB1-206ENST00000539338 TCHHL1Q5QJ38 904 aaPredicted RBP14.89□□□□□ -0.03
CACNB1-206ENST00000539338 ZNF280DQ6N043 979 aa14.89□□□□□ -0.03
CACNB1-206ENST00000539338 UGT3A1Q6NUS8 523 aa14.89□□□□□ -0.03
CACNB1-206ENST00000539338 ZPBP2Q6X784 338 aa14.89□□□□□ -0.03
CACNB1-206ENST00000539338 P3H2Q8IVL5 708 aa14.89□□□□□ -0.03
CACNB1-206ENST00000539338 KATNAL2Q8IYT4 538 aa14.89□□□□□ -0.03
CACNB1-206ENST00000539338 MIER2Q8N344 545 aa14.89□□□□□ -0.03
CACNB1-206ENST00000539338 BTBD10Q9BSF8 475 aa14.89□□□□□ -0.03
CACNB1-206ENST00000539338 TCF7L2Q9NQB0 619 aa14.89□□□□□ -0.03
CACNB1-206ENST00000539338 RNF19AQ9NV58 838 aa14.89□□□□□ -0.03
CACNB1-206ENST00000539338 SCN3BQ9NY72 215 aa14.89□□□□□ -0.03
CACNB1-206ENST00000539338 PCDHAC2Q9Y5I4 1007 aa14.89□□□□□ -0.03
CACNB1-206ENST00000539338 RPTORQ8N122 1335 aa14.89□□□□□ -0.03
CACNB1-206ENST00000539338 CNTNAP2Q9UHC6 1331 aa14.89□□□□□ -0.03
CACNB1-206ENST00000539338 VIRMAQ69YN4 1812 aaKnown RBP14.89□□□□□ -0.03
CACNB1-206ENST00000539338 SLC12A8A0AV02 714 aa14.89□□□□□ -0.03
CACNB1-206ENST00000539338 ACKR2O00590 384 aa14.89□□□□□ -0.03
CACNB1-206ENST00000539338 RBL1P28749 1068 aa14.89□□□□□ -0.03
CACNB1-206ENST00000539338 RPA3P35244 121 aaPredicted RBP14.89□□□□□ -0.03
CACNB1-206ENST00000539338 LHX1P48742 406 aa14.89□□□□□ -0.03
CACNB1-206ENST00000539338 OTOAQ7RTW8 1153 aa14.89□□□□□ -0.03
CACNB1-206ENST00000539338 DTNBP1Q96EV8 351 aa14.89□□□□□ -0.03
CACNB1-206ENST00000539338 HIC2Q96JB3 615 aa14.89□□□□□ -0.03
CACNB1-206ENST00000539338 TBCBQ99426 244 aa14.89□□□□□ -0.03
CACNB1-206ENST00000539338 EIF3LQ9Y262 564 aaKnown RBP14.89□□□□□ -0.03
CACNB1-206ENST00000539338 ERI2A8K979 691 aaKnown RBP14.88□□□□□ -0.03
CACNB1-206ENST00000539338 GOLGA8TH3BQL2 631 aa14.88□□□□□ -0.03
CACNB1-206ENST00000539338 ASS1P00966 412 aaKnown RBP14.88□□□□□ -0.03
CACNB1-206ENST00000539338 DDX5P17844 614 aaKnown RBP14.88□□□□□ -0.03
CACNB1-206ENST00000539338 S100A5P33763 92 aa14.88□□□□□ -0.03
CACNB1-206ENST00000539338 RRP1BQ14684 758 aaKnown RBP14.88□□□□□ -0.03
CACNB1-206ENST00000539338 ATP13A4Q4VNC1 1196 aa14.88□□□□□ -0.03
CACNB1-206ENST00000539338 ATAT1Q5SQI0 421 aa14.88□□□□□ -0.03
CACNB1-206ENST00000539338 ZNF467Q7Z7K2 595 aaPredicted RBP14.88□□□□□ -0.03
CACNB1-206ENST00000539338 SYT15Q9BQS2 421 aa14.88□□□□□ -0.03
CACNB1-206ENST00000539338 UTP6Q9NYH9 597 aaKnown RBP14.88□□□□□ -0.03
CACNB1-206ENST00000539338 SPASTQ9UBP0 616 aa14.88□□□□□ -0.03
CACNB1-206ENST00000539338 REXO2Q9Y3B8 237 aaKnown RBP14.88□□□□□ -0.03
CACNB1-206ENST00000539338 SPTLC1O15269 473 aa14.88□□□□□ -0.03
CACNB1-206ENST00000539338 ARMC6Q6NXE6 501 aa14.88□□□□□ -0.03
CACNB1-206ENST00000539338 KCNT2Q6UVM3 1135 aa14.88□□□□□ -0.03
CACNB1-206ENST00000539338 SEMA4DQ92854 862 aa14.88□□□□□ -0.03
CACNB1-206ENST00000539338 PURBQ96QR8 312 aaKnown RBP14.88□□□□□ -0.03
CACNB1-206ENST00000539338 PIF1Q9H611 641 aa14.88□□□□□ -0.03
CACNB1-206ENST00000539338 DRG1Q9Y295 367 aaKnown RBP14.88□□□□□ -0.03
CACNB1-206ENST00000539338 GAKO14976 1311 aa14.88□□□□□ -0.03
CACNB1-206ENST00000539338 LTBP3Q9NS15 1303 aa14.88□□□□□ -0.03
CACNB1-206ENST00000539338 SERPINE1P05121 402 aa14.88□□□□□ -0.03
CACNB1-206ENST00000539338 RBP1P09455 135 aa14.88□□□□□ -0.03
CACNB1-206ENST00000539338 GP5P40197 560 aa14.88□□□□□ -0.03
CACNB1-206ENST00000539338 ITGB3BPQ13352 177 aaPredicted RBP14.88□□□□□ -0.03
CACNB1-206ENST00000539338 DPYSL3Q14195 570 aa14.88□□□□□ -0.03
CACNB1-206ENST00000539338 ECM1Q16610 540 aa14.88□□□□□ -0.03
CACNB1-206ENST00000539338 TRMT5Q32P41 509 aaKnown RBP14.88□□□□□ -0.03
CACNB1-206ENST00000539338 IFNL1Q8IU54 200 aa14.88□□□□□ -0.03
CACNB1-206ENST00000539338 TMPRSS6Q8IU80 811 aa14.88□□□□□ -0.03
CACNB1-206ENST00000539338 MICU2Q8IYU8 434 aa14.88□□□□□ -0.03
CACNB1-206ENST00000539338 DEFB106AQ8N104 65 aa14.88□□□□□ -0.03
CACNB1-206ENST00000539338 VPS37AQ8NEZ2 397 aa14.88□□□□□ -0.03
CACNB1-206ENST00000539338 DNAJB3Q8WWF6 145 aa14.88□□□□□ -0.03
CACNB1-206ENST00000539338 PRCCQ92733 491 aaPredicted RBP14.88□□□□□ -0.03
CACNB1-206ENST00000539338 TLE6Q9H808 572 aa14.88□□□□□ -0.03
CACNB1-206ENST00000539338 DSEQ9UL01 958 aa14.88□□□□□ -0.03
CACNB1-206ENST00000539338 HCN4Q9Y3Q4 1203 aa14.88□□□□□ -0.03
CACNB1-206ENST00000539338 RNF103O00237 685 aa14.88□□□□□ -0.03
CACNB1-206ENST00000539338 NDUFS2O75306 463 aa14.88□□□□□ -0.03
CACNB1-206ENST00000539338 EIF4BP23588 611 aaKnown RBP14.88□□□□□ -0.03
CACNB1-206ENST00000539338 OXCT1P55809 520 aa14.88□□□□□ -0.03
CACNB1-206ENST00000539338 TRIM60Q495X7 471 aa14.88□□□□□ -0.03
CACNB1-206ENST00000539338 KCNMB4Q86W47 210 aa14.88□□□□□ -0.03
CACNB1-206ENST00000539338 TNIP2Q8NFZ5 429 aa14.88□□□□□ -0.03
CACNB1-206ENST00000539338 SLC2A14Q8TDB8 520 aa14.88□□□□□ -0.03
CACNB1-206ENST00000539338 A1CFQ9NQ94 594 aaKnown RBP14.88□□□□□ -0.03
CACNB1-206ENST00000539338 MRPL17Q9NRX2 175 aaKnown RBP14.88□□□□□ -0.03
CACNB1-206ENST00000539338 USP12O75317 370 aa14.87□□□□□ -0.03
CACNB1-206ENST00000539338 SMNDC1O75940 238 aaKnown RBP eCLIP14.87□□□□□ -0.03
CACNB1-206ENST00000539338 YWHAZP63104 245 aaKnown RBP14.87□□□□□ -0.03
CACNB1-206ENST00000539338 MAMLD1Q13495 774 aa14.87□□□□□ -0.03
CACNB1-206ENST00000539338 CTXN3Q4LDR2 81 aa14.87□□□□□ -0.03
CACNB1-206ENST00000539338 TJAP1Q5JTD0 557 aa14.87□□□□□ -0.03
CACNB1-206ENST00000539338 CACHD1Q5VU97 1274 aa14.87□□□□□ -0.03
CACNB1-206ENST00000539338 TFAP2DQ7Z6R9 452 aa14.87□□□□□ -0.03
CACNB1-206ENST00000539338 RNF148Q8N7C7 305 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms