RNA–Protein interactions for RNA: ENST00000538129.1

DDB1-210, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-210ENST00000538129 PSMG2Q969U7 264 aa6.28□□□□□ -1.4
DDB1-210ENST00000538129 MYLPFQ96A32 169 aa6.28□□□□□ -1.4
DDB1-210ENST00000538129 ACSF2Q96CM8 615 aaPredicted RBP6.28□□□□□ -1.4
DDB1-210ENST00000538129 CYFIP2Q96F07 1278 aa6.28□□□□□ -1.4
DDB1-210ENST00000538129 TMEM176AQ96HP8 235 aa6.28□□□□□ -1.4
DDB1-210ENST00000538129 SPATA17Q96L03 361 aa6.28□□□□□ -1.4
DDB1-210ENST00000538129 C8orf48Q96LL4 319 aa6.28□□□□□ -1.4
DDB1-210ENST00000538129 CCDC74BQ96LY2 380 aa6.28□□□□□ -1.4
DDB1-210ENST00000538129 HEXIM2Q96MH2 286 aaKnown RBP6.28□□□□□ -1.4
DDB1-210ENST00000538129 SEPT5Q99719 369 aaPredicted RBP6.28□□□□□ -1.4
DDB1-210ENST00000538129 HNRNPABQ99729 332 aaKnown RBP6.28□□□□□ -1.4
DDB1-210ENST00000538129 CRACR2AQ9BSW2 395 aa6.28□□□□□ -1.4
DDB1-210ENST00000538129 B3GNT5Q9BYG0 378 aa6.28□□□□□ -1.4
DDB1-210ENST00000538129 UBXN6Q9BZV1 441 aa6.28□□□□□ -1.4
DDB1-210ENST00000538129 BRINP2Q9C0B6 783 aa6.28□□□□□ -1.4
DDB1-210ENST00000538129 GPR88Q9GZN0 384 aa6.28□□□□□ -1.4
DDB1-210ENST00000538129 ELOVL4Q9GZR5 314 aa6.28□□□□□ -1.4
DDB1-210ENST00000538129 VPS16Q9H269 839 aa6.28□□□□□ -1.4
DDB1-210ENST00000538129 HSD3B7Q9H2F3 369 aa6.28□□□□□ -1.4
DDB1-210ENST00000538129 DPEP3Q9H4B8 488 aa6.28□□□□□ -1.4
DDB1-210ENST00000538129 POMKQ9H5K3 350 aa6.28□□□□□ -1.4
DDB1-210ENST00000538129 UBE2TQ9NPD8 197 aaPredicted RBP6.28□□□□□ -1.4
DDB1-210ENST00000538129 EHD2Q9NZN4 543 aa6.28□□□□□ -1.4
DDB1-210ENST00000538129 CEP72Q9P209 647 aa6.28□□□□□ -1.4
DDB1-210ENST00000538129 DNMT3BQ9UBC3 853 aaKnown RBP6.28□□□□□ -1.4
DDB1-210ENST00000538129 REV1Q9UBZ9 1251 aa6.28□□□□□ -1.4
DDB1-210ENST00000538129 CNTN6Q9UQ52 1028 aa6.28□□□□□ -1.4
DDB1-210ENST00000538129 NR2E1Q9Y466 385 aa6.28□□□□□ -1.4
DDB1-210ENST00000538129 YIPF1Q9Y548 306 aa6.28□□□□□ -1.4
DDB1-210ENST00000538129 GREB1Q4ZG55 1949 aa6.28□□□□□ -1.4
DDB1-210ENST00000538129 ZNF638Q14966 1978 aaKnown RBP6.27□□□□□ -1.4
DDB1-210ENST00000538129 CLUHO75153 1309 aa6.27□□□□□ -1.41
DDB1-210ENST00000538129 LOC730098B7Z3J9 87 aa6.27□□□□□ -1.41
DDB1-210ENST00000538129 PES1O00541 588 aaKnown RBP6.27□□□□□ -1.41
DDB1-210ENST00000538129 NOL4O94818 638 aa6.27□□□□□ -1.41
DDB1-210ENST00000538129 SLITRK5O94991 958 aa6.27□□□□□ -1.41
DDB1-210ENST00000538129 MED26O95402 600 aa6.27□□□□□ -1.41
DDB1-210ENST00000538129 RHOP08100 348 aa6.27□□□□□ -1.41
DDB1-210ENST00000538129 PAEPP09466 180 aa6.27□□□□□ -1.41
DDB1-210ENST00000538129 CSH1P0DML2 217 aa6.27□□□□□ -1.41
DDB1-210ENST00000538129 CSH2P0DML3 217 aa6.27□□□□□ -1.41
DDB1-210ENST00000538129 VDRP11473 427 aa6.27□□□□□ -1.41
DDB1-210ENST00000538129 ATF6P18850 670 aa6.27□□□□□ -1.41
DDB1-210ENST00000538129 BDNFP23560 247 aa6.27□□□□□ -1.41
DDB1-210ENST00000538129 ANXA13P27216 316 aa6.27□□□□□ -1.41
DDB1-210ENST00000538129 GBP1P32455 592 aa6.27□□□□□ -1.41
DDB1-210ENST00000538129 COPB1P53618 953 aaKnown RBP6.27□□□□□ -1.41
DDB1-210ENST00000538129 RAD23BP54727 409 aa6.27□□□□□ -1.41
DDB1-210ENST00000538129 MFAP3P55082 362 aa6.27□□□□□ -1.41
DDB1-210ENST00000538129 OXCT1P55809 520 aa6.27□□□□□ -1.41
DDB1-210ENST00000538129 TPM4P67936 248 aa6.27□□□□□ -1.41
DDB1-210ENST00000538129 ZP2Q05996 745 aa6.27□□□□□ -1.41
DDB1-210ENST00000538129 COL9A2Q14055 689 aaPredicted RBP6.27□□□□□ -1.41
DDB1-210ENST00000538129 TAF12Q16514 161 aa6.27□□□□□ -1.41
DDB1-210ENST00000538129 DDR2Q16832 855 aa6.27□□□□□ -1.41
DDB1-210ENST00000538129 PABPC1LQ4VXU2 614 aaKnown RBP6.27□□□□□ -1.41
DDB1-210ENST00000538129 FKBP15Q5T1M5 1219 aa6.27□□□□□ -1.41
DDB1-210ENST00000538129 ARHGAP17Q68EM7 881 aa6.27□□□□□ -1.41
DDB1-210ENST00000538129 DPY19L2P1Q6NXN4 242 aa6.27□□□□□ -1.41
DDB1-210ENST00000538129 C22orf34Q6ZV56 151 aa6.27□□□□□ -1.41
DDB1-210ENST00000538129 PAQR9Q6ZVX9 377 aa6.27□□□□□ -1.41
DDB1-210ENST00000538129 PDZD4Q76G19 769 aaPredicted RBP6.27□□□□□ -1.41
DDB1-210ENST00000538129 RRAGAQ7L523 313 aa6.27□□□□□ -1.41
DDB1-210ENST00000538129 SCN4BQ8IWT1 228 aa6.27□□□□□ -1.41
DDB1-210ENST00000538129 ZDHHC14Q8IZN3 488 aa6.27□□□□□ -1.41
DDB1-210ENST00000538129 MFSD4AQ8N468 514 aa6.27□□□□□ -1.41
DDB1-210ENST00000538129 AOPEPQ8N6M6 819 aa6.27□□□□□ -1.41
DDB1-210ENST00000538129 C12orf29Q8N999 325 aa6.27□□□□□ -1.41
DDB1-210ENST00000538129 SLC4A11Q8NBS3 891 aa6.27□□□□□ -1.41
DDB1-210ENST00000538129 SLC2A14Q8TDB8 520 aa6.27□□□□□ -1.41
DDB1-210ENST00000538129 SMARCD1Q96GM5 515 aa6.27□□□□□ -1.41
DDB1-210ENST00000538129 EAF1Q96JC9 268 aaPredicted RBP6.27□□□□□ -1.41
DDB1-210ENST00000538129 RPGRIP1Q96KN7 1286 aa6.27□□□□□ -1.41
DDB1-210ENST00000538129 KREMEN1Q96MU8 473 aa6.27□□□□□ -1.41
DDB1-210ENST00000538129 TWNKQ96RR1 684 aa6.27□□□□□ -1.41
DDB1-210ENST00000538129 CSNK1G1Q9HCP0 422 aa6.27□□□□□ -1.41
DDB1-210ENST00000538129 PLCB1Q9NQ66 1216 aa6.27□□□□□ -1.41
DDB1-210ENST00000538129 ASAH2Q9NR71 780 aa6.27□□□□□ -1.41
DDB1-210ENST00000538129 HCFC1R1Q9NWW0 138 aa6.27□□□□□ -1.41
DDB1-210ENST00000538129 COMMD8Q9NX08 183 aa6.27□□□□□ -1.41
DDB1-210ENST00000538129 TAB2Q9NYJ8 693 aa6.27□□□□□ -1.41
DDB1-210ENST00000538129 GDE1Q9NZC3 331 aa6.27□□□□□ -1.41
DDB1-210ENST00000538129 GCNT4Q9P109 453 aa6.27□□□□□ -1.41
DDB1-210ENST00000538129 SIRPGQ9P1W8 387 aa6.27□□□□□ -1.41
DDB1-210ENST00000538129 APEX2Q9UBZ4 518 aa6.27□□□□□ -1.41
DDB1-210ENST00000538129 HMGXB4Q9UGU5 601 aa6.27□□□□□ -1.41
DDB1-210ENST00000538129 KLHL3Q9UH77 587 aa6.27□□□□□ -1.41
DDB1-210ENST00000538129 ZMYM5Q9UJ78 669 aa6.27□□□□□ -1.41
DDB1-210ENST00000538129 CDH22Q9UJ99 828 aa6.27□□□□□ -1.41
DDB1-210ENST00000538129 CDH7Q9ULB5 785 aa6.27□□□□□ -1.41
DDB1-210ENST00000538129 MRPS23Q9Y3D9 190 aaKnown RBP6.27□□□□□ -1.41
DDB1-210ENST00000538129 DAAM1Q9Y4D1 1078 aa6.27□□□□□ -1.41
DDB1-210ENST00000538129 PCDHB4Q9Y5E5 795 aa6.27□□□□□ -1.41
DDB1-210ENST00000538129 PCDHB14Q9Y5E9 798 aa6.27□□□□□ -1.41
DDB1-210ENST00000538129 DENND4CQ5VZ89 1909 aa6.27□□□□□ -1.41
DDB1-210ENST00000538129 DENND4AQ7Z401 1863 aa6.26□□□□□ -1.41
DDB1-210ENST00000538129 SLC38A8A6NNN8 435 aa6.26□□□□□ -1.41
DDB1-210ENST00000538129 LGALS16A8MUM7 142 aa6.26□□□□□ -1.41
DDB1-210ENST00000538129 GOLGA6L19H0YKK7 550 aa6.26□□□□□ -1.41
DDB1-210ENST00000538129 CLDN5O00501 218 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms