RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442	SLURP1	P55000	103 aa		5.19	□□□□□ -1.58
ECHDC1-223	ENST00000534442	NOMO3	P69849	1222 aa		5.19	□□□□□ -1.58
ECHDC1-223	ENST00000534442	CREM	Q03060	361 aa		5.19	□□□□□ -1.58
ECHDC1-223	ENST00000534442	PTH1R	Q03431	593 aa		5.19	□□□□□ -1.58
ECHDC1-223	ENST00000534442	DUSP8	Q13202	625 aa		5.19	□□□□□ -1.58
ECHDC1-223	ENST00000534442	PMS2P11	Q13670	270 aa		5.19	□□□□□ -1.58
ECHDC1-223	ENST00000534442	RIN1	Q13671	783 aa		5.19	□□□□□ -1.58
ECHDC1-223	ENST00000534442	ANKRD54	Q6NXT1	300 aa		5.19	□□□□□ -1.58
ECHDC1-223	ENST00000534442	ZNF529	Q6P280	563 aa		5.19	□□□□□ -1.58
ECHDC1-223	ENST00000534442	UBE3B	Q7Z3V4	1068 aa		5.19	□□□□□ -1.58
ECHDC1-223	ENST00000534442	TICAM1	Q8IUC6	712 aa		5.19	□□□□□ -1.58
ECHDC1-223	ENST00000534442	CCDC33	Q8N5R6	958 aa		5.19	□□□□□ -1.58
ECHDC1-223	ENST00000534442	EDEM2	Q9BV94	578 aa		5.19	□□□□□ -1.58
ECHDC1-223	ENST00000534442	SIL1	Q9H173	461 aa		5.19	□□□□□ -1.58
ECHDC1-223	ENST00000534442	UPF3A	Q9H1J1	476 aa	Known RBP	5.19	□□□□□ -1.58
ECHDC1-223	ENST00000534442	TLE6	Q9H808	572 aa		5.19	□□□□□ -1.58
ECHDC1-223	ENST00000534442	PNPLA8	Q9NP80	782 aa		5.19	□□□□□ -1.58
ECHDC1-223	ENST00000534442	PRMT8	Q9NR22	394 aa	Predicted RBP	5.19	□□□□□ -1.58
ECHDC1-223	ENST00000534442	ARHGEF3	Q9NR81	526 aa		5.19	□□□□□ -1.58
ECHDC1-223	ENST00000534442	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	5.19	□□□□□ -1.58
ECHDC1-223	ENST00000534442	GJB4	Q9NTQ9	266 aa		5.19	□□□□□ -1.58
ECHDC1-223	ENST00000534442	USP40	Q9NVE5	1235 aa		5.19	□□□□□ -1.58
ECHDC1-223	ENST00000534442	GNL3L	Q9NVN8	582 aa	Known RBP	5.19	□□□□□ -1.58
ECHDC1-223	ENST00000534442	PLEKHB1	Q9UF11	243 aa	Predicted RBP	5.19	□□□□□ -1.58
ECHDC1-223	ENST00000534442	AFF4	Q9UHB7	1163 aa	Known RBP	5.19	□□□□□ -1.58
ECHDC1-223	ENST00000534442	CNPY2	Q9Y2B0	182 aa		5.19	□□□□□ -1.58
ECHDC1-223	ENST00000534442	ICE1	Q9Y2F5	2266 aa		5.19	□□□□□ -1.58
ECHDC1-223	ENST00000534442	MICAL3	Q7RTP6	2002 aa		5.19	□□□□□ -1.58
ECHDC1-223	ENST00000534442	AKAP9	Q99996	3911 aa		5.18	□□□□□ -1.58
ECHDC1-223	ENST00000534442	FLNA	P21333	2647 aa	Known RBP	5.18	□□□□□ -1.58
ECHDC1-223	ENST00000534442		A0A1W2PPC4	97 aa		5.18	□□□□□ -1.58
ECHDC1-223	ENST00000534442	CCDC189	A1A4V9	331 aa		5.18	□□□□□ -1.58
ECHDC1-223	ENST00000534442	BTN3A1	O00481	513 aa		5.18	□□□□□ -1.58
ECHDC1-223	ENST00000534442	PJA2	O43164	708 aa		5.18	□□□□□ -1.58
ECHDC1-223	ENST00000534442	NOBOX	O60393	691 aa		5.18	□□□□□ -1.58
ECHDC1-223	ENST00000534442	CABYR	O75952	493 aa		5.18	□□□□□ -1.58
ECHDC1-223	ENST00000534442	ANXA1	P04083	346 aa		5.18	□□□□□ -1.58
ECHDC1-223	ENST00000534442	PARP1	P09874	1014 aa	Known RBP	5.18	□□□□□ -1.58
ECHDC1-223	ENST00000534442	HARS	P12081	509 aa	Known RBP	5.18	□□□□□ -1.58
ECHDC1-223	ENST00000534442	BMPR1A	P36894	532 aa		5.18	□□□□□ -1.58
ECHDC1-223	ENST00000534442	BACE1	P56817	501 aa		5.18	□□□□□ -1.58
ECHDC1-223	ENST00000534442	RPS16	P62249	146 aa	Known RBP	5.18	□□□□□ -1.58
ECHDC1-223	ENST00000534442	SIM1	P81133	766 aa	Predicted RBP	5.18	□□□□□ -1.58
ECHDC1-223	ENST00000534442	AIMP1	Q12904	312 aa	Known RBP	5.18	□□□□□ -1.58
ECHDC1-223	ENST00000534442	SRSF5	Q13243	272 aa	Known RBP	5.18	□□□□□ -1.58
ECHDC1-223	ENST00000534442	TRIM14	Q14142	442 aa		5.18	□□□□□ -1.58
ECHDC1-223	ENST00000534442	GPNMB	Q14956	572 aa		5.18	□□□□□ -1.58
ECHDC1-223	ENST00000534442	TMEM95	Q3KNT9	176 aa		5.18	□□□□□ -1.58
ECHDC1-223	ENST00000534442	TCEAL6	Q6IPX3	200 aa		5.18	□□□□□ -1.58
ECHDC1-223	ENST00000534442	MICU3	Q86XE3	530 aa		5.18	□□□□□ -1.58
ECHDC1-223	ENST00000534442	XYLT1	Q86Y38	959 aa		5.18	□□□□□ -1.58
ECHDC1-223	ENST00000534442	GIMAP8	Q8ND71	665 aa	Predicted RBP	5.18	□□□□□ -1.58
ECHDC1-223	ENST00000534442	OR6B3	Q8NGW1	331 aa		5.18	□□□□□ -1.58
ECHDC1-223	ENST00000534442	TCEAL3	Q969E4	200 aa		5.18	□□□□□ -1.58
ECHDC1-223	ENST00000534442	NEIL1	Q96FI4	390 aa	Predicted RBP	5.18	□□□□□ -1.58
ECHDC1-223	ENST00000534442	NECTIN4	Q96NY8	510 aa		5.18	□□□□□ -1.58
ECHDC1-223	ENST00000534442	PPP1R16B	Q96T49	567 aa		5.18	□□□□□ -1.58
ECHDC1-223	ENST00000534442	DPYSL5	Q9BPU6	564 aa		5.18	□□□□□ -1.58
ECHDC1-223	ENST00000534442	HERPUD2	Q9BSE4	406 aa		5.18	□□□□□ -1.58
ECHDC1-223	ENST00000534442	PACSIN1	Q9BY11	444 aa		5.18	□□□□□ -1.58
ECHDC1-223	ENST00000534442	SEZ6L	Q9BYH1	1024 aa		5.18	□□□□□ -1.58
ECHDC1-223	ENST00000534442	BRD9	Q9H8M2	597 aa		5.18	□□□□□ -1.58
ECHDC1-223	ENST00000534442	FBXO34	Q9NWN3	711 aa		5.18	□□□□□ -1.58
ECHDC1-223	ENST00000534442	JKAMP	Q9P055	326 aa		5.18	□□□□□ -1.58
ECHDC1-223	ENST00000534442	ZHX1	Q9UKY1	873 aa	Predicted RBP	5.18	□□□□□ -1.58
ECHDC1-223	ENST00000534442	LRCH1	Q9Y2L9	728 aa		5.18	□□□□□ -1.58
ECHDC1-223	ENST00000534442	CACNA1E	Q15878	2313 aa		5.17	□□□□□ -1.58
ECHDC1-223	ENST00000534442		A0A087WV62	115 aa		5.17	□□□□□ -1.58
ECHDC1-223	ENST00000534442	NPIPB6	E9PJ23	425 aa		5.17	□□□□□ -1.58
ECHDC1-223	ENST00000534442		H0Y626	953 aa		5.17	□□□□□ -1.58
ECHDC1-223	ENST00000534442	APOL1	O14791	398 aa		5.17	□□□□□ -1.58
ECHDC1-223	ENST00000534442	DNAJB5	O75953	348 aa		5.17	□□□□□ -1.58
ECHDC1-223	ENST00000534442	TRIM16	O95361	564 aa		5.17	□□□□□ -1.58
ECHDC1-223	ENST00000534442	TSPAN15	O95858	294 aa		5.17	□□□□□ -1.58
ECHDC1-223	ENST00000534442	FGA	P02671	866 aa		5.17	□□□□□ -1.58
ECHDC1-223	ENST00000534442	AMH	P03971	560 aa		5.17	□□□□□ -1.58
ECHDC1-223	ENST00000534442	WEE2	P0C1S8	567 aa		5.17	□□□□□ -1.58
ECHDC1-223	ENST00000534442	LINC00271	P0C7V0	271 aa		5.17	□□□□□ -1.58
ECHDC1-223	ENST00000534442	KCNJ5	P48544	419 aa		5.17	□□□□□ -1.58
ECHDC1-223	ENST00000534442	HSPA7	P48741	367 aa		5.17	□□□□□ -1.58
ECHDC1-223	ENST00000534442	CLRN1	P58418	232 aa		5.17	□□□□□ -1.58
ECHDC1-223	ENST00000534442	TNFAIP2	Q03169	654 aa		5.17	□□□□□ -1.58
ECHDC1-223	ENST00000534442	ATP2B3	Q16720	1220 aa		5.17	□□□□□ -1.58
ECHDC1-223	ENST00000534442	BMT2	Q1RMZ1	405 aa		5.17	□□□□□ -1.58
ECHDC1-223	ENST00000534442	MPEG1	Q2M385	716 aa		5.17	□□□□□ -1.58
ECHDC1-223	ENST00000534442	ZNF568	Q3ZCX4	644 aa		5.17	□□□□□ -1.58
ECHDC1-223	ENST00000534442	ZNF648	Q5T619	568 aa	Predicted RBP	5.17	□□□□□ -1.58
ECHDC1-223	ENST00000534442	MCTP1	Q6DN14	999 aa		5.17	□□□□□ -1.58
ECHDC1-223	ENST00000534442	ZNF783	Q6ZMS7	281 aa		5.17	□□□□□ -1.58
ECHDC1-223	ENST00000534442	GPRIN1	Q7Z2K8	1008 aa		5.17	□□□□□ -1.58
ECHDC1-223	ENST00000534442	MYLK4	Q86YV6	388 aa	Predicted RBP	5.17	□□□□□ -1.58
ECHDC1-223	ENST00000534442	NKAP	Q8N5F7	415 aa	Known RBP	5.17	□□□□□ -1.58
ECHDC1-223	ENST00000534442	ANKRD42	Q8N9B4	389 aa		5.17	□□□□□ -1.58
ECHDC1-223	ENST00000534442	ATP11C	Q8NB49	1132 aa		5.17	□□□□□ -1.58
ECHDC1-223	ENST00000534442	MYRIP	Q8NFW9	859 aa		5.17	□□□□□ -1.58
ECHDC1-223	ENST00000534442	TCF25	Q9BQ70	676 aa		5.17	□□□□□ -1.58
ECHDC1-223	ENST00000534442	MOV10L1	Q9BXT6	1211 aa	Known RBP	5.17	□□□□□ -1.58
ECHDC1-223	ENST00000534442	RLIM	Q9NVW2	624 aa		5.17	□□□□□ -1.58
ECHDC1-223	ENST00000534442	FAM30A	Q9NZY2	134 aa		5.17	□□□□□ -1.58
ECHDC1-223	ENST00000534442	CFAP97	Q9P2B7	532 aa		5.17	□□□□□ -1.58

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