RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 USE1Q9NZ43 259 aa7.18□□□□□ -1.26
CTNND1-236ENST00000533667 SH3GLB1Q9Y371 365 aa7.18□□□□□ -1.26
CTNND1-236ENST00000533667 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.18□□□□□ -1.26
CTNND1-236ENST00000533667 DDX3XO00571 662 aaKnown RBP eCLIP7.18□□□□□ -1.262e-13■□□□□ 9.3
CTNND1-236ENST00000533667 TRIM24O15164 1050 aa7.18□□□□□ -1.26
CTNND1-236ENST00000533667 DLGAP3O95886 979 aa7.18□□□□□ -1.26
CTNND1-236ENST00000533667 HMGCRP04035 888 aa7.18□□□□□ -1.26
CTNND1-236ENST00000533667 RHOCP08134 193 aa7.18□□□□□ -1.26
CTNND1-236ENST00000533667 SERPINF2P08697 491 aa7.18□□□□□ -1.26
CTNND1-236ENST00000533667 CAPZA2P47755 286 aa7.18□□□□□ -1.26
CTNND1-236ENST00000533667 PIK3CGP48736 1102 aa7.18□□□□□ -1.26
CTNND1-236ENST00000533667 CCT8P50990 548 aa7.18□□□□□ -1.26
CTNND1-236ENST00000533667 ZNF157P51786 506 aaPredicted RBP7.18□□□□□ -1.26
CTNND1-236ENST00000533667 FCGRTP55899 365 aa7.18□□□□□ -1.26
CTNND1-236ENST00000533667 UBE3AQ05086 875 aa7.18□□□□□ -1.26
CTNND1-236ENST00000533667 R3HDM1Q15032 1099 aaKnown RBP7.18□□□□□ -1.26
CTNND1-236ENST00000533667 PGM5Q15124 567 aa7.18□□□□□ -1.26
CTNND1-236ENST00000533667 TBCELQ5QJ74 424 aa7.18□□□□□ -1.26
CTNND1-236ENST00000533667 MARC1Q5VT66 337 aa7.18□□□□□ -1.26
CTNND1-236ENST00000533667 ZNF544Q6NX49 715 aa7.18□□□□□ -1.26
CTNND1-236ENST00000533667 PLEKHH3Q7Z736 793 aa7.18□□□□□ -1.26
CTNND1-236ENST00000533667 FAM131BQ86XD5 332 aa7.18□□□□□ -1.26
CTNND1-236ENST00000533667 CREG2Q8IUH2 290 aa7.18□□□□□ -1.26
CTNND1-236ENST00000533667 MAP4K3Q8IVH8 894 aa7.18□□□□□ -1.26
CTNND1-236ENST00000533667 GLMNQ92990 594 aa7.18□□□□□ -1.26
CTNND1-236ENST00000533667 TMEM169Q96HH4 297 aa7.18□□□□□ -1.26
CTNND1-236ENST00000533667 UGT2B28Q9BY64 529 aa7.18□□□□□ -1.26
CTNND1-236ENST00000533667 ELOVL6Q9H5J4 265 aa7.18□□□□□ -1.26
CTNND1-236ENST00000533667 WDR41Q9HAD4 459 aa7.18□□□□□ -1.26
CTNND1-236ENST00000533667 RGS18Q9NS28 235 aa7.18□□□□□ -1.26
CTNND1-236ENST00000533667 GPATCH2LQ9NWQ4 482 aa7.18□□□□□ -1.26
CTNND1-236ENST00000533667 AHSPQ9NZD4 102 aa7.18□□□□□ -1.26
CTNND1-236ENST00000533667 BTBD7Q9P203 1132 aa7.18□□□□□ -1.26
CTNND1-236ENST00000533667 PDZK1P1A8MUH7 402 aa7.17□□□□□ -1.26
CTNND1-236ENST00000533667 MAP2K7O14733 419 aa7.17□□□□□ -1.26
CTNND1-236ENST00000533667 PEX14O75381 377 aa7.17□□□□□ -1.26
CTNND1-236ENST00000533667 ALDH1A2O94788 518 aa7.17□□□□□ -1.26
CTNND1-236ENST00000533667 ABHD2P08910 425 aa7.17□□□□□ -1.26
CTNND1-236ENST00000533667 MYBL2P10244 700 aa7.17□□□□□ -1.26
CTNND1-236ENST00000533667 RARAP10276 462 aa7.17□□□□□ -1.26
CTNND1-236ENST00000533667 KLRK1P26718 216 aa7.17□□□□□ -1.26
CTNND1-236ENST00000533667 LRPAP1P30533 357 aa7.17□□□□□ -1.26
CTNND1-236ENST00000533667 GRK3P35626 688 aa7.17□□□□□ -1.26
CTNND1-236ENST00000533667 GLRBP48167 497 aa7.17□□□□□ -1.26
CTNND1-236ENST00000533667 TKTL1P51854 596 aa7.17□□□□□ -1.26
CTNND1-236ENST00000533667 CACNA2D1P54289 1103 aa7.17□□□□□ -1.26
CTNND1-236ENST00000533667 FKBP1AP62942 108 aaKnown RBP7.17□□□□□ -1.26
CTNND1-236ENST00000533667 EPS8Q12929 822 aa7.17□□□□□ -1.26
CTNND1-236ENST00000533667 PREPLQ4J6C6 727 aaPredicted RBP7.17□□□□□ -1.26
CTNND1-236ENST00000533667 SLC45A4Q5BKX6 768 aa7.17□□□□□ -1.26
CTNND1-236ENST00000533667 SAMD4BQ5PRF9 694 aaKnown RBP7.17□□□□□ -1.26
CTNND1-236ENST00000533667 TMC5Q6UXY8 1006 aa7.17□□□□□ -1.26
CTNND1-236ENST00000533667 OTOP1Q7RTM1 612 aa7.17□□□□□ -1.26
CTNND1-236ENST00000533667 DHFR2Q86XF0 187 aa7.17□□□□□ -1.26
CTNND1-236ENST00000533667 CYP4Z2PQ8N1L4 340 aa7.17□□□□□ -1.26
CTNND1-236ENST00000533667 NSMCE2Q96MF7 247 aa7.17□□□□□ -1.26
CTNND1-236ENST00000533667 SLC25A23Q9BV35 468 aa7.17□□□□□ -1.26
CTNND1-236ENST00000533667 MRPS26Q9BYN8 205 aaKnown RBP7.17□□□□□ -1.26
CTNND1-236ENST00000533667 EURLQ9NYK6 297 aa7.17□□□□□ -1.26
CTNND1-236ENST00000533667 CYP39A1Q9NYL5 469 aa7.17□□□□□ -1.26
CTNND1-236ENST00000533667 KANSL3Q9P2N6 904 aa7.17□□□□□ -1.26
CTNND1-236ENST00000533667 LNPEPQ9UIQ6 1025 aa7.17□□□□□ -1.26
CTNND1-236ENST00000533667 DOLKQ9UPQ8 538 aa7.17□□□□□ -1.26
CTNND1-236ENST00000533667 UBE2Q2LH0YL09 131 aa7.17□□□□□ -1.26
CTNND1-236ENST00000533667 SLITRK3O94933 977 aa7.17□□□□□ -1.26
CTNND1-236ENST00000533667 ZCCHC18P0CG32 403 aa7.17□□□□□ -1.26
CTNND1-236ENST00000533667 MYL4P12829 197 aa7.17□□□□□ -1.26
CTNND1-236ENST00000533667 ATP6V1B2P21281 511 aa7.17□□□□□ -1.26
CTNND1-236ENST00000533667 ME2P23368 584 aa7.17□□□□□ -1.26
CTNND1-236ENST00000533667 EN1Q05925 392 aaPredicted RBP7.17□□□□□ -1.26
CTNND1-236ENST00000533667 SEZ6Q53EL9 994 aa7.17□□□□□ -1.26
CTNND1-236ENST00000533667 SNX30Q5VWJ9 437 aa7.17□□□□□ -1.26
CTNND1-236ENST00000533667 PPP4R4Q6NUP7 873 aa7.17□□□□□ -1.26
CTNND1-236ENST00000533667 ZNF467Q7Z7K2 595 aaPredicted RBP7.17□□□□□ -1.26
CTNND1-236ENST00000533667 ZNF410Q86VK4 478 aa7.17□□□□□ -1.26
CTNND1-236ENST00000533667 PACS2Q86VP3 889 aa7.17□□□□□ -1.26
CTNND1-236ENST00000533667 KCNMB4Q86W47 210 aa7.17□□□□□ -1.26
CTNND1-236ENST00000533667 STK32AQ8WU08 396 aa7.17□□□□□ -1.26
CTNND1-236ENST00000533667 BTN2A2Q8WVV5 523 aa7.17□□□□□ -1.26
CTNND1-236ENST00000533667 POP5Q969H6 163 aaKnown RBP7.17□□□□□ -1.26
CTNND1-236ENST00000533667 RMND5BQ96G75 393 aaPredicted RBP7.17□□□□□ -1.26
CTNND1-236ENST00000533667 FAM163AQ96GL9 167 aaPredicted RBP7.17□□□□□ -1.26
CTNND1-236ENST00000533667 PRMT6Q96LA8 375 aaPredicted RBP7.17□□□□□ -1.26
CTNND1-236ENST00000533667 POP1Q99575 1024 aaKnown RBP7.17□□□□□ -1.26
CTNND1-236ENST00000533667 TMEM79Q9BSE2 394 aa7.17□□□□□ -1.26
CTNND1-236ENST00000533667 C9orf16Q9BUW7 83 aa7.17□□□□□ -1.26
CTNND1-236ENST00000533667 FHDC1Q9C0D6 1143 aaPredicted RBP7.17□□□□□ -1.26
CTNND1-236ENST00000533667 COPS7BQ9H9Q2 264 aaPredicted RBP7.17□□□□□ -1.26
CTNND1-236ENST00000533667 KLK14Q9P0G3 267 aa7.17□□□□□ -1.26
CTNND1-236ENST00000533667 ATXN10Q9UBB4 475 aa7.17□□□□□ -1.26
CTNND1-236ENST00000533667 POLLQ9UGP5 575 aa7.17□□□□□ -1.26
CTNND1-236ENST00000533667 TMCO1Q9UM00 188 aa7.17□□□□□ -1.26
CTNND1-236ENST00000533667 RPL26L1Q9UNX3 145 aaKnown RBP7.17□□□□□ -1.26
CTNND1-236ENST00000533667 PRG3Q9Y2Y8 225 aaPredicted RBP7.17□□□□□ -1.26
CTNND1-236ENST00000533667 CEP170BQ9Y4F5 1589 aaPredicted RBP7.17□□□□□ -1.26
CTNND1-236ENST00000533667 A0A087X1B8 175 aa7.17□□□□□ -1.26
CTNND1-236ENST00000533667 ACKR2O00590 384 aa7.17□□□□□ -1.26
CTNND1-236ENST00000533667 RAD51BO15315 384 aa7.17□□□□□ -1.26
CTNND1-236ENST00000533667 CHADO15335 359 aa7.17□□□□□ -1.26
CTNND1-236ENST00000533667 MSH3P20585 1137 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms