RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 TCAIMQ8N3R3 496 aa6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 FNIP1Q8TF40 1166 aa6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 C10orf82Q8WW14 230 aa6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 KRT35Q92764 455 aa6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 ART4Q93070 314 aa6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 UTP4Q969X6 686 aaKnown RBP6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 AGAP3Q96P47 875 aa6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 TARS2Q9BW92 718 aaKnown RBP6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 COPS7BQ9H9Q2 264 aaPredicted RBP6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 SRRDQ9UH36 339 aa6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 GNPTGQ9UJJ9 305 aa6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 MYO5AQ9Y4I1 1855 aaKnown RBP6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 ANKRD36CQ5JPF3 1778 aa6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 PSMD12O00232 456 aaPredicted RBP6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 ATP5BP06576 529 aaKnown RBP6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 FAM163BP0C2L3 166 aa6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 P4HA1P13674 534 aa6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 PRKACBP22694 351 aa6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 SSTR3P32745 418 aaPredicted RBP6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 NUDT2P50583 147 aa6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 RPL26P61254 145 aaKnown RBP6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 CACNB2Q08289 660 aaPredicted RBP6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 ZNF846Q147U1 533 aa6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 NPY5RQ15761 445 aa6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 NEDD8Q15843 81 aa6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 OTOP1Q7RTM1 612 aa6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 FRMD5Q7Z6J6 570 aa6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 TRABD2AQ86V40 505 aa6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 GTF3C2Q8WUA4 911 aaPredicted RBP6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 RAD54LQ92698 747 aa6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 C12orf42Q96LP6 360 aa6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 CEP295NLQ96MC4 621 aa6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 SENP7Q9BQF6 1050 aa6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 ADPGKQ9BRR6 497 aa6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 FAM213AQ9BRX8 229 aa6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 TRIM15Q9C019 465 aa6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 ADNPQ9H2P0 1102 aa6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 KRT82Q9NSB4 513 aa6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 PNPLA3Q9NST1 481 aa6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 PGAP2Q9UHJ9 254 aa6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 PPM1HQ9ULR3 514 aa6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 PSMD13Q9UNM6 376 aa6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 A0A087WZ62 844 aa6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 LGALS2P05162 132 aa6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 FYNP06241 537 aa6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 ASGR1P07306 291 aa6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 KRT7P08729 469 aa6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 GM2AP17900 193 aa6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 TCN1P20061 433 aaPredicted RBP6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 CCNA2P20248 432 aa6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 PTGS2P35354 604 aa6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 CDK9P50750 372 aaKnown RBP6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 MAPK10P53779 464 aa6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 MRPS22P82650 360 aaKnown RBP6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 PTK7Q13308 1070 aa6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 GRB10Q13322 594 aa6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 KCNA10Q16322 511 aa6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 ECM1Q16610 540 aa6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 XKR3Q5GH77 459 aa6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 BNC2Q6ZN30 1099 aaPredicted RBP6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 C3orf62Q6ZUJ4 267 aa6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 PDSS2Q86YH6 399 aa6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 CDKL2Q92772 493 aa6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 CPB2Q96IY4 423 aa6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 FDXACB1Q9BRP7 624 aaPredicted RBP6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 KCNMB3Q9NPA1 279 aa6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 FLRT1Q9NZU1 646 aa6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 TMEM59LQ9UK28 342 aa6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 LRFN2Q9ULH4 789 aa6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 HES2Q9Y543 173 aa6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 SNX13Q9Y5W8 968 aa6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 CCRL2O00421 344 aa6.96□□□□□ -1.29
TGFBR3-209ENST00000532540 UGT1A9O60656 530 aa6.96□□□□□ -1.29
TGFBR3-209ENST00000532540 GABBR2O75899 941 aa6.96□□□□□ -1.29
TGFBR3-209ENST00000532540 FARP2O94887 1054 aaPredicted RBP6.96□□□□□ -1.29
TGFBR3-209ENST00000532540 SLITRK3O94933 977 aa6.96□□□□□ -1.29
TGFBR3-209ENST00000532540 KRT1P04264 644 aa6.96□□□□□ -1.29
TGFBR3-209ENST00000532540 SUPT20HL2P0C7V6 817 aa6.96□□□□□ -1.29
TGFBR3-209ENST00000532540 CD19P15391 556 aa6.96□□□□□ -1.29
TGFBR3-209ENST00000532540 UGT1A6P19224 532 aa6.96□□□□□ -1.29
TGFBR3-209ENST00000532540 IL10P22301 178 aa6.96□□□□□ -1.29
TGFBR3-209ENST00000532540 UGT1A1P22309 533 aa6.96□□□□□ -1.29
TGFBR3-209ENST00000532540 UGT1A4P22310 534 aa6.96□□□□□ -1.29
TGFBR3-209ENST00000532540 UGT1A3P35503 534 aa6.96□□□□□ -1.29
TGFBR3-209ENST00000532540 UGT1A5P35504 534 aa6.96□□□□□ -1.29
TGFBR3-209ENST00000532540 OAZ1P54368 228 aa6.96□□□□□ -1.29
TGFBR3-209ENST00000532540 KCNA1Q09470 495 aa6.96□□□□□ -1.29
TGFBR3-209ENST00000532540 BFSP2Q13515 415 aa6.96□□□□□ -1.29
TGFBR3-209ENST00000532540 EMC2Q15006 297 aa6.96□□□□□ -1.29
TGFBR3-209ENST00000532540 GEN1Q17RS7 908 aa6.96□□□□□ -1.29
TGFBR3-209ENST00000532540 CEP78Q5JTW2 689 aa6.96□□□□□ -1.29
TGFBR3-209ENST00000532540 FOXB2Q5VYV0 432 aa6.96□□□□□ -1.29
TGFBR3-209ENST00000532540 PRELID2Q8N945 189 aa6.96□□□□□ -1.29
TGFBR3-209ENST00000532540 TTC13Q8NBP0 860 aa6.96□□□□□ -1.29
TGFBR3-209ENST00000532540 DNERQ8NFT8 737 aa6.96□□□□□ -1.29
TGFBR3-209ENST00000532540 ZFP28Q8NHY6 868 aa6.96□□□□□ -1.29
TGFBR3-209ENST00000532540 NCSTNQ92542 709 aa6.96□□□□□ -1.29
TGFBR3-209ENST00000532540 GPRASP2Q96D09 838 aa6.96□□□□□ -1.29
TGFBR3-209ENST00000532540 RMDN1Q96DB5 314 aa6.96□□□□□ -1.29
TGFBR3-209ENST00000532540 HES6Q96HZ4 224 aa6.96□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms