RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 NUDT22Q9BRQ3 303 aa4.94□□□□□ -1.62
USP47-211ENST00000531513 KLC4Q9NSK0 619 aa4.94□□□□□ -1.62
USP47-211ENST00000531513 DNAJB11Q9UBS4 358 aa4.94□□□□□ -1.62
USP47-211ENST00000531513 ARHGAP26Q9UNA1 814 aa4.94□□□□□ -1.62
USP47-211ENST00000531513 RRP7AQ9Y3A4 280 aaKnown RBP4.94□□□□□ -1.62
USP47-211ENST00000531513 A0A1W2PPH5 198 aa4.93□□□□□ -1.62
USP47-211ENST00000531513 ZSCAN9O15535 394 aaPredicted RBP4.93□□□□□ -1.62
USP47-211ENST00000531513 KCNAB3O43448 404 aa4.93□□□□□ -1.62
USP47-211ENST00000531513 SRGAP2O75044 1071 aa4.93□□□□□ -1.62
USP47-211ENST00000531513 TAF5LO75529 589 aa4.93□□□□□ -1.62
USP47-211ENST00000531513 TTLL1O95922 423 aa4.93□□□□□ -1.62
USP47-211ENST00000531513 IGKV2-30P06310 120 aa4.93□□□□□ -1.62
USP47-211ENST00000531513 KELP23276 732 aa4.93□□□□□ -1.62
USP47-211ENST00000531513 EPHB2P29323 1055 aa4.93□□□□□ -1.62
USP47-211ENST00000531513 CLNS1AP54105 237 aaKnown RBP4.93□□□□□ -1.62
USP47-211ENST00000531513 PRKAG1P54619 331 aa4.93□□□□□ -1.62
USP47-211ENST00000531513 NAP1L1P55209 391 aaKnown RBP4.93□□□□□ -1.62
USP47-211ENST00000531513 NUCB1Q02818 461 aa4.93□□□□□ -1.62
USP47-211ENST00000531513 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.93□□□□□ -1.62
USP47-211ENST00000531513 RPS6KA2Q15349 733 aa4.93□□□□□ -1.62
USP47-211ENST00000531513 SMAD1Q15797 465 aaKnown RBP4.93□□□□□ -1.62
USP47-211ENST00000531513 ACAD10Q6JQN1 1059 aa4.93□□□□□ -1.62
USP47-211ENST00000531513 SPARTQ8N0X7 666 aa4.93□□□□□ -1.62
USP47-211ENST00000531513 USP38Q8NB14 1042 aa4.93□□□□□ -1.62
USP47-211ENST00000531513 DNAJB14Q8TBM8 379 aa4.93□□□□□ -1.62
USP47-211ENST00000531513 CPT1BQ92523 772 aa4.93□□□□□ -1.62
USP47-211ENST00000531513 ZUFSPQ96AP4 578 aa4.93□□□□□ -1.62
USP47-211ENST00000531513 ZNF48Q96MX3 618 aaPredicted RBP4.93□□□□□ -1.62
USP47-211ENST00000531513 FCRL4Q96PJ5 515 aa4.93□□□□□ -1.62
USP47-211ENST00000531513 OSBPL9Q96SU4 736 aa4.93□□□□□ -1.62
USP47-211ENST00000531513 PTDSS2Q9BVG9 487 aa4.93□□□□□ -1.62
USP47-211ENST00000531513 FSCN3Q9NQT6 498 aa4.93□□□□□ -1.62
USP47-211ENST00000531513 NDUFAF4Q9P032 175 aa4.93□□□□□ -1.62
USP47-211ENST00000531513 VPS51Q9UID3 782 aa4.93□□□□□ -1.62
USP47-211ENST00000531513 CNTN6Q9UQ52 1028 aa4.93□□□□□ -1.62
USP47-211ENST00000531513 MRPS17Q9Y2R5 130 aaKnown RBP4.93□□□□□ -1.62
USP47-211ENST00000531513 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.93□□□□□ -1.62
USP47-211ENST00000531513 TSPAN3O60637 253 aa4.92□□□□□ -1.62
USP47-211ENST00000531513 USO1O60763 962 aaKnown RBP4.92□□□□□ -1.62
USP47-211ENST00000531513 ZBED4O75132 1171 aa4.92□□□□□ -1.62
USP47-211ENST00000531513 LATS1O95835 1130 aa4.92□□□□□ -1.62
USP47-211ENST00000531513 BMP15O95972 392 aa4.92□□□□□ -1.62
USP47-211ENST00000531513 TFRCP02786 760 aaKnown RBP4.92□□□□□ -1.62
USP47-211ENST00000531513 HNRNPA1P09651 372 aaKnown RBP eCLIP4.92□□□□□ -1.62
USP47-211ENST00000531513 EBLN1P0CF75 366 aa4.92□□□□□ -1.62
USP47-211ENST00000531513 NR2F6P10588 404 aa4.92□□□□□ -1.62
USP47-211ENST00000531513 RPS6KB1P23443 525 aa4.92□□□□□ -1.62
USP47-211ENST00000531513 MCM2P49736 904 aa4.92□□□□□ -1.62
USP47-211ENST00000531513 TUBA4AP68366 448 aa4.92□□□□□ -1.62
USP47-211ENST00000531513 FHL3Q13643 280 aa4.92□□□□□ -1.62
USP47-211ENST00000531513 KRT32Q14532 448 aa4.92□□□□□ -1.62
USP47-211ENST00000531513 ATG16L1Q676U5 607 aa4.92□□□□□ -1.62
USP47-211ENST00000531513 TMEM108Q6UXF1 575 aa4.92□□□□□ -1.62
USP47-211ENST00000531513 ZNF66Q6ZN08 573 aa4.92□□□□□ -1.62
USP47-211ENST00000531513 SYT13Q7L8C5 426 aa4.92□□□□□ -1.62
USP47-211ENST00000531513 FAM9BQ8IZU0 186 aa4.92□□□□□ -1.62
USP47-211ENST00000531513 ANKRD52Q8NB46 1076 aa4.92□□□□□ -1.62
USP47-211ENST00000531513 TDRD7Q8NHU6 1098 aaKnown RBP4.92□□□□□ -1.62
USP47-211ENST00000531513 MBD3L2Q8NHZ7 208 aaPredicted RBP4.92□□□□□ -1.62
USP47-211ENST00000531513 RPL36ALQ969Q0 106 aaKnown RBP4.92□□□□□ -1.62
USP47-211ENST00000531513 RSRC1Q96IZ7 334 aaKnown RBP4.92□□□□□ -1.62
USP47-211ENST00000531513 HIST1H2AAQ96QV6 131 aa4.92□□□□□ -1.62
USP47-211ENST00000531513 ZCWPW1Q9H0M4 648 aa4.92□□□□□ -1.62
USP47-211ENST00000531513 SMOC2Q9H3U7 446 aa4.92□□□□□ -1.62
USP47-211ENST00000531513 ABHD16BQ9H3Z7 469 aa4.92□□□□□ -1.62
USP47-211ENST00000531513 CXorf36Q9H7Y0 433 aa4.92□□□□□ -1.62
USP47-211ENST00000531513 GBA2Q9HCG7 927 aaPredicted RBP4.92□□□□□ -1.62
USP47-211ENST00000531513 KCND3Q9UK17 655 aa4.92□□□□□ -1.62
USP47-211ENST00000531513 TBX20Q9UMR3 447 aa4.92□□□□□ -1.62
USP47-211ENST00000531513 USP22Q9UPT9 525 aa4.92□□□□□ -1.62
USP47-211ENST00000531513 DNAJC16Q9Y2G8 782 aa4.92□□□□□ -1.62
USP47-211ENST00000531513 TTLL3Q9Y4R7 772 aa4.92□□□□□ -1.62
USP47-211ENST00000531513 PGPEP1LA6NFU8 196 aa4.91□□□□□ -1.62
USP47-211ENST00000531513 RPP40O75818 363 aaKnown RBP4.91□□□□□ -1.62
USP47-211ENST00000531513 RTN3O95197 1032 aaPredicted RBP4.91□□□□□ -1.62
USP47-211ENST00000531513 HNRNPCP07910 306 aaKnown RBP eCLIP4.91□□□□□ -1.62
USP47-211ENST00000531513 HGFP14210 728 aa4.91□□□□□ -1.62
USP47-211ENST00000531513 HOXB6P17509 224 aaKnown RBP4.91□□□□□ -1.62
USP47-211ENST00000531513 SERPINA4P29622 427 aa4.91□□□□□ -1.62
USP47-211ENST00000531513 PRKAR1BP31321 381 aa4.91□□□□□ -1.62
USP47-211ENST00000531513 NDUFV1P49821 464 aa4.91□□□□□ -1.62
USP47-211ENST00000531513 CCT8P50990 548 aa4.91□□□□□ -1.62
USP47-211ENST00000531513 RBM5P52756 815 aaKnown RBP eCLIP4.91□□□□□ -1.62
USP47-211ENST00000531513 TUBB3Q13509 450 aa4.91□□□□□ -1.62
USP47-211ENST00000531513 CCNIQ14094 377 aa4.91□□□□□ -1.62
USP47-211ENST00000531513 E2F2Q14209 437 aa4.91□□□□□ -1.62
USP47-211ENST00000531513 CTXN3Q4LDR2 81 aa4.91□□□□□ -1.62
USP47-211ENST00000531513 HAUS3Q68CZ6 603 aa4.91□□□□□ -1.62
USP47-211ENST00000531513 NEK8Q86SG6 692 aa4.91□□□□□ -1.62
USP47-211ENST00000531513 OR8H2Q8N162 312 aa4.91□□□□□ -1.62
USP47-211ENST00000531513 FAM109AQ8N4B1 249 aa4.91□□□□□ -1.62
USP47-211ENST00000531513 ADAMTS15Q8TE58 950 aa4.91□□□□□ -1.62
USP47-211ENST00000531513 RFKQ969G6 155 aa4.91□□□□□ -1.62
USP47-211ENST00000531513 SEMA4CQ9C0C4 833 aa4.91□□□□□ -1.62
USP47-211ENST00000531513 ORC3Q9UBD5 711 aaPredicted RBP4.91□□□□□ -1.62
USP47-211ENST00000531513 NDRG4Q9ULP0 352 aaKnown RBP4.91□□□□□ -1.62
USP47-211ENST00000531513 NFU1Q9UMS0 254 aa4.91□□□□□ -1.62
USP47-211ENST00000531513 BTBD3Q9Y2F9 522 aa4.91□□□□□ -1.62
USP47-211ENST00000531513 CYP46A1Q9Y6A2 500 aa4.91□□□□□ -1.62
USP47-211ENST00000531513 FSD2A1L4K1 749 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms