RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.82■□□□□ 0.28
PTPRU-210ENST00000527027 MAPK8IP1Q9UQF2 711 aa16.82■□□□□ 0.28
PTPRU-210ENST00000527027 BTBD3Q9Y2F9 522 aa16.82■□□□□ 0.28
PTPRU-210ENST00000527027 ANKRD6Q9Y2G4 727 aa16.82■□□□□ 0.28
PTPRU-210ENST00000527027 HBS1LQ9Y450 684 aaKnown RBP16.82■□□□□ 0.28
PTPRU-210ENST00000527027 SNX11Q9Y5W9 270 aa16.82■□□□□ 0.28
PTPRU-210ENST00000527027 CABIN1Q9Y6J0 2220 aa16.82■□□□□ 0.28
PTPRU-210ENST00000527027 TRABD2BA6NFA1 517 aa16.81■□□□□ 0.28
PTPRU-210ENST00000527027 GOLGA8CPA6NN73 597 aa16.81■□□□□ 0.28
PTPRU-210ENST00000527027 TNFSF14O43557 240 aa16.81■□□□□ 0.28
PTPRU-210ENST00000527027 GRIA4P48058 902 aa16.81■□□□□ 0.28
PTPRU-210ENST00000527027 BHLHA9Q7RTU4 235 aa16.81■□□□□ 0.28
PTPRU-210ENST00000527027 KIAA0907Q7Z7F0 614 aaPredicted RBP16.81■□□□□ 0.28
PTPRU-210ENST00000527027 ADIPOR2Q86V24 386 aa16.81■□□□□ 0.28
PTPRU-210ENST00000527027 GUF1Q8N442 669 aaKnown RBP16.81■□□□□ 0.28
PTPRU-210ENST00000527027 FBXL13Q8NEE6 735 aa16.81■□□□□ 0.28
PTPRU-210ENST00000527027 RNF139Q8WU17 664 aa16.81■□□□□ 0.28
PTPRU-210ENST00000527027 NDRG1Q92597 394 aaKnown RBP16.81■□□□□ 0.28
PTPRU-210ENST00000527027 IGSF8Q969P0 613 aa16.81■□□□□ 0.28
PTPRU-210ENST00000527027 SNX21Q969T3 373 aa16.81■□□□□ 0.28
PTPRU-210ENST00000527027 BIRC7Q96CA5 298 aa16.81■□□□□ 0.28
PTPRU-210ENST00000527027 FBRSQ9HAH7 460 aa16.81■□□□□ 0.28
PTPRU-210ENST00000527027 LRRC4Q9HBW1 653 aa16.81■□□□□ 0.28
PTPRU-210ENST00000527027 SCUBE2Q9NQ36 999 aa16.81■□□□□ 0.28
PTPRU-210ENST00000527027 PRSS16Q9NQE7 514 aa16.81■□□□□ 0.28
PTPRU-210ENST00000527027 ABCB8Q9NUT2 735 aa16.81■□□□□ 0.28
PTPRU-210ENST00000527027 RAB20Q9NX57 234 aa16.81■□□□□ 0.28
PTPRU-210ENST00000527027 STOML2Q9UJZ1 356 aa16.81■□□□□ 0.28
PTPRU-210ENST00000527027 HPSEQ9Y251 543 aa16.81■□□□□ 0.28
PTPRU-210ENST00000527027 URB1O60287 2271 aaKnown RBP16.8■□□□□ 0.28
PTPRU-210ENST00000527027 TULP2O00295 520 aa16.8■□□□□ 0.28
PTPRU-210ENST00000527027 SEMA4FO95754 770 aa16.8■□□□□ 0.28
PTPRU-210ENST00000527027 LATS1O95835 1130 aa16.8■□□□□ 0.28
PTPRU-210ENST00000527027 CD27P26842 260 aa16.8■□□□□ 0.28
PTPRU-210ENST00000527027 GRK6P43250 576 aa16.8■□□□□ 0.28
PTPRU-210ENST00000527027 RPS14P62263 151 aaKnown RBP16.8■□□□□ 0.28
PTPRU-210ENST00000527027 ADGRF1Q5T601 910 aa16.8■□□□□ 0.28
PTPRU-210ENST00000527027 ZNF366Q8N895 744 aa16.8■□□□□ 0.28
PTPRU-210ENST00000527027 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.8■□□□□ 0.28
PTPRU-210ENST00000527027 TATDN2Q93075 761 aa16.8■□□□□ 0.28
PTPRU-210ENST00000527027 GGA2Q9UJY4 613 aa16.8■□□□□ 0.28
PTPRU-210ENST00000527027 GCN1Q92616 2671 aaKnown RBP16.8■□□□□ 0.28
PTPRU-210ENST00000527027 CKAP5Q14008 2032 aa16.79■□□□□ 0.28
PTPRU-210ENST00000527027 SMG1Q96Q15 3661 aaKnown RBP16.79■□□□□ 0.28
PTPRU-210ENST00000527027 KCNK3O14649 394 aa16.79■□□□□ 0.28
PTPRU-210ENST00000527027 XPO1O14980 1071 aaKnown RBP16.79■□□□□ 0.28
PTPRU-210ENST00000527027 PCDHGA12O60330 932 aa16.79■□□□□ 0.28
PTPRU-210ENST00000527027 STX10O60499 249 aa16.79■□□□□ 0.28
PTPRU-210ENST00000527027 FSBPO95073 299 aa16.79■□□□□ 0.28
PTPRU-210ENST00000527027 DNTTP04053 509 aa16.79■□□□□ 0.28
PTPRU-210ENST00000527027 ATP5BP06576 529 aaKnown RBP16.79■□□□□ 0.28
PTPRU-210ENST00000527027 DLDP09622 509 aaKnown RBP16.79■□□□□ 0.28
PTPRU-210ENST00000527027 PABPC1P11940 636 aaKnown RBP16.79■□□□□ 0.28
PTPRU-210ENST00000527027 MXI1P50539 228 aa16.79■□□□□ 0.28
PTPRU-210ENST00000527027 CCT8P50990 548 aa16.79■□□□□ 0.28
PTPRU-210ENST00000527027 BCAT1P54687 386 aa16.79■□□□□ 0.28
PTPRU-210ENST00000527027 CYP4F3Q08477 520 aa16.79■□□□□ 0.28
PTPRU-210ENST00000527027 CAMK2BQ13554 666 aa16.79■□□□□ 0.28
PTPRU-210ENST00000527027 PTPRNQ16849 979 aa16.79■□□□□ 0.28
PTPRU-210ENST00000527027 GOLGA7BQ2TAP0 167 aa16.79■□□□□ 0.28
PTPRU-210ENST00000527027 BSPRYQ5W0U4 402 aa16.79■□□□□ 0.28
PTPRU-210ENST00000527027 MBLAC2Q68D91 279 aa16.79■□□□□ 0.28
PTPRU-210ENST00000527027 MARCH9Q86YJ5 346 aa16.79■□□□□ 0.28
PTPRU-210ENST00000527027 AHI1Q8N157 1196 aa16.79■□□□□ 0.28
PTPRU-210ENST00000527027 ENGASEQ8NFI3 743 aa16.79■□□□□ 0.28
PTPRU-210ENST00000527027 EDEM1Q92611 657 aa16.79■□□□□ 0.28
PTPRU-210ENST00000527027 GOLGA1Q92805 767 aa16.79■□□□□ 0.28
PTPRU-210ENST00000527027 IPO9Q96P70 1041 aaKnown RBP16.79■□□□□ 0.28
PTPRU-210ENST00000527027 SGK2Q9HBY8 427 aa16.79■□□□□ 0.28
PTPRU-210ENST00000527027 ABCC13Q9NSE7 274 aa16.79■□□□□ 0.28
PTPRU-210ENST00000527027 SUN2Q9UH99 717 aa16.79■□□□□ 0.28
PTPRU-210ENST00000527027 SFMBT1Q9UHJ3 866 aa16.79■□□□□ 0.28
PTPRU-210ENST00000527027 GOLGA4Q13439 2230 aaKnown RBP16.78■□□□□ 0.28
PTPRU-210ENST00000527027 H0Y8X5 98 aa16.78■□□□□ 0.28
PTPRU-210ENST00000527027 DFNA5O60443 496 aa16.78■□□□□ 0.28
PTPRU-210ENST00000527027 HSP90AA1P07900 732 aaKnown RBP16.78■□□□□ 0.28
PTPRU-210ENST00000527027 PRR29P0C7W0 189 aa16.78■□□□□ 0.28
PTPRU-210ENST00000527027 CTSKP43235 329 aa16.78■□□□□ 0.28
PTPRU-210ENST00000527027 DPYDQ12882 1025 aa16.78■□□□□ 0.28
PTPRU-210ENST00000527027 PKP1Q13835 747 aa16.78■□□□□ 0.28
PTPRU-210ENST00000527027 SMAD1Q15797 465 aaKnown RBP16.78■□□□□ 0.28
PTPRU-210ENST00000527027 TTC31Q49AM3 519 aaPredicted RBP16.78■□□□□ 0.28
PTPRU-210ENST00000527027 ZCWPW2Q504Y3 356 aa16.78■□□□□ 0.28
PTPRU-210ENST00000527027 KCNT1Q5JUK3 1230 aa16.78■□□□□ 0.28
PTPRU-210ENST00000527027 PDCD7Q8N8D1 485 aaKnown RBP16.78■□□□□ 0.28
PTPRU-210ENST00000527027 LRIG1Q96JA1 1093 aa16.78■□□□□ 0.28
PTPRU-210ENST00000527027 HESX1Q9UBX0 185 aa16.78■□□□□ 0.28
PTPRU-210ENST00000527027 TSPAN16Q9UKR8 245 aa16.78■□□□□ 0.28
PTPRU-210ENST00000527027 NUMA1Q14980 2115 aa16.78■□□□□ 0.28
PTPRU-210ENST00000527027 ASXL3Q9C0F0 2248 aa16.77■□□□□ 0.28
PTPRU-210ENST00000527027 YJEFN3A6XGL0 299 aa16.77■□□□□ 0.28
PTPRU-210ENST00000527027 E7ENQ6 273 aa16.77■□□□□ 0.28
PTPRU-210ENST00000527027 POLR2EP19388 210 aaKnown RBP16.77■□□□□ 0.28
PTPRU-210ENST00000527027 SYKP43405 635 aa16.77■□□□□ 0.28
PTPRU-210ENST00000527027 ADIGQ0VDE8 80 aa16.77■□□□□ 0.28
PTPRU-210ENST00000527027 BST2Q10589 180 aaKnown RBP16.77■□□□□ 0.28
PTPRU-210ENST00000527027 EDRF1Q3B7T1 1238 aa16.77■□□□□ 0.28
PTPRU-210ENST00000527027 SGO2Q562F6 1265 aa16.77■□□□□ 0.28
PTPRU-210ENST00000527027 MPP7Q5T2T1 576 aa16.77■□□□□ 0.28
PTPRU-210ENST00000527027 ZNF776Q68DI1 518 aaPredicted RBP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms