RNA–Protein interactions for RNA: ENST00000522702.5

FAM49B-222, Transcript of family with sequence similarity 49 member B, human

TSL 4

Gene FAM49B, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM49B-222	ENST00000522702	DIS3L2	Q8IYB7	885 aa	Known RBP	4.37	□□□□□ -1.71
FAM49B-222	ENST00000522702	NSUN7	Q8NE18	718 aa	Known RBP	4.37	□□□□□ -1.71
FAM49B-222	ENST00000522702	WDR60	Q8WVS4	1066 aa		4.37	□□□□□ -1.71
FAM49B-222	ENST00000522702	HMGB4	Q8WW32	186 aa		4.37	□□□□□ -1.71
FAM49B-222	ENST00000522702	ATP2A3	Q93084	1043 aa		4.37	□□□□□ -1.71
FAM49B-222	ENST00000522702	NSUN4	Q96CB9	384 aa	Known RBP	4.37	□□□□□ -1.71
FAM49B-222	ENST00000522702	CNDP2	Q96KP4	475 aa	Known RBP	4.37	□□□□□ -1.71
FAM49B-222	ENST00000522702	SPATA17	Q96L03	361 aa		4.37	□□□□□ -1.71
FAM49B-222	ENST00000522702	MED15	Q96RN5	788 aa		4.37	□□□□□ -1.71
FAM49B-222	ENST00000522702	TRIB1	Q96RU8	372 aa		4.37	□□□□□ -1.71
FAM49B-222	ENST00000522702	SMO	Q99835	787 aa		4.37	□□□□□ -1.71
FAM49B-222	ENST00000522702	ZSWIM1	Q9BR11	485 aa		4.37	□□□□□ -1.71
FAM49B-222	ENST00000522702	REXO4	Q9GZR2	422 aa	Known RBP	4.37	□□□□□ -1.71
FAM49B-222	ENST00000522702	SIL1	Q9H173	461 aa		4.37	□□□□□ -1.71
FAM49B-222	ENST00000522702	XPNPEP3	Q9NQH7	507 aa		4.37	□□□□□ -1.71
FAM49B-222	ENST00000522702	CAPN11	Q9UMQ6	739 aa		4.37	□□□□□ -1.71
FAM49B-222	ENST00000522702	HPSE	Q9Y251	543 aa		4.37	□□□□□ -1.71
FAM49B-222	ENST00000522702	TMEM5	Q9Y2B1	443 aa		4.37	□□□□□ -1.71
FAM49B-222	ENST00000522702	ATP11B	Q9Y2G3	1177 aa		4.37	□□□□□ -1.71
FAM49B-222	ENST00000522702	MAP3K2	Q9Y2U5	619 aa		4.37	□□□□□ -1.71
FAM49B-222	ENST00000522702	SNX8	Q9Y5X2	465 aa		4.37	□□□□□ -1.71
FAM49B-222	ENST00000522702	AATK	Q6ZMQ8	1374 aa		4.37	□□□□□ -1.71
FAM49B-222	ENST00000522702	WIZ	O95785	1651 aa		4.36	□□□□□ -1.71
FAM49B-222	ENST00000522702	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		4.36	□□□□□ -1.71
FAM49B-222	ENST00000522702	CCDC195	A0A1B0GUA6	201 aa		4.36	□□□□□ -1.71
FAM49B-222	ENST00000522702	SMTNL1	A8MU46	457 aa		4.36	□□□□□ -1.71
FAM49B-222	ENST00000522702	EFCAB8	A8MWE9	144 aa		4.36	□□□□□ -1.71
FAM49B-222	ENST00000522702		E7ENX8	843 aa		4.36	□□□□□ -1.71
FAM49B-222	ENST00000522702	PROB1	E7EW31	1015 aa		4.36	□□□□□ -1.71
FAM49B-222	ENST00000522702	PEX12	O00623	359 aa		4.36	□□□□□ -1.71
FAM49B-222	ENST00000522702	RGS10	O43665	173 aa		4.36	□□□□□ -1.71
FAM49B-222	ENST00000522702	SRGAP2	O75044	1071 aa		4.36	□□□□□ -1.71
FAM49B-222	ENST00000522702	VPS4B	O75351	444 aa		4.36	□□□□□ -1.71
FAM49B-222	ENST00000522702	RPP40	O75818	363 aa	Known RBP	4.36	□□□□□ -1.71
FAM49B-222	ENST00000522702	SUN1	O94901	812 aa		4.36	□□□□□ -1.71
FAM49B-222	ENST00000522702	ZFPL1	O95159	310 aa		4.36	□□□□□ -1.71
FAM49B-222	ENST00000522702	SPDEF	O95238	335 aa		4.36	□□□□□ -1.71
FAM49B-222	ENST00000522702	NTSR2	O95665	410 aa		4.36	□□□□□ -1.71
FAM49B-222	ENST00000522702	HSPA4L	O95757	839 aa		4.36	□□□□□ -1.71
FAM49B-222	ENST00000522702	MLYCD	O95822	493 aa		4.36	□□□□□ -1.71
FAM49B-222	ENST00000522702	CYP2C9	P11712	490 aa		4.36	□□□□□ -1.71
FAM49B-222	ENST00000522702	MAPK4	P31152	587 aa		4.36	□□□□□ -1.71
FAM49B-222	ENST00000522702	ZNF134	P52741	427 aa		4.36	□□□□□ -1.71
FAM49B-222	ENST00000522702	HSD11B2	P80365	405 aa		4.36	□□□□□ -1.71
FAM49B-222	ENST00000522702	SATB1	Q01826	763 aa		4.36	□□□□□ -1.71
FAM49B-222	ENST00000522702	CREB5	Q02930	508 aa		4.36	□□□□□ -1.71
FAM49B-222	ENST00000522702	TAP2	Q03519	686 aa		4.36	□□□□□ -1.71
FAM49B-222	ENST00000522702	RNASEL	Q05823	741 aa	Known RBP	4.36	□□□□□ -1.71
FAM49B-222	ENST00000522702	ZNF844	Q08AG5	666 aa		4.36	□□□□□ -1.71
FAM49B-222	ENST00000522702	MAMLD1	Q13495	774 aa		4.36	□□□□□ -1.71
FAM49B-222	ENST00000522702	SEC23B	Q15437	767 aa		4.36	□□□□□ -1.71
FAM49B-222	ENST00000522702	NFIL3	Q16649	462 aa		4.36	□□□□□ -1.71
FAM49B-222	ENST00000522702	P3H1	Q32P28	736 aa		4.36	□□□□□ -1.71
FAM49B-222	ENST00000522702	ZIK1	Q3SY52	487 aa	Predicted RBP	4.36	□□□□□ -1.71
FAM49B-222	ENST00000522702	SPDYE7P	Q495Y7	208 aa		4.36	□□□□□ -1.71
FAM49B-222	ENST00000522702	GALNTL6	Q49A17	601 aa		4.36	□□□□□ -1.71
FAM49B-222	ENST00000522702	B3GNTL1	Q67FW5	361 aa	Predicted RBP	4.36	□□□□□ -1.71
FAM49B-222	ENST00000522702	TAF2	Q6P1X5	1199 aa		4.36	□□□□□ -1.71
FAM49B-222	ENST00000522702	KLHL24	Q6TFL4	600 aa		4.36	□□□□□ -1.71
FAM49B-222	ENST00000522702	FAM47E	Q6ZV65	393 aa		4.36	□□□□□ -1.71
FAM49B-222	ENST00000522702	H1FNT	Q75WM6	255 aa	Predicted RBP	4.36	□□□□□ -1.71
FAM49B-222	ENST00000522702	LRRC8D	Q7L1W4	858 aa		4.36	□□□□□ -1.71
FAM49B-222	ENST00000522702	PXK	Q7Z7A4	578 aa		4.36	□□□□□ -1.71
FAM49B-222	ENST00000522702	SLC44A3	Q8N4M1	653 aa		4.36	□□□□□ -1.71
FAM49B-222	ENST00000522702	SRBD1	Q8N5C6	995 aa	Known RBP	4.36	□□□□□ -1.71
FAM49B-222	ENST00000522702	USP38	Q8NB14	1042 aa		4.36	□□□□□ -1.71
FAM49B-222	ENST00000522702	PSD4	Q8NDX1	1056 aa		4.36	□□□□□ -1.71
FAM49B-222	ENST00000522702	CREB3L4	Q8TEY5	395 aa		4.36	□□□□□ -1.71
FAM49B-222	ENST00000522702	ASB10	Q8WXI3	467 aa		4.36	□□□□□ -1.71
FAM49B-222	ENST00000522702	SMG7	Q92540	1137 aa	Known RBP	4.36	□□□□□ -1.71
FAM49B-222	ENST00000522702	VMP1	Q96GC9	406 aa		4.36	□□□□□ -1.71
FAM49B-222	ENST00000522702	RBM17	Q96I25	401 aa	Known RBP	4.36	□□□□□ -1.71
FAM49B-222	ENST00000522702	APOPT1	Q96IL0	206 aa		4.36	□□□□□ -1.71
FAM49B-222	ENST00000522702	SLC46A1	Q96NT5	459 aa		4.36	□□□□□ -1.71
FAM49B-222	ENST00000522702	MOGAT1	Q96PD6	335 aa		4.36	□□□□□ -1.71
FAM49B-222	ENST00000522702	ITPA	Q9BY32	194 aa		4.36	□□□□□ -1.71
FAM49B-222	ENST00000522702	SLC29A3	Q9BZD2	475 aa		4.36	□□□□□ -1.71
FAM49B-222	ENST00000522702	FTO	Q9C0B1	505 aa	Known RBP eCLIP	4.36	□□□□□ -1.71
FAM49B-222	ENST00000522702	SMOC2	Q9H3U7	446 aa		4.36	□□□□□ -1.71
FAM49B-222	ENST00000522702	ZWILCH	Q9H900	591 aa		4.36	□□□□□ -1.71
FAM49B-222	ENST00000522702	DIAPH3	Q9NSV4	1193 aa		4.36	□□□□□ -1.71
FAM49B-222	ENST00000522702	SEPT11	Q9NVA2	429 aa	Known RBP	4.36	□□□□□ -1.71
FAM49B-222	ENST00000522702	CHORDC1	Q9UHD1	332 aa	Predicted RBP	4.36	□□□□□ -1.71
FAM49B-222	ENST00000522702	ZNF215	Q9UL58	517 aa	Predicted RBP	4.36	□□□□□ -1.71
FAM49B-222	ENST00000522702	TOP2A	P11388	1531 aa	Known RBP	4.36	□□□□□ -1.71
FAM49B-222	ENST00000522702		A0A1W2PS29	197 aa		4.35	□□□□□ -1.71
FAM49B-222	ENST00000522702	FAM90A18P	A6NE21	464 aa		4.35	□□□□□ -1.71
FAM49B-222	ENST00000522702	FAM90A16P	A6NEW6	464 aa		4.35	□□□□□ -1.71
FAM49B-222	ENST00000522702	FAM90A9P	A6NNJ1	464 aa		4.35	□□□□□ -1.71
FAM49B-222	ENST00000522702	FAM90A5P	A8MXJ8	464 aa		4.35	□□□□□ -1.71
FAM49B-222	ENST00000522702	KIF28P	B7ZC32	967 aa		4.35	□□□□□ -1.71
FAM49B-222	ENST00000522702		H7C0S8	307 aa		4.35	□□□□□ -1.71
FAM49B-222	ENST00000522702	ZSCAN9	O15535	394 aa	Predicted RBP	4.35	□□□□□ -1.71
FAM49B-222	ENST00000522702	GJB3	O75712	270 aa		4.35	□□□□□ -1.71
FAM49B-222	ENST00000522702	TSPAN9	O75954	239 aa		4.35	□□□□□ -1.71
FAM49B-222	ENST00000522702	CFI	P05156	583 aa		4.35	□□□□□ -1.71
FAM49B-222	ENST00000522702	ATXN1L	P0C7T5	689 aa	Known RBP	4.35	□□□□□ -1.71
FAM49B-222	ENST00000522702	FAM90A15P	P0C7V4	464 aa		4.35	□□□□□ -1.71
FAM49B-222	ENST00000522702	FAM90A14P	P0C7W9	464 aa		4.35	□□□□□ -1.71
FAM49B-222	ENST00000522702	TGFB3	P10600	412 aa		4.35	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms