RNA–Protein interactions for RNA: ENST00000522414.1

PVT1-213, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 654 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-213ENST00000522414 PNKPQ96T60 521 aa8.48□□□□□ -1.05
PVT1-213ENST00000522414 SMOQ99835 787 aa8.48□□□□□ -1.05
PVT1-213ENST00000522414 VRTNQ9H8Y1 702 aa8.48□□□□□ -1.05
PVT1-213ENST00000522414 EXOC1Q9NV70 894 aa8.48□□□□□ -1.05
PVT1-213ENST00000522414 IL37Q9NZH6 218 aa8.48□□□□□ -1.05
PVT1-213ENST00000522414 GMIPQ9P107 970 aa8.48□□□□□ -1.05
PVT1-213ENST00000522414 HMGXB4Q9UGU5 601 aa8.48□□□□□ -1.05
PVT1-213ENST00000522414 MYO16Q9Y6X6 1858 aa8.48□□□□□ -1.05
PVT1-213ENST00000522414 CFAP47Q6ZTR5 3102 aa8.48□□□□□ -1.05
PVT1-213ENST00000522414 USP24Q9UPU5 2620 aa8.48□□□□□ -1.05
PVT1-213ENST00000522414 MYO18AQ92614 2054 aaKnown RBP8.47□□□□□ -1.05
PVT1-213ENST00000522414 SGK1O00141 431 aa8.47□□□□□ -1.05
PVT1-213ENST00000522414 PDXKO00764 312 aa8.47□□□□□ -1.05
PVT1-213ENST00000522414 SLC9A3R1O14745 358 aaPredicted RBP8.47□□□□□ -1.05
PVT1-213ENST00000522414 AKAP3O75969 853 aa8.47□□□□□ -1.05
PVT1-213ENST00000522414 KRT37O76014 449 aa8.47□□□□□ -1.05
PVT1-213ENST00000522414 RTN3O95197 1032 aaPredicted RBP8.47□□□□□ -1.05
PVT1-213ENST00000522414 KAT7O95251 611 aa8.47□□□□□ -1.05
PVT1-213ENST00000522414 KLF8O95600 359 aaPredicted RBP8.47□□□□□ -1.05
PVT1-213ENST00000522414 CAVIN2O95810 425 aa8.47□□□□□ -1.05
PVT1-213ENST00000522414 RPN1P04843 607 aaKnown RBP8.47□□□□□ -1.05
PVT1-213ENST00000522414 ADRB1P08588 477 aa8.47□□□□□ -1.05
PVT1-213ENST00000522414 IRF1P10914 325 aa8.47□□□□□ -1.05
PVT1-213ENST00000522414 BCKDHBP21953 392 aa8.47□□□□□ -1.05
PVT1-213ENST00000522414 MPLP40238 635 aa8.47□□□□□ -1.05
PVT1-213ENST00000522414 NDUFA8P51970 172 aa8.47□□□□□ -1.05
PVT1-213ENST00000522414 AP3M2P53677 418 aa8.47□□□□□ -1.05
PVT1-213ENST00000522414 SLC5A3P53794 718 aa8.47□□□□□ -1.05
PVT1-213ENST00000522414 CRY1Q16526 586 aa8.47□□□□□ -1.05
PVT1-213ENST00000522414 ZACNQ401N2 412 aa8.47□□□□□ -1.05
PVT1-213ENST00000522414 USP39Q53GS9 565 aaKnown RBP8.47□□□□□ -1.05
PVT1-213ENST00000522414 COX20Q5RI15 118 aa8.47□□□□□ -1.05
PVT1-213ENST00000522414 N4BP2L1Q5TBK1 243 aaPredicted RBP8.47□□□□□ -1.05
PVT1-213ENST00000522414 IL31Q6EBC2 164 aa8.47□□□□□ -1.05
PVT1-213ENST00000522414 BBS7Q8IWZ6 715 aa8.47□□□□□ -1.05
PVT1-213ENST00000522414 CRYBG2Q8N1P7 616 aa8.47□□□□□ -1.05
PVT1-213ENST00000522414 IL17RCQ8NAC3 791 aa8.47□□□□□ -1.05
PVT1-213ENST00000522414 TXNDC5Q8NBS9 432 aaKnown RBP8.47□□□□□ -1.05
PVT1-213ENST00000522414 UBASH3BQ8TF42 649 aa8.47□□□□□ -1.05
PVT1-213ENST00000522414 JAKMIP2Q96AA8 810 aa8.47□□□□□ -1.05
PVT1-213ENST00000522414 ERLEC1Q96DZ1 483 aa8.47□□□□□ -1.05
PVT1-213ENST00000522414 EEF2KMTQ96G04 330 aa8.47□□□□□ -1.05
PVT1-213ENST00000522414 TNIP3Q96KP6 325 aa8.47□□□□□ -1.05
PVT1-213ENST00000522414 TWNKQ96RR1 684 aa8.47□□□□□ -1.05
PVT1-213ENST00000522414 ARHGEF4Q9NR80 690 aa8.47□□□□□ -1.05
PVT1-213ENST00000522414 KRT82Q9NSB4 513 aa8.47□□□□□ -1.05
PVT1-213ENST00000522414 FAM49BQ9NUQ9 324 aa8.47□□□□□ -1.05
PVT1-213ENST00000522414 OSER1Q9NX31 292 aa8.47□□□□□ -1.05
PVT1-213ENST00000522414 NUDT5Q9UKK9 219 aa8.47□□□□□ -1.05
PVT1-213ENST00000522414 CHD6Q8TD26 2715 aa8.46□□□□□ -1.05
PVT1-213ENST00000522414 EML5Q05BV3 1969 aa8.46□□□□□ -1.05
PVT1-213ENST00000522414 WDFY3Q8IZQ1 3526 aa8.46□□□□□ -1.06
PVT1-213ENST00000522414 E2F8A0AVK6 867 aa8.46□□□□□ -1.06
PVT1-213ENST00000522414 BCLAF3A2AJT9 711 aaKnown RBP8.46□□□□□ -1.06
PVT1-213ENST00000522414 TBC1D3BA6NDS4 549 aa8.46□□□□□ -1.06
PVT1-213ENST00000522414 C4orf47A7E2U8 309 aa8.46□□□□□ -1.06
PVT1-213ENST00000522414 PATE3B3GLJ2 98 aa8.46□□□□□ -1.06
PVT1-213ENST00000522414 RHOBTB1O94844 696 aa8.46□□□□□ -1.06
PVT1-213ENST00000522414 ASS1P00966 412 aaKnown RBP8.46□□□□□ -1.06
PVT1-213ENST00000522414 HLA-DRAP01903 254 aa8.46□□□□□ -1.06
PVT1-213ENST00000522414 ZDHHC11BP0C7U3 371 aa8.46□□□□□ -1.06
PVT1-213ENST00000522414 TRIM49P0CI25 452 aa8.46□□□□□ -1.06
PVT1-213ENST00000522414 TRIM49CP0CI26 452 aa8.46□□□□□ -1.06
PVT1-213ENST00000522414 ADH5P11766 374 aa8.46□□□□□ -1.06
PVT1-213ENST00000522414 ADORA2BP29275 332 aa8.46□□□□□ -1.06
PVT1-213ENST00000522414 GRIA2P42262 883 aa8.46□□□□□ -1.06
PVT1-213ENST00000522414 WASP42768 502 aa8.46□□□□□ -1.06
PVT1-213ENST00000522414 KIR2DL1P43626 348 aaPredicted RBP8.46□□□□□ -1.06
PVT1-213ENST00000522414 ASPAP45381 313 aa8.46□□□□□ -1.06
PVT1-213ENST00000522414 GCLMP48507 274 aa8.46□□□□□ -1.06
PVT1-213ENST00000522414 IRX4P78413 519 aa8.46□□□□□ -1.06
PVT1-213ENST00000522414 MRPS21P82921 87 aaKnown RBP8.46□□□□□ -1.06
PVT1-213ENST00000522414 KDSRQ06136 332 aa8.46□□□□□ -1.06
PVT1-213ENST00000522414 PPP3CAQ08209 521 aa8.46□□□□□ -1.06
PVT1-213ENST00000522414 ELF2Q15723 593 aa8.46□□□□□ -1.06
PVT1-213ENST00000522414 ANO4Q32M45 955 aa8.46□□□□□ -1.06
PVT1-213ENST00000522414 SNX30Q5VWJ9 437 aa8.46□□□□□ -1.06
PVT1-213ENST00000522414 OGFOD2Q6N063 350 aa8.46□□□□□ -1.06
PVT1-213ENST00000522414 GPRIN1Q7Z2K8 1008 aa8.46□□□□□ -1.06
PVT1-213ENST00000522414 RASSF3Q86WH2 238 aa8.46□□□□□ -1.06
PVT1-213ENST00000522414 DEFB119Q8N690 84 aa8.46□□□□□ -1.06
PVT1-213ENST00000522414 KIAA1958Q8N8K9 716 aa8.46□□□□□ -1.06
PVT1-213ENST00000522414 MDGA1Q8NFP4 955 aa8.46□□□□□ -1.06
PVT1-213ENST00000522414 TAS1R2Q8TE23 839 aa8.46□□□□□ -1.06
PVT1-213ENST00000522414 GLMNQ92990 594 aa8.46□□□□□ -1.06
PVT1-213ENST00000522414 CYFIP2Q96F07 1278 aa8.46□□□□□ -1.06
PVT1-213ENST00000522414 SMARCD1Q96GM5 515 aa8.46□□□□□ -1.06
PVT1-213ENST00000522414 SPATA32Q96LK8 384 aa8.46□□□□□ -1.06
PVT1-213ENST00000522414 NACA2Q9H009 215 aa8.46□□□□□ -1.06
PVT1-213ENST00000522414 MMRN2Q9H8L6 949 aa8.46□□□□□ -1.06
PVT1-213ENST00000522414 APOBEC3GQ9HC16 384 aaKnown RBP8.46□□□□□ -1.06
PVT1-213ENST00000522414 DMAP1Q9NPF5 467 aaPredicted RBP8.46□□□□□ -1.06
PVT1-213ENST00000522414 VPS45Q9NRW7 570 aa8.46□□□□□ -1.06
PVT1-213ENST00000522414 TBC1D14Q9P2M4 693 aa8.46□□□□□ -1.06
PVT1-213ENST00000522414 MMP17Q9ULZ9 603 aa8.46□□□□□ -1.06
PVT1-213ENST00000522414 HPSEQ9Y251 543 aa8.46□□□□□ -1.06
PVT1-213ENST00000522414 SH3BP1Q9Y3L3 701 aa8.46□□□□□ -1.06
PVT1-213ENST00000522414 PCDHGA5Q9Y5G8 931 aa8.46□□□□□ -1.06
PVT1-213ENST00000522414 SPEGQ15772 3267 aa8.46□□□□□ -1.06
PVT1-213ENST00000522414 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms