RNA–Protein interactions for RNA: ENST00000519583.5

CLK4-203, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,462 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-203ENST00000519583 DENND2CQ68D51 928 aa8.27□□□□□ -1.09
CLK4-203ENST00000519583 SUSD6Q92537 303 aa8.27□□□□□ -1.09
CLK4-203ENST00000519583 ZNF707Q96C28 371 aaPredicted RBP8.27□□□□□ -1.09
CLK4-203ENST00000519583 ATP6V1G3Q96LB4 118 aa8.27□□□□□ -1.09
CLK4-203ENST00000519583 CYLDQ9NQC7 956 aa8.27□□□□□ -1.09
CLK4-203ENST00000519583 PCDHB5Q9Y5E4 795 aa8.27□□□□□ -1.09
CLK4-203ENST00000519583 IFNB1P01574 187 aa8.26□□□□□ -1.09
CLK4-203ENST00000519583 RARGP13631 454 aa8.26□□□□□ -1.09
CLK4-203ENST00000519583 SP100P23497 879 aaPredicted RBP8.26□□□□□ -1.09
CLK4-203ENST00000519583 HOXA9P31269 272 aa8.26□□□□□ -1.09
CLK4-203ENST00000519583 MAP3K7CLP57077 242 aa8.26□□□□□ -1.09
CLK4-203ENST00000519583 SMARCB1Q12824 385 aa8.26□□□□□ -1.09
CLK4-203ENST00000519583 DPYSL3Q14195 570 aa8.26□□□□□ -1.09
CLK4-203ENST00000519583 CA9Q16790 459 aa8.26□□□□□ -1.09
CLK4-203ENST00000519583 KRT71Q3SY84 523 aa8.26□□□□□ -1.09
CLK4-203ENST00000519583 CLEC20AQ6ZU45 233 aa8.26□□□□□ -1.09
CLK4-203ENST00000519583 SPATA2LQ8IUW3 424 aaPredicted RBP8.26□□□□□ -1.09
CLK4-203ENST00000519583 SPPL2BQ8TCT7 592 aa8.26□□□□□ -1.09
CLK4-203ENST00000519583 FAM149B1Q96BN6 582 aa8.26□□□□□ -1.09
CLK4-203ENST00000519583 NECTIN4Q96NY8 510 aa8.26□□□□□ -1.09
CLK4-203ENST00000519583 SNRNP25Q9BV90 132 aaKnown RBP8.26□□□□□ -1.09
CLK4-203ENST00000519583 POMKQ9H5K3 350 aa8.26□□□□□ -1.09
CLK4-203ENST00000519583 MAFFQ9ULX9 164 aa8.26□□□□□ -1.09
CLK4-203ENST00000519583 DRG1Q9Y295 367 aaKnown RBP8.26□□□□□ -1.09
CLK4-203ENST00000519583 ENDOD1O94919 500 aa8.26□□□□□ -1.09
CLK4-203ENST00000519583 ITGAVP06756 1048 aa8.26□□□□□ -1.09
CLK4-203ENST00000519583 FAM200BP0CF97 657 aa8.26□□□□□ -1.09
CLK4-203ENST00000519583 DESP17661 470 aa8.26□□□□□ -1.09
CLK4-203ENST00000519583 SCNN1AP37088 669 aa8.26□□□□□ -1.09
CLK4-203ENST00000519583 PTPN9P43378 593 aa8.26□□□□□ -1.09
CLK4-203ENST00000519583 ALDH1A3P47895 512 aa8.26□□□□□ -1.09
CLK4-203ENST00000519583 DMTNQ08495 405 aa8.26□□□□□ -1.09
CLK4-203ENST00000519583 GPS1Q13098 491 aa8.26□□□□□ -1.09
CLK4-203ENST00000519583 SLC29A2Q14542 456 aa8.26□□□□□ -1.09
CLK4-203ENST00000519583 BOLA3Q53S33 107 aa8.26□□□□□ -1.09
CLK4-203ENST00000519583 NPNTQ6UXI9 565 aa8.26□□□□□ -1.09
CLK4-203ENST00000519583 RTL10Q7L3V2 364 aa8.26□□□□□ -1.09
CLK4-203ENST00000519583 GRASPQ7Z6J2 395 aaPredicted RBP8.26□□□□□ -1.09
CLK4-203ENST00000519583 FAM35AQ86V20 835 aa8.26□□□□□ -1.09
CLK4-203ENST00000519583 TTC13Q8NBP0 860 aa8.26□□□□□ -1.09
CLK4-203ENST00000519583 C2orf15Q8WU43 125 aaKnown RBP8.26□□□□□ -1.09
CLK4-203ENST00000519583 MYLPFQ96A32 169 aa8.26□□□□□ -1.09
CLK4-203ENST00000519583 PCED1BQ96HM7 432 aa8.26□□□□□ -1.09
CLK4-203ENST00000519583 MAK16Q9BXY0 300 aaKnown RBP8.26□□□□□ -1.09
CLK4-203ENST00000519583 LRRC4Q9HBW1 653 aa8.26□□□□□ -1.09
CLK4-203ENST00000519583 PSD3Q9NYI0 1048 aa8.26□□□□□ -1.09
CLK4-203ENST00000519583 BCCIPQ9P287 314 aaKnown RBP eCLIP8.26□□□□□ -1.09
CLK4-203ENST00000519583 RIPK2O43353 540 aa8.26□□□□□ -1.09
CLK4-203ENST00000519583 NUDT17P0C025 328 aa8.26□□□□□ -1.09
CLK4-203ENST00000519583 TUFMP49411 452 aaKnown RBP8.26□□□□□ -1.09
CLK4-203ENST00000519583 GDF10P55107 478 aa8.26□□□□□ -1.09
CLK4-203ENST00000519583 NTHL1P78549 312 aa8.26□□□□□ -1.09
CLK4-203ENST00000519583 CAV1Q03135 178 aa8.26□□□□□ -1.09
CLK4-203ENST00000519583 MAPRE1Q15691 268 aaKnown RBP8.26□□□□□ -1.09
CLK4-203ENST00000519583 SKIDA1Q1XH10 827 aa8.26□□□□□ -1.09
CLK4-203ENST00000519583 C4orf50Q6ZRC1 276 aa8.26□□□□□ -1.09
CLK4-203ENST00000519583 ELMOD1Q8N336 334 aa8.26□□□□□ -1.09
CLK4-203ENST00000519583 BBOF1Q8ND07 529 aa8.26□□□□□ -1.09
CLK4-203ENST00000519583 TEKT4Q8WW24 435 aa8.26□□□□□ -1.09
CLK4-203ENST00000519583 TBCBQ99426 244 aa8.26□□□□□ -1.09
CLK4-203ENST00000519583 PKMYT1Q99640 499 aa8.26□□□□□ -1.09
CLK4-203ENST00000519583 DDX23Q9BUQ8 820 aaKnown RBP8.26□□□□□ -1.09
CLK4-203ENST00000519583 CDC42EP4Q9H3Q1 356 aaKnown RBP8.26□□□□□ -1.09
CLK4-203ENST00000519583 PCDH18Q9HCL0 1135 aa8.26□□□□□ -1.09
CLK4-203ENST00000519583 HCFC1R1Q9NWW0 138 aa8.26□□□□□ -1.09
CLK4-203ENST00000519583 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.26□□□□□ -1.09
CLK4-203ENST00000519583 HMGB1P1B2RPK0 211 aaPredicted RBP8.25□□□□□ -1.09
CLK4-203ENST00000519583 APOC4-APOC2K7ER74 178 aa8.25□□□□□ -1.09
CLK4-203ENST00000519583 AP1G2O75843 785 aa8.25□□□□□ -1.09
CLK4-203ENST00000519583 APOC2P02655 101 aa8.25□□□□□ -1.09
CLK4-203ENST00000519583 CYP2F1P24903 491 aa8.25□□□□□ -1.09
CLK4-203ENST00000519583 CACNA2D1P54289 1103 aa8.25□□□□□ -1.09
CLK4-203ENST00000519583 EPHB3P54753 998 aa8.25□□□□□ -1.09
CLK4-203ENST00000519583 EIF3EP60228 445 aaKnown RBP8.25□□□□□ -1.09
CLK4-203ENST00000519583 EFHC1Q5JVL4 640 aa8.25□□□□□ -1.09
CLK4-203ENST00000519583 FAM171BQ6P995 826 aa8.25□□□□□ -1.09
CLK4-203ENST00000519583 B4GALNT4Q76KP1 1039 aa8.25□□□□□ -1.09
CLK4-203ENST00000519583 SCN4BQ8IWT1 228 aa8.25□□□□□ -1.09
CLK4-203ENST00000519583 DEFB106AQ8N104 65 aa8.25□□□□□ -1.09
CLK4-203ENST00000519583 SIX6OS1Q8N1H7 587 aa8.25□□□□□ -1.09
CLK4-203ENST00000519583 MYCBPAPQ8TBZ2 947 aa8.25□□□□□ -1.09
CLK4-203ENST00000519583 CCHCR1Q8TD31 782 aa8.25□□□□□ -1.09
CLK4-203ENST00000519583 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.25□□□□□ -1.09
CLK4-203ENST00000519583 ADAMTS19Q8TE59 1207 aa8.25□□□□□ -1.09
CLK4-203ENST00000519583 ZNF512Q96ME7 567 aaPredicted RBP8.25□□□□□ -1.09
CLK4-203ENST00000519583 NECAB3Q96P71 396 aaPredicted RBP8.25□□□□□ -1.09
CLK4-203ENST00000519583 CORO1BQ9BR76 489 aa8.25□□□□□ -1.09
CLK4-203ENST00000519583 PHF7Q9BWX1 381 aaPredicted RBP8.25□□□□□ -1.09
CLK4-203ENST00000519583 RHOBTB2Q9BYZ6 727 aa8.25□□□□□ -1.09
CLK4-203ENST00000519583 PCDH9Q9HC56 1237 aa8.25□□□□□ -1.09
CLK4-203ENST00000519583 TMEM30AQ9NV96 361 aa8.25□□□□□ -1.09
CLK4-203ENST00000519583 SMIM23A6NLE4 172 aa8.25□□□□□ -1.09
CLK4-203ENST00000519583 DNALI1O14645 258 aaPredicted RBP8.25□□□□□ -1.09
CLK4-203ENST00000519583 ACSL3O95573 720 aa8.25□□□□□ -1.09
CLK4-203ENST00000519583 HAPLN1P10915 354 aaPredicted RBP8.25□□□□□ -1.09
CLK4-203ENST00000519583 IL4RP24394 825 aa8.25□□□□□ -1.09
CLK4-203ENST00000519583 ATP1A2P50993 1020 aa8.25□□□□□ -1.09
CLK4-203ENST00000519583 TKTL1P51854 596 aa8.25□□□□□ -1.09
CLK4-203ENST00000519583 EIF3BP55884 814 aaKnown RBP8.25□□□□□ -1.09
CLK4-203ENST00000519583 PLD1Q13393 1074 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms