RNA–Protein interactions for RNA: ENST00000518371.2

MRPS28-203, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-203ENST00000518371 KRT31Q15323 416 aa6.41□□□□□ -1.38
MRPS28-203ENST00000518371 MLF2Q15773 248 aaPredicted RBP6.41□□□□□ -1.38
MRPS28-203ENST00000518371 MIIPQ5JXC2 388 aa6.41□□□□□ -1.38
MRPS28-203ENST00000518371 CDKAL1Q5VV42 579 aa6.41□□□□□ -1.38
MRPS28-203ENST00000518371 LCLAT1Q6UWP7 414 aa6.41□□□□□ -1.38
MRPS28-203ENST00000518371 ZNF852Q6ZMS4 543 aa6.41□□□□□ -1.38
MRPS28-203ENST00000518371 TPRG1Q6ZUI0 275 aa6.41□□□□□ -1.38
MRPS28-203ENST00000518371 GPRIN1Q7Z2K8 1008 aa6.41□□□□□ -1.38
MRPS28-203ENST00000518371 PIGZQ86VD9 579 aa6.41□□□□□ -1.38
MRPS28-203ENST00000518371 TTC8Q8TAM2 541 aa6.41□□□□□ -1.38
MRPS28-203ENST00000518371 SH3RF2Q8TEC5 729 aa6.41□□□□□ -1.38
MRPS28-203ENST00000518371 TFAP2BQ92481 460 aa6.41□□□□□ -1.38
MRPS28-203ENST00000518371 DNASE1L2Q92874 299 aa6.41□□□□□ -1.38
MRPS28-203ENST00000518371 UTP4Q969X6 686 aaKnown RBP6.41□□□□□ -1.38
MRPS28-203ENST00000518371 ZFYVE19Q96K21 471 aa6.41□□□□□ -1.38
MRPS28-203ENST00000518371 LRRC3BQ96PB8 259 aa6.41□□□□□ -1.38
MRPS28-203ENST00000518371 NELL2Q99435 816 aa6.41□□□□□ -1.38
MRPS28-203ENST00000518371 LSM14BQ9BX40 385 aaKnown RBP6.41□□□□□ -1.38
MRPS28-203ENST00000518371 CEP41Q9BYV8 373 aa6.41□□□□□ -1.38
MRPS28-203ENST00000518371 RNF38Q9H0F5 515 aa6.41□□□□□ -1.38
MRPS28-203ENST00000518371 PDCL3Q9H2J4 239 aa6.41□□□□□ -1.38
MRPS28-203ENST00000518371 CCSER2Q9H7U1 834 aa6.41□□□□□ -1.38
MRPS28-203ENST00000518371 TBC1D17Q9HA65 648 aa6.41□□□□□ -1.38
MRPS28-203ENST00000518371 PNPLA8Q9NP80 782 aa6.41□□□□□ -1.38
MRPS28-203ENST00000518371 HEBP1Q9NRV9 189 aa6.41□□□□□ -1.38
MRPS28-203ENST00000518371 DUS2Q9NX74 493 aaKnown RBP6.41□□□□□ -1.38
MRPS28-203ENST00000518371 SMPD4Q9NXE4 827 aa6.41□□□□□ -1.38
MRPS28-203ENST00000518371 STOML1Q9UBI4 398 aa6.41□□□□□ -1.38
MRPS28-203ENST00000518371 APEX2Q9UBZ4 518 aa6.41□□□□□ -1.38
MRPS28-203ENST00000518371 LIMA1Q9UHB6 759 aaKnown RBP6.41□□□□□ -1.38
MRPS28-203ENST00000518371 SCML2Q9UQR0 700 aa6.41□□□□□ -1.38
MRPS28-203ENST00000518371 CCL26Q9Y258 94 aa6.41□□□□□ -1.38
MRPS28-203ENST00000518371 MRPS17Q9Y2R5 130 aaKnown RBP6.41□□□□□ -1.38
MRPS28-203ENST00000518371 CPQQ9Y646 472 aa6.41□□□□□ -1.38
MRPS28-203ENST00000518371 NOTCH4Q99466 2003 aa6.4□□□□□ -1.38
MRPS28-203ENST00000518371 SPTBN5Q9NRC6 3674 aaKnown RBP6.4□□□□□ -1.38
MRPS28-203ENST00000518371 A0A1W2PQH9 124 aa6.4□□□□□ -1.38
MRPS28-203ENST00000518371 KANSL1LA0AUZ9 987 aa6.4□□□□□ -1.38
MRPS28-203ENST00000518371 FAM92AA1XBS5 289 aa6.4□□□□□ -1.38
MRPS28-203ENST00000518371 HMX2A2RU54 273 aa6.4□□□□□ -1.38
MRPS28-203ENST00000518371 FAM170BA6NMN3 283 aa6.4□□□□□ -1.38
MRPS28-203ENST00000518371 M0QYV0 167 aa6.4□□□□□ -1.38
MRPS28-203ENST00000518371 LEFTY2O00292 366 aa6.4□□□□□ -1.38
MRPS28-203ENST00000518371 TULP2O00295 520 aa6.4□□□□□ -1.38
MRPS28-203ENST00000518371 FOXN3O00409 490 aaPredicted RBP6.4□□□□□ -1.38
MRPS28-203ENST00000518371 XPO1O14980 1071 aaKnown RBP6.4□□□□□ -1.38
MRPS28-203ENST00000518371 NCAM2O15394 837 aa6.4□□□□□ -1.38
MRPS28-203ENST00000518371 CYP26A1O43174 497 aa6.4□□□□□ -1.38
MRPS28-203ENST00000518371 COCHO43405 550 aa6.4□□□□□ -1.38
MRPS28-203ENST00000518371 THAP12O43422 761 aa6.4□□□□□ -1.38
MRPS28-203ENST00000518371 TLR5O60602 858 aa6.4□□□□□ -1.38
MRPS28-203ENST00000518371 ZBED1O96006 694 aa6.4□□□□□ -1.38
MRPS28-203ENST00000518371 OAS1P00973 400 aaKnown RBP6.4□□□□□ -1.38
MRPS28-203ENST00000518371 ZDHHC11BP0C7U3 371 aa6.4□□□□□ -1.38
MRPS28-203ENST00000518371 SETSIPP0DME0 302 aa6.4□□□□□ -1.38
MRPS28-203ENST00000518371 RARGP13631 454 aa6.4□□□□□ -1.38
MRPS28-203ENST00000518371 LCP1P13796 627 aa6.4□□□□□ -1.38
MRPS28-203ENST00000518371 AOC1P19801 751 aa6.4□□□□□ -1.38
MRPS28-203ENST00000518371 CD72P21854 359 aa6.4□□□□□ -1.38
MRPS28-203ENST00000518371 GNA15P30679 374 aa6.4□□□□□ -1.38
MRPS28-203ENST00000518371 ATP5C1P36542 298 aaKnown RBP6.4□□□□□ -1.38
MRPS28-203ENST00000518371 RGS7P49802 495 aa6.4□□□□□ -1.38
MRPS28-203ENST00000518371 CLCN5P51795 746 aa6.4□□□□□ -1.38
MRPS28-203ENST00000518371 TKTL1P51854 596 aa6.4□□□□□ -1.38
MRPS28-203ENST00000518371 STARD6P59095 220 aa6.4□□□□□ -1.38
MRPS28-203ENST00000518371 BPIFB4P59827 614 aa6.4□□□□□ -1.38
MRPS28-203ENST00000518371 TPM4P67936 248 aa6.4□□□□□ -1.38
MRPS28-203ENST00000518371 SLC7A9P82251 487 aa6.4□□□□□ -1.38
MRPS28-203ENST00000518371 AMPD2Q01433 879 aa6.4□□□□□ -1.38
MRPS28-203ENST00000518371 UBXN1Q04323 297 aa6.4□□□□□ -1.38
MRPS28-203ENST00000518371 RUNX3Q13761 415 aa6.4□□□□□ -1.38
MRPS28-203ENST00000518371 RAPGEF1Q13905 1077 aa6.4□□□□□ -1.38
MRPS28-203ENST00000518371 MTF1Q14872 753 aa6.4□□□□□ -1.38
MRPS28-203ENST00000518371 UBXN2BQ14CS0 331 aa6.4□□□□□ -1.38
MRPS28-203ENST00000518371 NCAPHQ15003 741 aa6.4□□□□□ -1.38
MRPS28-203ENST00000518371 PDGFRLQ15198 375 aa6.4□□□□□ -1.38
MRPS28-203ENST00000518371 ITPRIPL2Q3MIP1 535 aa6.4□□□□□ -1.38
MRPS28-203ENST00000518371 FILIP1LQ4L180 1135 aa6.4□□□□□ -1.38
MRPS28-203ENST00000518371 C10orf120Q5SQS8 335 aa6.4□□□□□ -1.38
MRPS28-203ENST00000518371 KLHDC7AQ5VTJ3 777 aa6.4□□□□□ -1.38
MRPS28-203ENST00000518371 SNX30Q5VWJ9 437 aa6.4□□□□□ -1.38
MRPS28-203ENST00000518371 BTBD8Q5XKL5 378 aa6.4□□□□□ -1.38
MRPS28-203ENST00000518371 RSRC2Q7L4I2 434 aaKnown RBP6.4□□□□□ -1.38
MRPS28-203ENST00000518371 CCDC186Q7Z3E2 898 aa6.4□□□□□ -1.38
MRPS28-203ENST00000518371 VN1R5Q7Z5H4 357 aa6.4□□□□□ -1.38
MRPS28-203ENST00000518371 TADA2BQ86TJ2 420 aa6.4□□□□□ -1.38
MRPS28-203ENST00000518371 TTC30AQ86WT1 665 aa6.4□□□□□ -1.38
MRPS28-203ENST00000518371 DDX42Q86XP3 938 aaKnown RBP eCLIP6.4□□□□□ -1.38
MRPS28-203ENST00000518371 TRIM42Q8IWZ5 723 aa6.4□□□□□ -1.38
MRPS28-203ENST00000518371 SIX6OS1Q8N1H7 587 aa6.4□□□□□ -1.38
MRPS28-203ENST00000518371 ARHGAP18Q8N392 663 aa6.4□□□□□ -1.38
MRPS28-203ENST00000518371 ZNF606Q8WXB4 792 aa6.4□□□□□ -1.38
MRPS28-203ENST00000518371 FAM3CQ92520 227 aa6.4□□□□□ -1.38
MRPS28-203ENST00000518371 SECISBP2LQ93073 1101 aaKnown RBP6.4□□□□□ -1.38
MRPS28-203ENST00000518371 BPIFA3Q9BQP9 254 aa6.4□□□□□ -1.38
MRPS28-203ENST00000518371 ULBP1Q9BZM6 244 aa6.4□□□□□ -1.38
MRPS28-203ENST00000518371 C7orf69Q9H7B7 122 aa6.4□□□□□ -1.38
MRPS28-203ENST00000518371 C8orf33Q9H7E9 229 aaPredicted RBP6.4□□□□□ -1.38
MRPS28-203ENST00000518371 SIX2Q9NPC8 291 aa6.4□□□□□ -1.38
MRPS28-203ENST00000518371 TRPV5Q9NQA5 729 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms