RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 RAD23AP54725 363 aa12.56□□□□□ -0.4
PCDHGA6-201ENST00000517434 MRPS6P82932 125 aaKnown RBP12.56□□□□□ -0.4
PCDHGA6-201ENST00000517434 CHRNB3Q05901 458 aa12.56□□□□□ -0.4
PCDHGA6-201ENST00000517434 MCL1Q07820 350 aa12.56□□□□□ -0.4
PCDHGA6-201ENST00000517434 TRAF2Q12933 501 aa12.56□□□□□ -0.4
PCDHGA6-201ENST00000517434 PPIGQ13427 754 aaKnown RBP eCLIP12.56□□□□□ -0.4
PCDHGA6-201ENST00000517434 SLC45A4Q5BKX6 768 aa12.56□□□□□ -0.4
PCDHGA6-201ENST00000517434 KLHDC7AQ5VTJ3 777 aa12.56□□□□□ -0.4
PCDHGA6-201ENST00000517434 ZNF720Q7Z2F6 126 aa12.56□□□□□ -0.4
PCDHGA6-201ENST00000517434 SZRD1Q7Z422 152 aa12.56□□□□□ -0.4
PCDHGA6-201ENST00000517434 ARHGEF19Q8IW93 802 aa12.56□□□□□ -0.4
PCDHGA6-201ENST00000517434 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.56□□□□□ -0.4
PCDHGA6-201ENST00000517434 C19orf18Q8NEA5 215 aa12.56□□□□□ -0.4
PCDHGA6-201ENST00000517434 REXO4Q9GZR2 422 aaKnown RBP12.56□□□□□ -0.4
PCDHGA6-201ENST00000517434 IMPAD1Q9NX62 359 aa12.56□□□□□ -0.4
PCDHGA6-201ENST00000517434 NCAM2O15394 837 aa12.55□□□□□ -0.4
PCDHGA6-201ENST00000517434 UNC5CO95185 931 aa12.55□□□□□ -0.4
PCDHGA6-201ENST00000517434 FDPSP14324 419 aaKnown RBP12.55□□□□□ -0.4
PCDHGA6-201ENST00000517434 JAK1P23458 1154 aa12.55□□□□□ -0.4
PCDHGA6-201ENST00000517434 RARRES1P49788 294 aa12.55□□□□□ -0.4
PCDHGA6-201ENST00000517434 CBX3Q13185 183 aa12.55□□□□□ -0.4
PCDHGA6-201ENST00000517434 USP10Q14694 798 aaKnown RBP12.55□□□□□ -0.4
PCDHGA6-201ENST00000517434 CCNJLQ8IV13 435 aa12.55□□□□□ -0.4
PCDHGA6-201ENST00000517434 DEFB107AQ8IZN7 70 aa12.55□□□□□ -0.4
PCDHGA6-201ENST00000517434 MTMR14Q8NCE2 650 aa12.55□□□□□ -0.4
PCDHGA6-201ENST00000517434 ITFG2Q969R8 447 aa12.55□□□□□ -0.4
PCDHGA6-201ENST00000517434 CAMKK2Q96RR4 588 aa12.55□□□□□ -0.4
PCDHGA6-201ENST00000517434 MTMR12Q9C0I1 747 aa12.55□□□□□ -0.4
PCDHGA6-201ENST00000517434 GOLPH3Q9H4A6 298 aa12.55□□□□□ -0.4
PCDHGA6-201ENST00000517434 TMEM134Q9H6X4 195 aa12.55□□□□□ -0.4
PCDHGA6-201ENST00000517434 TMEM161AQ9NX61 479 aa12.55□□□□□ -0.4
PCDHGA6-201ENST00000517434 SFMBT1Q9UHJ3 866 aa12.55□□□□□ -0.4
PCDHGA6-201ENST00000517434 ITM2BQ9Y287 266 aa12.55□□□□□ -0.4
PCDHGA6-201ENST00000517434 SPACA6W5XKT8 324 aa12.55□□□□□ -0.4
PCDHGA6-201ENST00000517434 SF3B1O75533 1304 aaKnown RBP eCLIP12.55□□□□□ -0.4
PCDHGA6-201ENST00000517434 RIC1Q4ADV7 1423 aa12.55□□□□□ -0.4
PCDHGA6-201ENST00000517434 GLRA3O75311 464 aa12.55□□□□□ -0.4
PCDHGA6-201ENST00000517434 PDE9AO76083 593 aa12.55□□□□□ -0.4
PCDHGA6-201ENST00000517434 FKBP9O95302 570 aa12.55□□□□□ -0.4
PCDHGA6-201ENST00000517434 ATP5BP06576 529 aaKnown RBP12.55□□□□□ -0.4
PCDHGA6-201ENST00000517434 FLT3LGP49771 235 aa12.55□□□□□ -0.4
PCDHGA6-201ENST00000517434 RHBDL3P58872 404 aa12.55□□□□□ -0.4
PCDHGA6-201ENST00000517434 FCHO2Q0JRZ9 810 aa12.55□□□□□ -0.4
PCDHGA6-201ENST00000517434 CNGA2Q16280 664 aa12.55□□□□□ -0.4
PCDHGA6-201ENST00000517434 HIST2H2ACQ16777 129 aaPredicted RBP12.55□□□□□ -0.4
PCDHGA6-201ENST00000517434 HIST2H2AA3Q6FI13 130 aa12.55□□□□□ -0.4
PCDHGA6-201ENST00000517434 FKBP9P1Q75LS8 142 aa12.55□□□□□ -0.4
PCDHGA6-201ENST00000517434 UBA3Q8TBC4 463 aa12.55□□□□□ -0.4
PCDHGA6-201ENST00000517434 SMARCD1Q96GM5 515 aa12.55□□□□□ -0.4
PCDHGA6-201ENST00000517434 MYLK2Q9H1R3 596 aa12.55□□□□□ -0.4
PCDHGA6-201ENST00000517434 CTNNAL1Q9UBT7 734 aa12.55□□□□□ -0.4
PCDHGA6-201ENST00000517434 CARD8Q9Y2G2 431 aa12.55□□□□□ -0.4
PCDHGA6-201ENST00000517434 AAR2Q9Y312 384 aaKnown RBP12.55□□□□□ -0.4
PCDHGA6-201ENST00000517434 AK5Q9Y6K8 562 aa12.55□□□□□ -0.4
PCDHGA6-201ENST00000517434 DUSP10Q9Y6W6 482 aa12.55□□□□□ -0.4
PCDHGA6-201ENST00000517434 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.55□□□□□ -0.4
PCDHGA6-201ENST00000517434 PRPF4O43172 522 aaKnown RBP eCLIP12.55□□□□□ -0.4
PCDHGA6-201ENST00000517434 FGF19O95750 216 aa12.55□□□□□ -0.4
PCDHGA6-201ENST00000517434 CNTN2Q02246 1040 aa12.55□□□□□ -0.4
PCDHGA6-201ENST00000517434 RIPK1Q13546 671 aa12.55□□□□□ -0.4
PCDHGA6-201ENST00000517434 GIT2Q14161 759 aa12.55□□□□□ -0.4
PCDHGA6-201ENST00000517434 SPANXN2Q5MJ10 180 aa12.55□□□□□ -0.4
PCDHGA6-201ENST00000517434 ADCK2Q7Z695 626 aa12.55□□□□□ -0.4
PCDHGA6-201ENST00000517434 MIB1Q86YT6 1006 aa12.55□□□□□ -0.4
PCDHGA6-201ENST00000517434 PTPRN2Q92932 1015 aa12.55□□□□□ -0.4
PCDHGA6-201ENST00000517434 SLC4A9Q96Q91 983 aa12.55□□□□□ -0.4
PCDHGA6-201ENST00000517434 SENP2Q9HC62 589 aa12.55□□□□□ -0.4
PCDHGA6-201ENST00000517434 CASS4Q9NQ75 786 aa12.55□□□□□ -0.4
PCDHGA6-201ENST00000517434 GOLGA8TH3BQL2 631 aa12.54□□□□□ -0.4
PCDHGA6-201ENST00000517434 PIK3CDO00329 1044 aa12.54□□□□□ -0.4
PCDHGA6-201ENST00000517434 BAIAP3O94812 1187 aa12.54□□□□□ -0.4
PCDHGA6-201ENST00000517434 YWHAQP27348 245 aa12.54□□□□□ -0.4
PCDHGA6-201ENST00000517434 CYP24A1Q07973 514 aa12.54□□□□□ -0.4
PCDHGA6-201ENST00000517434 SPDYCQ5MJ68 293 aa12.54□□□□□ -0.4
PCDHGA6-201ENST00000517434 ARHGAP17Q68EM7 881 aa12.54□□□□□ -0.4
PCDHGA6-201ENST00000517434 ACOT1Q86TX2 421 aa12.54□□□□□ -0.4
PCDHGA6-201ENST00000517434 ACSF2Q96CM8 615 aaPredicted RBP12.54□□□□□ -0.4
PCDHGA6-201ENST00000517434 ZSWIM1Q9BR11 485 aa12.54□□□□□ -0.4
PCDHGA6-201ENST00000517434 CHID1Q9BWS9 393 aa12.54□□□□□ -0.4
PCDHGA6-201ENST00000517434 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.54□□□□□ -0.4
PCDHGA6-201ENST00000517434 TRIM39Q9HCM9 518 aa12.54□□□□□ -0.4
PCDHGA6-201ENST00000517434 NMRK1Q9NWW6 199 aa12.54□□□□□ -0.4
PCDHGA6-201ENST00000517434 RSL24D1Q9UHA3 163 aaKnown RBP12.54□□□□□ -0.4
PCDHGA6-201ENST00000517434 VAV1P15498 845 aa12.54□□□□□ -0.4
PCDHGA6-201ENST00000517434 EIF4BP23588 611 aaKnown RBP12.54□□□□□ -0.4
PCDHGA6-201ENST00000517434 DNAJB2P25686 324 aa12.54□□□□□ -0.4
PCDHGA6-201ENST00000517434 TRIM71Q2Q1W2 868 aaKnown RBP12.54□□□□□ -0.4
PCDHGA6-201ENST00000517434 SPRYD7Q5W111 196 aa12.54□□□□□ -0.4
PCDHGA6-201ENST00000517434 ACAD10Q6JQN1 1059 aa12.54□□□□□ -0.4
PCDHGA6-201ENST00000517434 CXCL17Q6UXB2 119 aa12.54□□□□□ -0.4
PCDHGA6-201ENST00000517434 TMC3Q7Z5M5 1100 aa12.54□□□□□ -0.4
PCDHGA6-201ENST00000517434 SLC25A41Q8N5S1 370 aa12.54□□□□□ -0.4
PCDHGA6-201ENST00000517434 APBB2Q92870 758 aa12.54□□□□□ -0.4
PCDHGA6-201ENST00000517434 DGCR14Q96DF8 476 aaKnown RBP12.54□□□□□ -0.4
PCDHGA6-201ENST00000517434 TMEM176AQ96HP8 235 aa12.54□□□□□ -0.4
PCDHGA6-201ENST00000517434 FAR2Q96K12 515 aa12.54□□□□□ -0.4
PCDHGA6-201ENST00000517434 SERPINB11Q96P15 392 aa12.54□□□□□ -0.4
PCDHGA6-201ENST00000517434 IARS2Q9NSE4 1012 aaKnown RBP12.54□□□□□ -0.4
PCDHGA6-201ENST00000517434 DDX43Q9NXZ2 648 aaKnown RBP12.54□□□□□ -0.4
PCDHGA6-201ENST00000517434 VPS28Q9UK41 221 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms