RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 WWOXQ9NZC7 414 aa3.73□□□□□ -1.81
HERC4-215ENST00000515753 ANAPC4Q9UJX5 808 aa3.73□□□□□ -1.81
HERC4-215ENST00000515753 SIRT4Q9Y6E7 314 aaPredicted RBP3.73□□□□□ -1.81
HERC4-215ENST00000515753 SMARCA4P51532 1647 aa3.73□□□□□ -1.81
HERC4-215ENST00000515753 SPATA31A5Q5VU36 1347 aa3.72□□□□□ -1.81
HERC4-215ENST00000515753 SPATA31A7Q8IWB4 1347 aa3.72□□□□□ -1.81
HERC4-215ENST00000515753 PRR23D1E9PI22 279 aaPredicted RBP3.72□□□□□ -1.81
HERC4-215ENST00000515753 PODXLO00592 558 aa3.72□□□□□ -1.81
HERC4-215ENST00000515753 PCDH17O14917 1159 aa3.72□□□□□ -1.81
HERC4-215ENST00000515753 FYB1O15117 783 aa3.72□□□□□ -1.81
HERC4-215ENST00000515753 NPHP1O15259 732 aa3.72□□□□□ -1.81
HERC4-215ENST00000515753 CTIFO43310 598 aaKnown RBP3.72□□□□□ -1.81
HERC4-215ENST00000515753 TCEA3O75764 348 aa3.72□□□□□ -1.81
HERC4-215ENST00000515753 NTSR2O95665 410 aa3.72□□□□□ -1.81
HERC4-215ENST00000515753 ALPLP05186 524 aa3.72□□□□□ -1.81
HERC4-215ENST00000515753 PRR23D2P0DMB1 279 aaPredicted RBP3.72□□□□□ -1.81
HERC4-215ENST00000515753 FAM83BQ5T0W9 1011 aa3.72□□□□□ -1.81
HERC4-215ENST00000515753 CCDC144NLQ6NUI1 221 aa3.72□□□□□ -1.81
HERC4-215ENST00000515753 FBXO38Q6PIJ6 1188 aa3.72□□□□□ -1.81
HERC4-215ENST00000515753 PIK3AP1Q6ZUJ8 805 aa3.72□□□□□ -1.81
HERC4-215ENST00000515753 P3H2Q8IVL5 708 aa3.72□□□□□ -1.81
HERC4-215ENST00000515753 FAM186BQ8IYM0 893 aa3.72□□□□□ -1.81
HERC4-215ENST00000515753 BCAS4Q8TDM0 211 aa3.72□□□□□ -1.81
HERC4-215ENST00000515753 IGFBPL1Q8WX77 278 aa3.72□□□□□ -1.81
HERC4-215ENST00000515753 KIAA1191Q96A73 305 aa3.72□□□□□ -1.81
HERC4-215ENST00000515753 GRAMD1AQ96CP6 724 aa3.72□□□□□ -1.81
HERC4-215ENST00000515753 TMEM41AQ96HV5 264 aa3.72□□□□□ -1.81
HERC4-215ENST00000515753 VCPIP1Q96JH7 1222 aa3.72□□□□□ -1.81
HERC4-215ENST00000515753 GATA5Q9BWX5 397 aaPredicted RBP3.72□□□□□ -1.81
HERC4-215ENST00000515753 CDCP1Q9H5V8 836 aa3.72□□□□□ -1.81
HERC4-215ENST00000515753 USP29Q9HBJ7 922 aa3.72□□□□□ -1.81
HERC4-215ENST00000515753 BCCIPQ9P287 314 aaKnown RBP eCLIP3.72□□□□□ -1.81
HERC4-215ENST00000515753 UBE2J1Q9Y385 318 aaPredicted RBP3.72□□□□□ -1.81
HERC4-215ENST00000515753 LY6G6EA0A0G2JKS1 128 aa3.71□□□□□ -1.82
HERC4-215ENST00000515753 CD8B2A6NJW9 211 aa3.71□□□□□ -1.82
HERC4-215ENST00000515753 ZSCAN9O15535 394 aaPredicted RBP3.71□□□□□ -1.82
HERC4-215ENST00000515753 SGPL1O95470 568 aa3.71□□□□□ -1.82
HERC4-215ENST00000515753 NPPBP16860 134 aa3.71□□□□□ -1.82
HERC4-215ENST00000515753 CD53P19397 219 aa3.71□□□□□ -1.82
HERC4-215ENST00000515753 DRD1P21728 446 aa3.71□□□□□ -1.82
HERC4-215ENST00000515753 TACR3P29371 465 aa3.71□□□□□ -1.82
HERC4-215ENST00000515753 IGHMBP2P38935 993 aaKnown RBP3.71□□□□□ -1.82
HERC4-215ENST00000515753 GHRHRQ02643 423 aa3.71□□□□□ -1.82
HERC4-215ENST00000515753 ARHGAP15Q53QZ3 475 aa3.71□□□□□ -1.82
HERC4-215ENST00000515753 AWAT1Q58HT5 328 aa3.71□□□□□ -1.82
HERC4-215ENST00000515753 ERAP2Q6P179 960 aa3.71□□□□□ -1.82
HERC4-215ENST00000515753 MSANTD2Q6P1R3 559 aa3.71□□□□□ -1.82
HERC4-215ENST00000515753 ACSM6Q6P461 480 aa3.71□□□□□ -1.82
HERC4-215ENST00000515753 SRLQ86TD4 932 aa3.71□□□□□ -1.82
HERC4-215ENST00000515753 RASGRP3Q8IV61 690 aa3.71□□□□□ -1.82
HERC4-215ENST00000515753 LAS2Q8IYD9 372 aa3.71□□□□□ -1.82
HERC4-215ENST00000515753 SMRP1Q8NCR6 262 aa3.71□□□□□ -1.82
HERC4-215ENST00000515753 MYRIPQ8NFW9 859 aa3.71□□□□□ -1.82
HERC4-215ENST00000515753 PARD3BQ8TEW8 1205 aa3.71□□□□□ -1.82
HERC4-215ENST00000515753 RSC1A1Q92681 617 aa3.71□□□□□ -1.82
HERC4-215ENST00000515753 MARK4Q96L34 752 aa3.71□□□□□ -1.82
HERC4-215ENST00000515753 SENP7Q9BQF6 1050 aa3.71□□□□□ -1.82
HERC4-215ENST00000515753 TTLL2Q9BWV7 592 aa3.71□□□□□ -1.82
HERC4-215ENST00000515753 NUAK2Q9H093 628 aa3.71□□□□□ -1.82
HERC4-215ENST00000515753 PTPRHQ9HD43 1115 aa3.71□□□□□ -1.82
HERC4-215ENST00000515753 PLCB1Q9NQ66 1216 aa3.71□□□□□ -1.82
HERC4-215ENST00000515753 FNIP2Q9P278 1114 aa3.71□□□□□ -1.82
HERC4-215ENST00000515753 PNMA2Q9UL42 364 aa3.71□□□□□ -1.82
HERC4-215ENST00000515753 NFU1Q9UMS0 254 aa3.71□□□□□ -1.82
HERC4-215ENST00000515753 DAAM1Q9Y4D1 1078 aa3.71□□□□□ -1.82
HERC4-215ENST00000515753 CEP164Q9UPV0 1460 aa3.71□□□□□ -1.82
HERC4-215ENST00000515753 GOLGA6L3A6NEY3 463 aa3.7□□□□□ -1.82
HERC4-215ENST00000515753 USP12O75317 370 aa3.7□□□□□ -1.82
HERC4-215ENST00000515753 CENPBP07199 599 aaPredicted RBP3.7□□□□□ -1.82
HERC4-215ENST00000515753 ITGA5P08648 1049 aa3.7□□□□□ -1.82
HERC4-215ENST00000515753 TMEM191BP0C7N4 346 aa3.7□□□□□ -1.82
HERC4-215ENST00000515753 NDUFS1P28331 727 aa3.7□□□□□ -1.82
HERC4-215ENST00000515753 HOXD12P35452 270 aa3.7□□□□□ -1.82
HERC4-215ENST00000515753 GSTM5P46439 218 aa3.7□□□□□ -1.82
HERC4-215ENST00000515753 RPS13P62277 151 aaKnown RBP3.7□□□□□ -1.82
HERC4-215ENST00000515753 ZNF91Q05481 1191 aa3.7□□□□□ -1.82
HERC4-215ENST00000515753 SEMA3BQ13214 749 aa3.7□□□□□ -1.82
HERC4-215ENST00000515753 CSHL1Q14406 222 aa3.7□□□□□ -1.82
HERC4-215ENST00000515753 TWIST1Q15672 202 aa3.7□□□□□ -1.82
HERC4-215ENST00000515753 CNGA3Q16281 694 aa3.7□□□□□ -1.82
HERC4-215ENST00000515753 GLE1Q53GS7 698 aaKnown RBP3.7□□□□□ -1.82
HERC4-215ENST00000515753 CC2D1BQ5T0F9 858 aaKnown RBP3.7□□□□□ -1.82
HERC4-215ENST00000515753 C10orf25Q5T742 122 aa3.7□□□□□ -1.82
HERC4-215ENST00000515753 CLEC4GQ6UXB4 293 aa3.7□□□□□ -1.82
HERC4-215ENST00000515753 SMAP1Q8IYB5 467 aaPredicted RBP3.7□□□□□ -1.82
HERC4-215ENST00000515753 ASB12Q8WXK4 309 aa3.7□□□□□ -1.82
HERC4-215ENST00000515753 AKAP1Q92667 903 aaKnown RBP eCLIP3.7□□□□□ -1.82
HERC4-215ENST00000515753 CUL5Q93034 780 aa3.7□□□□□ -1.82
HERC4-215ENST00000515753 PRR11Q96HE9 360 aaPredicted RBP3.7□□□□□ -1.82
HERC4-215ENST00000515753 ZNF845Q96IR2 970 aaPredicted RBP3.7□□□□□ -1.82
HERC4-215ENST00000515753 SIGLEC11Q96RL6 698 aa3.7□□□□□ -1.82
HERC4-215ENST00000515753 HERPUD2Q9BSE4 406 aa3.7□□□□□ -1.82
HERC4-215ENST00000515753 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.7□□□□□ -1.82
HERC4-215ENST00000515753 TP63Q9H3D4 680 aaPredicted RBP3.7□□□□□ -1.82
HERC4-215ENST00000515753 PPCSQ9HAB8 311 aa3.7□□□□□ -1.82
HERC4-215ENST00000515753 ERVK-5Q9HDB9 667 aa3.7□□□□□ -1.82
HERC4-215ENST00000515753 ARFGAP3Q9NP61 516 aa3.7□□□□□ -1.82
HERC4-215ENST00000515753 FSCN3Q9NQT6 498 aa3.7□□□□□ -1.82
HERC4-215ENST00000515753 TMEM184CQ9NVA4 438 aa3.7□□□□□ -1.82
HERC4-215ENST00000515753 ZNF69Q9UC07 566 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms