RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 EIF4E1BA6NMX2 242 aaKnown RBP8.56□□□□□ -1.04
HTT-208ENST00000510626 FOXN1O15353 648 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 MAGEC1O60732 1142 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 TFE3P19532 575 aaPredicted RBP8.56□□□□□ -1.04
HTT-208ENST00000510626 CUL2Q13617 745 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 HECTD3Q5T447 861 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 AGR3Q8TD06 166 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 GRIP2Q9C0E4 1043 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 DHX33Q9H6R0 707 aaKnown RBP8.56□□□□□ -1.04
HTT-208ENST00000510626 CYLDQ9NQC7 956 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 RPRD1BQ9NQG5 326 aaKnown RBP8.56□□□□□ -1.04
HTT-208ENST00000510626 ZNF701M0R085 212 aaPredicted RBP8.56□□□□□ -1.04
HTT-208ENST00000510626 ZBTB39O15060 712 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 TCF4P15884 667 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 ALOX12P18054 663 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 BGNP21810 368 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 MAPK9P45984 424 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 HERVK_113P62684 666 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 DYNLL1P63167 89 aaKnown RBP8.56□□□□□ -1.04
HTT-208ENST00000510626 QRICH1Q2TAL8 776 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 AGKQ53H12 422 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 WWP2O00308 870 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 HAT1O14929 419 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 ERBB2P04626 1255 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 CDH18Q13634 790 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 PDGFCQ9NRA1 345 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 EPHB2P29323 1055 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 OXCT1P55809 520 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 LGALS3BPQ08380 585 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 GADL1Q6ZQY3 521 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.56□□□□□ -1.04
HTT-208ENST00000510626 GPN3Q9UHW5 284 aaPredicted RBP8.56□□□□□ -1.04
HTT-208ENST00000510626 PROSCO94903 275 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 CPA2P48052 419 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 GCNT1Q02742 428 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 TBC1D21Q8IYX1 336 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 CENPIQ92674 756 aaPredicted RBP8.56□□□□□ -1.04
HTT-208ENST00000510626 KLHL28Q9NXS3 571 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 KNTC1P50748 2209 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 MYO3AQ8NEV4 1616 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 CITO14578 2027 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 DPY19L2Q6NUT2 758 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 PROSER1Q86XN7 944 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 MYO1HQ8N1T3 1032 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 RNASE11Q8TAA1 199 aaKnown RBP8.56□□□□□ -1.04
HTT-208ENST00000510626 DPF2Q92785 391 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 NDNQ99608 321 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 MRPL57Q9BQC6 102 aaKnown RBP8.56□□□□□ -1.04
HTT-208ENST00000510626 KIFC1Q9BW19 673 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 RACGAP1Q9H0H5 632 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 PSMD13Q9UNM6 376 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 ERGIC3Q9Y282 383 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 GUCY1A2P33402 732 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 ZNF420Q8TAQ5 688 aaPredicted RBP8.56□□□□□ -1.04
HTT-208ENST00000510626 SH3RF3Q8TEJ3 882 aaPredicted RBP8.56□□□□□ -1.04
HTT-208ENST00000510626 ZNF341Q9BYN7 854 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 USP17L15C9J2P7 530 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 USP17L13C9JLJ4 530 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 USP17L11C9JVI0 530 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 USP17L18D6R9N7 530 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 USP17L22D6RA61 530 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 USP17L17D6RBQ6 530 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 USP17L19D6RCP7 530 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 USP17L20D6RJB6 530 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 SEC24AO95486 1093 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 HLA-DRAP01903 254 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 IFNA16P05015 189 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 TSPAN19P0C672 248 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 CASP1P29466 404 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 CDK18Q07002 472 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 USP17L24Q0WX57 530 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 USP17L6PQ6QN14 398 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 TLR10Q9BXR5 811 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 ITM2BQ9Y287 266 aa8.56□□□□□ -1.04
HTT-208ENST00000510626 HECW2Q9P2P5 1572 aa8.55□□□□□ -1.04
HTT-208ENST00000510626 FRMPD4Q14CM0 1322 aa8.55□□□□□ -1.04
HTT-208ENST00000510626 CCNE2O96020 404 aa8.55□□□□□ -1.04
HTT-208ENST00000510626 CYP1A1P04798 512 aaPredicted RBP8.55□□□□□ -1.04
HTT-208ENST00000510626 PRKCBP05771 671 aa8.55□□□□□ -1.04
HTT-208ENST00000510626 CDC42P60953 191 aa8.55□□□□□ -1.04
HTT-208ENST00000510626 ATP1A4Q13733 1029 aa8.55□□□□□ -1.04
HTT-208ENST00000510626 OR56A4Q8NGH8 313 aa8.55□□□□□ -1.04
HTT-208ENST00000510626 HM13Q8TCT9 377 aa8.55□□□□□ -1.04
HTT-208ENST00000510626 MROH2AA6NES4 1674 aa8.55□□□□□ -1.04
HTT-208ENST00000510626 NR5A2O00482 541 aa8.55□□□□□ -1.04
HTT-208ENST00000510626 UGT2B11O75310 529 aa8.55□□□□□ -1.04
HTT-208ENST00000510626 PTX3P26022 381 aaPredicted RBP8.55□□□□□ -1.04
HTT-208ENST00000510626 FAUP35544 74 aaKnown RBP8.55□□□□□ -1.04
HTT-208ENST00000510626 MAPKAPK2P49137 400 aa8.55□□□□□ -1.04
HTT-208ENST00000510626 NPY2RP49146 381 aa8.55□□□□□ -1.04
HTT-208ENST00000510626 FBXW4P57775 412 aa8.55□□□□□ -1.04
HTT-208ENST00000510626 MPP3Q13368 585 aa8.55□□□□□ -1.04
HTT-208ENST00000510626 PTF1AQ7RTS3 328 aa8.55□□□□□ -1.04
HTT-208ENST00000510626 USP18Q9UMW8 372 aa8.55□□□□□ -1.04
HTT-208ENST00000510626 E9PBE3 544 aa8.55□□□□□ -1.04
HTT-208ENST00000510626 HMBSP08397 361 aa8.55□□□□□ -1.04
HTT-208ENST00000510626 SLC26A3P40879 764 aa8.55□□□□□ -1.04
HTT-208ENST00000510626 GUCA1AP43080 201 aaPredicted RBP8.55□□□□□ -1.04
HTT-208ENST00000510626 CCNG1P51959 295 aa8.55□□□□□ -1.04
HTT-208ENST00000510626 IL5RAQ01344 420 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms