RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 TUFT1Q9NNX1 390 aa5□□□□□ -1.61
NUP54-206ENST00000508465 DDX19AQ9NUU7 478 aaKnown RBP5□□□□□ -1.61
NUP54-206ENST00000508465 PIN4Q9Y237 131 aaKnown RBP5□□□□□ -1.61
NUP54-206ENST00000508465 KIF3AQ9Y496 699 aa5□□□□□ -1.61
NUP54-206ENST00000508465 ZSCAN21Q9Y5A6 473 aaPredicted RBP5□□□□□ -1.61
NUP54-206ENST00000508465 B3GALT1Q9Y5Z6 326 aa5□□□□□ -1.61
NUP54-206ENST00000508465 CLIC4Q9Y696 253 aa5□□□□□ -1.61
NUP54-206ENST00000508465 ADGRA3Q8IWK6 1321 aa4.99□□□□□ -1.61
NUP54-206ENST00000508465 WDR81Q562E7 1941 aa4.99□□□□□ -1.61
NUP54-206ENST00000508465 TTC3P53804 2025 aa4.99□□□□□ -1.61
NUP54-206ENST00000508465 MYO7AQ13402 2215 aa4.99□□□□□ -1.61
NUP54-206ENST00000508465 A0A0U1RQF3 1178 aa4.99□□□□□ -1.61
NUP54-206ENST00000508465 ARHGEF35A5YM69 484 aa4.99□□□□□ -1.61
NUP54-206ENST00000508465 VWA3AA6NCI4 1184 aa4.99□□□□□ -1.61
NUP54-206ENST00000508465 LRRIQ4A6NIV6 560 aa4.99□□□□□ -1.61
NUP54-206ENST00000508465 E9PMD0 336 aa4.99□□□□□ -1.61
NUP54-206ENST00000508465 INO80B-WBP1J3KQ70 363 aa4.99□□□□□ -1.61
NUP54-206ENST00000508465 PER2O15055 1255 aa4.99□□□□□ -1.61
NUP54-206ENST00000508465 ASAP2O43150 1006 aa4.99□□□□□ -1.61
NUP54-206ENST00000508465 B4GALT5O43286 388 aa4.99□□□□□ -1.61
NUP54-206ENST00000508465 RECQL4O94761 1208 aa4.99□□□□□ -1.61
NUP54-206ENST00000508465 LYPLA2O95372 231 aa4.99□□□□□ -1.61
NUP54-206ENST00000508465 XRCC6P12956 609 aaKnown RBP eCLIP4.99□□□□□ -1.61
NUP54-206ENST00000508465 ATF7P17544 494 aaPredicted RBP4.99□□□□□ -1.61
NUP54-206ENST00000508465 CYP11B2P19099 503 aa4.99□□□□□ -1.61
NUP54-206ENST00000508465 SYT1P21579 422 aa4.99□□□□□ -1.61
NUP54-206ENST00000508465 GLRA2P23416 452 aa4.99□□□□□ -1.61
NUP54-206ENST00000508465 MARCKSP29966 332 aaPredicted RBP4.99□□□□□ -1.61
NUP54-206ENST00000508465 PTENP60484 403 aa4.99□□□□□ -1.61
NUP54-206ENST00000508465 MRPS5P82675 430 aaKnown RBP4.99□□□□□ -1.61
NUP54-206ENST00000508465 CDC42EP1Q00587 391 aa4.99□□□□□ -1.61
NUP54-206ENST00000508465 CAPSQ13938 189 aa4.99□□□□□ -1.61
NUP54-206ENST00000508465 CAMK1Q14012 370 aa4.99□□□□□ -1.61
NUP54-206ENST00000508465 DHX8Q14562 1220 aaKnown RBP4.99□□□□□ -1.61
NUP54-206ENST00000508465 CLUL1Q15846 466 aa4.99□□□□□ -1.61
NUP54-206ENST00000508465 SPECC1Q5M775 1068 aa4.99□□□□□ -1.61
NUP54-206ENST00000508465 USP49Q70CQ1 688 aa4.99□□□□□ -1.61
NUP54-206ENST00000508465 HTR3DQ70Z44 454 aa4.99□□□□□ -1.61
NUP54-206ENST00000508465 RBM23Q86U06 439 aaKnown RBP4.99□□□□□ -1.61
NUP54-206ENST00000508465 ADGRG3Q86Y34 549 aa4.99□□□□□ -1.61
NUP54-206ENST00000508465 ELOA2Q8IYF1 753 aaPredicted RBP4.99□□□□□ -1.61
NUP54-206ENST00000508465 EXOC8Q8IYI6 725 aa4.99□□□□□ -1.61
NUP54-206ENST00000508465 CMTR2Q8IYT2 770 aaKnown RBP4.99□□□□□ -1.61
NUP54-206ENST00000508465 IGSF22Q8N9C0 903 aa4.99□□□□□ -1.61
NUP54-206ENST00000508465 PLA2G15Q8NCC3 412 aa4.99□□□□□ -1.61
NUP54-206ENST00000508465 ERMNQ8TAM6 284 aa4.99□□□□□ -1.61
NUP54-206ENST00000508465 TCP11Q8WWU5 503 aa4.99□□□□□ -1.61
NUP54-206ENST00000508465 PGBD4Q96DM1 585 aa4.99□□□□□ -1.61
NUP54-206ENST00000508465 MRPL38Q96DV4 380 aaKnown RBP4.99□□□□□ -1.61
NUP54-206ENST00000508465 ZNF512Q96ME7 567 aaPredicted RBP4.99□□□□□ -1.61
NUP54-206ENST00000508465 FAM193BQ96PV7 902 aaPredicted RBP4.99□□□□□ -1.61
NUP54-206ENST00000508465 ASB2Q96Q27 587 aa4.99□□□□□ -1.61
NUP54-206ENST00000508465 FOXB1Q99853 325 aa4.99□□□□□ -1.61
NUP54-206ENST00000508465 MLST8Q9BVC4 326 aa4.99□□□□□ -1.61
NUP54-206ENST00000508465 KIFC3Q9BVG8 833 aa4.99□□□□□ -1.61
NUP54-206ENST00000508465 APOL6Q9BWW8 343 aa4.99□□□□□ -1.61
NUP54-206ENST00000508465 EIF2AQ9BY44 585 aaKnown RBP4.99□□□□□ -1.61
NUP54-206ENST00000508465 PANK2Q9BZ23 570 aa4.99□□□□□ -1.61
NUP54-206ENST00000508465 INO80BQ9C086 356 aaPredicted RBP4.99□□□□□ -1.61
NUP54-206ENST00000508465 BHMT2Q9H2M3 363 aa4.99□□□□□ -1.61
NUP54-206ENST00000508465 TOR3AQ9H497 397 aa4.99□□□□□ -1.61
NUP54-206ENST00000508465 CWH43Q9H720 699 aa4.99□□□□□ -1.61
NUP54-206ENST00000508465 CYP4F11Q9HBI6 524 aa4.99□□□□□ -1.61
NUP54-206ENST00000508465 C1orf112Q9NSG2 853 aa4.99□□□□□ -1.61
NUP54-206ENST00000508465 TMEM161AQ9NX61 479 aa4.99□□□□□ -1.61
NUP54-206ENST00000508465 MAGEL2Q9UJ55 1249 aa4.99□□□□□ -1.61
NUP54-206ENST00000508465 DNM3Q9UQ16 869 aa4.99□□□□□ -1.61
NUP54-206ENST00000508465 HES2Q9Y543 173 aa4.99□□□□□ -1.61
NUP54-206ENST00000508465 PCDHB2Q9Y5E7 798 aa4.99□□□□□ -1.61
NUP54-206ENST00000508465 SIP14410 1827 aa4.99□□□□□ -1.61
NUP54-206ENST00000508465 MICAL3Q7RTP6 2002 aa4.99□□□□□ -1.61
NUP54-206ENST00000508465 CCDC169A6NNP5 214 aa4.98□□□□□ -1.61
NUP54-206ENST00000508465 H3BQ06 376 aaPredicted RBP4.98□□□□□ -1.61
NUP54-206ENST00000508465 LINC01565O15544 149 aa4.98□□□□□ -1.61
NUP54-206ENST00000508465 DAPK3O43293 454 aa4.98□□□□□ -1.61
NUP54-206ENST00000508465 TSPAN1O60635 241 aa4.98□□□□□ -1.61
NUP54-206ENST00000508465 OFD1O75665 1012 aa4.98□□□□□ -1.61
NUP54-206ENST00000508465 FGF18O76093 207 aa4.98□□□□□ -1.61
NUP54-206ENST00000508465 NPTXRO95502 500 aa4.98□□□□□ -1.61
NUP54-206ENST00000508465 CXCL14O95715 111 aa4.98□□□□□ -1.61
NUP54-206ENST00000508465 POMCP01189 267 aa4.98□□□□□ -1.61
NUP54-206ENST00000508465 JUNP05412 331 aaKnown RBP4.98□□□□□ -1.61
NUP54-206ENST00000508465 RB1P06400 928 aa4.98□□□□□ -1.61
NUP54-206ENST00000508465 VSIG10L2P0DP72 767 aa4.98□□□□□ -1.61
NUP54-206ENST00000508465 ARF4P18085 180 aaPredicted RBP4.98□□□□□ -1.61
NUP54-206ENST00000508465 KCNA5P22460 613 aa4.98□□□□□ -1.61
NUP54-206ENST00000508465 SFPQP23246 707 aaKnown RBP eCLIP4.98□□□□□ -1.61
NUP54-206ENST00000508465 AKAP5P24588 427 aa4.98□□□□□ -1.61
NUP54-206ENST00000508465 BCAR1P56945 870 aa4.98□□□□□ -1.61
NUP54-206ENST00000508465 ROM1Q03395 351 aa4.98□□□□□ -1.61
NUP54-206ENST00000508465 RNASELQ05823 741 aaKnown RBP4.98□□□□□ -1.61
NUP54-206ENST00000508465 MBTD1Q05BQ5 628 aa4.98□□□□□ -1.61
NUP54-206ENST00000508465 HYAL1Q12794 435 aa4.98□□□□□ -1.61
NUP54-206ENST00000508465 RESTQ13127 1097 aa4.98□□□□□ -1.61
NUP54-206ENST00000508465 TFDP1Q14186 410 aa4.98□□□□□ -1.61
NUP54-206ENST00000508465 MXD4Q14582 209 aaPredicted RBP4.98□□□□□ -1.61
NUP54-206ENST00000508465 PTPROQ16827 1216 aa4.98□□□□□ -1.61
NUP54-206ENST00000508465 TIGD2Q4W5G0 525 aa4.98□□□□□ -1.61
NUP54-206ENST00000508465 RILPL1Q5EBL4 403 aa4.98□□□□□ -1.61
NUP54-206ENST00000508465 NOMO2Q5JPE7 1267 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms