RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 LAMP2P13473 410 aa14.69□□□□□ -0.06
RNF4-208ENST00000507247 SLC6A4P31645 630 aa14.69□□□□□ -0.06
RNF4-208ENST00000507247 L1CAMP32004 1257 aa14.69□□□□□ -0.06
RNF4-208ENST00000507247 HARS2P49590 506 aaKnown RBP14.69□□□□□ -0.06
RNF4-208ENST00000507247 TFF2Q03403 129 aa14.69□□□□□ -0.06
RNF4-208ENST00000507247 SEMA3BQ13214 749 aa14.69□□□□□ -0.06
RNF4-208ENST00000507247 DPYSL2Q16555 572 aa14.69□□□□□ -0.06
RNF4-208ENST00000507247 FAM133BQ5BKY9 247 aaKnown RBP14.69□□□□□ -0.06
RNF4-208ENST00000507247 MS4A13Q5J8X5 152 aa14.69□□□□□ -0.06
RNF4-208ENST00000507247 EFHC2Q5JST6 749 aa14.69□□□□□ -0.06
RNF4-208ENST00000507247 FAM72AQ5TYM5 149 aa14.69□□□□□ -0.06
RNF4-208ENST00000507247 FAM72DQ6L9T8 149 aa14.69□□□□□ -0.06
RNF4-208ENST00000507247 HTR3DQ70Z44 454 aa14.69□□□□□ -0.06
RNF4-208ENST00000507247 ANKS1BQ7Z6G8 1248 aa14.69□□□□□ -0.06
RNF4-208ENST00000507247 C14orf80Q86SX3 495 aa14.69□□□□□ -0.06
RNF4-208ENST00000507247 FAM72BQ86X60 149 aa14.69□□□□□ -0.06
RNF4-208ENST00000507247 DDX42Q86XP3 938 aaKnown RBP eCLIP14.69□□□□□ -0.06
RNF4-208ENST00000507247 PSTKQ8IV42 348 aaKnown RBP14.69□□□□□ -0.06
RNF4-208ENST00000507247 KATNAL2Q8IYT4 538 aa14.69□□□□□ -0.06
RNF4-208ENST00000507247 CELF5Q8N6W0 485 aaKnown RBP14.69□□□□□ -0.06
RNF4-208ENST00000507247 HAPLN3Q96S86 360 aa14.69□□□□□ -0.06
RNF4-208ENST00000507247 PSMB7Q99436 277 aa14.69□□□□□ -0.06
RNF4-208ENST00000507247 NAPGQ99747 312 aaPredicted RBP14.69□□□□□ -0.06
RNF4-208ENST00000507247 SIK2Q9H0K1 926 aa14.69□□□□□ -0.06
RNF4-208ENST00000507247 OSBPL2Q9H1P3 480 aa14.69□□□□□ -0.06
RNF4-208ENST00000507247 KIF9Q9HAQ2 790 aa14.69□□□□□ -0.06
RNF4-208ENST00000507247 PCDH18Q9HCL0 1135 aa14.69□□□□□ -0.06
RNF4-208ENST00000507247 DDX56Q9NY93 547 aaKnown RBP14.69□□□□□ -0.06
RNF4-208ENST00000507247 LRRD1A4D1F6 860 aa14.68□□□□□ -0.06
RNF4-208ENST00000507247 C3orf70A6NLC5 250 aaPredicted RBP14.68□□□□□ -0.06
RNF4-208ENST00000507247 KDELR1P24390 212 aa14.68□□□□□ -0.06
RNF4-208ENST00000507247 CDH6P55285 790 aa14.68□□□□□ -0.06
RNF4-208ENST00000507247 RWDD2BP57060 319 aa14.68□□□□□ -0.06
RNF4-208ENST00000507247 MMRN1Q13201 1228 aa14.68□□□□□ -0.06
RNF4-208ENST00000507247 ZNF211Q13398 564 aaPredicted RBP14.68□□□□□ -0.06
RNF4-208ENST00000507247 SMAD2Q15796 467 aaKnown RBP14.68□□□□□ -0.06
RNF4-208ENST00000507247 ZFYVE27Q5T4F4 411 aa14.68□□□□□ -0.06
RNF4-208ENST00000507247 RAP1GAP2Q684P5 730 aa14.68□□□□□ -0.06
RNF4-208ENST00000507247 TANGO2Q6ICL3 276 aa14.68□□□□□ -0.06
RNF4-208ENST00000507247 AADACL2Q6P093 401 aa14.68□□□□□ -0.06
RNF4-208ENST00000507247 BBS7Q8IWZ6 715 aa14.68□□□□□ -0.06
RNF4-208ENST00000507247 ZNF683Q8IZ20 524 aa14.68□□□□□ -0.06
RNF4-208ENST00000507247 UBL4BQ8N7F7 174 aa14.68□□□□□ -0.06
RNF4-208ENST00000507247 FAM71BQ8TC56 605 aa14.68□□□□□ -0.06
RNF4-208ENST00000507247 AZIN2Q96A70 460 aa14.68□□□□□ -0.06
RNF4-208ENST00000507247 RNF25Q96BH1 459 aaPredicted RBP14.68□□□□□ -0.06
RNF4-208ENST00000507247 MYEOVQ96EZ4 313 aa14.68□□□□□ -0.06
RNF4-208ENST00000507247 PRMT1Q99873 361 aaKnown RBP14.68□□□□□ -0.06
RNF4-208ENST00000507247 DCLK3Q9C098 648 aa14.68□□□□□ -0.06
RNF4-208ENST00000507247 EPS15L1Q9UBC2 864 aa14.68□□□□□ -0.06
RNF4-208ENST00000507247 SLC12A6Q9UHW9 1150 aa14.68□□□□□ -0.06
RNF4-208ENST00000507247 STOML2Q9UJZ1 356 aa14.68□□□□□ -0.06
RNF4-208ENST00000507247 LSM7Q9UK45 103 aaKnown RBP14.68□□□□□ -0.06
RNF4-208ENST00000507247 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.68□□□□□ -0.06
RNF4-208ENST00000507247 ZFP37Q9Y6Q3 630 aaPredicted RBP14.68□□□□□ -0.06
RNF4-208ENST00000507247 MYOFQ9NZM1 2061 aa14.68□□□□□ -0.06
RNF4-208ENST00000507247 E2F8A0AVK6 867 aa14.67□□□□□ -0.06
RNF4-208ENST00000507247 CTAGE9A4FU28 777 aa14.67□□□□□ -0.06
RNF4-208ENST00000507247 HEPACAM2A8MVW5 462 aa14.67□□□□□ -0.06
RNF4-208ENST00000507247 C2CD4DB7Z1M9 353 aa14.67□□□□□ -0.06
RNF4-208ENST00000507247 LATS1O95835 1130 aa14.67□□□□□ -0.06
RNF4-208ENST00000507247 PYGMP11217 842 aa14.67□□□□□ -0.06
RNF4-208ENST00000507247 TACR2P21452 398 aa14.67□□□□□ -0.06
RNF4-208ENST00000507247 CASQ1P31415 396 aa14.67□□□□□ -0.06
RNF4-208ENST00000507247 CXCR5P32302 372 aa14.67□□□□□ -0.06
RNF4-208ENST00000507247 SLC11A2P49281 568 aa14.67□□□□□ -0.06
RNF4-208ENST00000507247 MLLT6P55198 1093 aaPredicted RBP14.67□□□□□ -0.06
RNF4-208ENST00000507247 AUHQ13825 339 aaKnown RBP14.67□□□□□ -0.06
RNF4-208ENST00000507247 DPYSL3Q14195 570 aa14.67□□□□□ -0.06
RNF4-208ENST00000507247 PPP6R3Q5H9R7 873 aaPredicted RBP14.67□□□□□ -0.06
RNF4-208ENST00000507247 MANEALQ5VSG8 457 aa14.67□□□□□ -0.06
RNF4-208ENST00000507247 PAPD7Q5XG87 772 aaKnown RBP14.67□□□□□ -0.06
RNF4-208ENST00000507247 RFWD3Q6PCD5 774 aa14.67□□□□□ -0.06
RNF4-208ENST00000507247 PARM1Q6UWI2 310 aa14.67□□□□□ -0.06
RNF4-208ENST00000507247 MFSD7Q6UXD7 560 aa14.67□□□□□ -0.06
RNF4-208ENST00000507247 VITQ6UXI7 678 aa14.67□□□□□ -0.06
RNF4-208ENST00000507247 OTOP3Q7RTS5 596 aa14.67□□□□□ -0.06
RNF4-208ENST00000507247 CHSY1Q86X52 802 aa14.67□□□□□ -0.06
RNF4-208ENST00000507247 FAM217AQ8IXS0 508 aa14.67□□□□□ -0.06
RNF4-208ENST00000507247 KCTD6Q8NC69 237 aa14.67□□□□□ -0.06
RNF4-208ENST00000507247 EXD1Q8NHP7 514 aa14.67□□□□□ -0.06
RNF4-208ENST00000507247 UBE2Q2Q8WVN8 375 aa14.67□□□□□ -0.06
RNF4-208ENST00000507247 TSC1Q92574 1164 aa14.67□□□□□ -0.06
RNF4-208ENST00000507247 FGF14Q92915 247 aa14.67□□□□□ -0.06
RNF4-208ENST00000507247 KXD1Q9BQD3 176 aa14.67□□□□□ -0.06
RNF4-208ENST00000507247 PLA2G2FQ9BZM2 168 aa14.67□□□□□ -0.06
RNF4-208ENST00000507247 ZFP14Q9HCL3 533 aa14.67□□□□□ -0.06
RNF4-208ENST00000507247 OBP2AQ9NY56 170 aa14.67□□□□□ -0.06
RNF4-208ENST00000507247 OR12D3Q9UGF7 316 aa14.67□□□□□ -0.06
RNF4-208ENST00000507247 SNX12Q9UMY4 172 aa14.67□□□□□ -0.06
RNF4-208ENST00000507247 NEU3Q9UQ49 428 aa14.67□□□□□ -0.06
RNF4-208ENST00000507247 TCF20Q9UGU0 1960 aaKnown RBP14.66□□□□□ -0.06
RNF4-208ENST00000507247 COL4A3Q01955 1670 aa14.66□□□□□ -0.06
RNF4-208ENST00000507247 E9PAM4 449 aa14.66□□□□□ -0.06
RNF4-208ENST00000507247 KIF2AO00139 706 aaPredicted RBP14.66□□□□□ -0.06
RNF4-208ENST00000507247 GFRA2O00451 464 aa14.66□□□□□ -0.06
RNF4-208ENST00000507247 KCNK3O14649 394 aa14.66□□□□□ -0.06
RNF4-208ENST00000507247 TRDMT1O14717 391 aaKnown RBP14.66□□□□□ -0.06
RNF4-208ENST00000507247 CREB3O43889 395 aa14.66□□□□□ -0.06
RNF4-208ENST00000507247 LRIG2O94898 1065 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms