RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 DEFB107AQ8IZN7 70 aa16.92■□□□□ 0.3
PCDHA1-203ENST00000504120 MKL1Q969V6 931 aa16.92■□□□□ 0.3
PCDHA1-203ENST00000504120 LRRC39Q96DD0 335 aa16.92■□□□□ 0.3
PCDHA1-203ENST00000504120 ELOVL4Q9GZR5 314 aa16.92■□□□□ 0.3
PCDHA1-203ENST00000504120 NMRAL1Q9HBL8 299 aa16.92■□□□□ 0.3
PCDHA1-203ENST00000504120 KCNMB3Q9NPA1 279 aa16.92■□□□□ 0.3
PCDHA1-203ENST00000504120 ENTPD7Q9NQZ7 604 aa16.92■□□□□ 0.3
PCDHA1-203ENST00000504120 TIMM13Q9Y5L4 95 aaPredicted RBP16.92■□□□□ 0.3
PCDHA1-203ENST00000504120 MROH7Q68CQ1 1323 aa16.92■□□□□ 0.3
PCDHA1-203ENST00000504120 ERI2A8K979 691 aaKnown RBP16.92■□□□□ 0.3
PCDHA1-203ENST00000504120 ACAT1P24752 427 aaKnown RBP16.92■□□□□ 0.3
PCDHA1-203ENST00000504120 SSTR1P30872 391 aa16.92■□□□□ 0.3
PCDHA1-203ENST00000504120 TUBP50607 506 aa16.92■□□□□ 0.3
PCDHA1-203ENST00000504120 MAD2L1Q13257 205 aaPredicted RBP16.92■□□□□ 0.3
PCDHA1-203ENST00000504120 MFSD10Q14728 455 aa16.92■□□□□ 0.3
PCDHA1-203ENST00000504120 DEFB106AQ8N104 65 aa16.92■□□□□ 0.3
PCDHA1-203ENST00000504120 LPCAT1Q8NF37 534 aa16.92■□□□□ 0.3
PCDHA1-203ENST00000504120 TMEM114B3SHH9 223 aa16.91■□□□□ 0.3
PCDHA1-203ENST00000504120 ANKRD63C9JTQ0 380 aa16.91■□□□□ 0.3
PCDHA1-203ENST00000504120 RASSF9O75901 435 aa16.91■□□□□ 0.3
PCDHA1-203ENST00000504120 NR6A1Q15406 480 aa16.91■□□□□ 0.3
PCDHA1-203ENST00000504120 CCDC142Q17RM4 750 aa16.91■□□□□ 0.3
PCDHA1-203ENST00000504120 ZBTB49Q6ZSB9 765 aa16.91■□□□□ 0.3
PCDHA1-203ENST00000504120 SCUBE3Q8IX30 993 aa16.91■□□□□ 0.3
PCDHA1-203ENST00000504120 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.91■□□□□ 0.3
PCDHA1-203ENST00000504120 GNG14A0A1W2PPG7 69 aa16.91■□□□□ 0.3
PCDHA1-203ENST00000504120 MAP3K13O43283 966 aa16.91■□□□□ 0.3
PCDHA1-203ENST00000504120 POMCP01189 267 aa16.91■□□□□ 0.3
PCDHA1-203ENST00000504120 HALP42357 657 aa16.91■□□□□ 0.3
PCDHA1-203ENST00000504120 SLC2A14Q8TDB8 520 aa16.91■□□□□ 0.3
PCDHA1-203ENST00000504120 FAM120BQ96EK7 910 aaKnown RBP16.91■□□□□ 0.3
PCDHA1-203ENST00000504120 KCTD14Q9BQ13 255 aaPredicted RBP16.91■□□□□ 0.3
PCDHA1-203ENST00000504120 PALMDQ9NP74 551 aa16.91■□□□□ 0.3
PCDHA1-203ENST00000504120 USE1Q9NZ43 259 aa16.91■□□□□ 0.3
PCDHA1-203ENST00000504120 SHPRHQ149N8 1683 aa16.91■□□□□ 0.3
PCDHA1-203ENST00000504120 ATP6V1B2P21281 511 aa16.91■□□□□ 0.3
PCDHA1-203ENST00000504120 WDR59Q6PJI9 974 aa16.91■□□□□ 0.3
PCDHA1-203ENST00000504120 KRT78Q8N1N4 520 aa16.91■□□□□ 0.3
PCDHA1-203ENST00000504120 OXNAD1Q96HP4 312 aaPredicted RBP16.91■□□□□ 0.3
PCDHA1-203ENST00000504120 BTBD10Q9BSF8 475 aa16.91■□□□□ 0.3
PCDHA1-203ENST00000504120 PORCNQ9H237 461 aa16.91■□□□□ 0.3
PCDHA1-203ENST00000504120 STN1Q9H668 368 aaKnown RBP16.91■□□□□ 0.3
PCDHA1-203ENST00000504120 A0A096LPK6 155 aa16.91■□□□□ 0.3
PCDHA1-203ENST00000504120 TMEM150BA6NC51 233 aa16.91■□□□□ 0.3
PCDHA1-203ENST00000504120 FCHO1O14526 889 aa16.91■□□□□ 0.3
PCDHA1-203ENST00000504120 ATP6V1G2O95670 118 aa16.91■□□□□ 0.3
PCDHA1-203ENST00000504120 ALADP13716 330 aa16.91■□□□□ 0.3
PCDHA1-203ENST00000504120 TPH1P17752 444 aa16.91■□□□□ 0.3
PCDHA1-203ENST00000504120 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.91■□□□□ 0.3
PCDHA1-203ENST00000504120 HPS4Q9NQG7 708 aa16.91■□□□□ 0.3
PCDHA1-203ENST00000504120 CAB39Q9Y376 341 aaPredicted RBP16.91■□□□□ 0.3
PCDHA1-203ENST00000504120 BAIAP3O94812 1187 aa16.9■□□□□ 0.3
PCDHA1-203ENST00000504120 RAD23AP54725 363 aa16.9■□□□□ 0.3
PCDHA1-203ENST00000504120 CDH8P55286 799 aa16.9■□□□□ 0.3
PCDHA1-203ENST00000504120 IZUMO2Q6UXV1 221 aa16.9■□□□□ 0.3
PCDHA1-203ENST00000504120 P2RX7Q99572 595 aaKnown RBP16.9■□□□□ 0.3
PCDHA1-203ENST00000504120 BBS2Q9BXC9 721 aa16.9■□□□□ 0.3
PCDHA1-203ENST00000504120 CEP41Q9BYV8 373 aa16.9■□□□□ 0.3
PCDHA1-203ENST00000504120 EPS8L2Q9H6S3 715 aa16.9■□□□□ 0.3
PCDHA1-203ENST00000504120 SNCAIPQ9Y6H5 919 aa16.9■□□□□ 0.3
PCDHA1-203ENST00000504120 CPSF4O95639 269 aaKnown RBP16.9■□□□□ 0.3
PCDHA1-203ENST00000504120 HOXB8P17481 243 aaPredicted RBP16.9■□□□□ 0.3
PCDHA1-203ENST00000504120 SCARA3Q6AZY7 606 aa16.9■□□□□ 0.3
PCDHA1-203ENST00000504120 YME1L1Q96TA2 773 aa16.9■□□□□ 0.3
PCDHA1-203ENST00000504120 WDR41Q9HAD4 459 aa16.9■□□□□ 0.3
PCDHA1-203ENST00000504120 POPDC2Q9HBU9 364 aa16.9■□□□□ 0.3
PCDHA1-203ENST00000504120 COMMD8Q9NX08 183 aa16.9■□□□□ 0.3
PCDHA1-203ENST00000504120 CACNA2D2Q9NY47 1150 aa16.9■□□□□ 0.3
PCDHA1-203ENST00000504120 STARD13Q9Y3M8 1113 aa16.9■□□□□ 0.3
PCDHA1-203ENST00000504120 NFASCO94856 1347 aa16.9■□□□□ 0.3
PCDHA1-203ENST00000504120 OR1E1P30953 314 aa16.9■□□□□ 0.3
PCDHA1-203ENST00000504120 CRYMQ14894 314 aa16.9■□□□□ 0.3
PCDHA1-203ENST00000504120 PKN2Q16513 984 aaKnown RBP16.9■□□□□ 0.3
PCDHA1-203ENST00000504120 KCNT2Q6UVM3 1135 aa16.9■□□□□ 0.3
PCDHA1-203ENST00000504120 ETNPPLQ8TBG4 499 aa16.9■□□□□ 0.3
PCDHA1-203ENST00000504120 ACOX2Q99424 681 aa16.9■□□□□ 0.3
PCDHA1-203ENST00000504120 TBL1YQ9BQ87 522 aa16.9■□□□□ 0.3
PCDHA1-203ENST00000504120 RGS18Q9NS28 235 aa16.9■□□□□ 0.3
PCDHA1-203ENST00000504120 TAS2R13Q9NYV9 303 aa16.9■□□□□ 0.3
PCDHA1-203ENST00000504120 RTN3O95197 1032 aaPredicted RBP16.9■□□□□ 0.3
PCDHA1-203ENST00000504120 IFI35P80217 286 aaPredicted RBP16.9■□□□□ 0.3
PCDHA1-203ENST00000504120 PPATQ06203 517 aa16.9■□□□□ 0.3
PCDHA1-203ENST00000504120 DPYSL3Q14195 570 aa16.9■□□□□ 0.3
PCDHA1-203ENST00000504120 FBXO39Q8N4B4 442 aa16.9■□□□□ 0.3
PCDHA1-203ENST00000504120 EPS8L1Q8TE68 723 aa16.9■□□□□ 0.3
PCDHA1-203ENST00000504120 AKT1S1Q96B36 256 aa16.9■□□□□ 0.3
PCDHA1-203ENST00000504120 ZBTB45Q96K62 511 aaPredicted RBP16.9■□□□□ 0.3
PCDHA1-203ENST00000504120 DPP7Q9UHL4 492 aa16.9■□□□□ 0.3
PCDHA1-203ENST00000504120 IPPQ9Y573 584 aa16.9■□□□□ 0.3
PCDHA1-203ENST00000504120 COPG1Q9Y678 874 aaKnown RBP16.9■□□□□ 0.3
PCDHA1-203ENST00000504120 AK9Q5TCS8 1911 aa16.9■□□□□ 0.3
PCDHA1-203ENST00000504120 IFT172Q9UG01 1749 aa16.9■□□□□ 0.3
PCDHA1-203ENST00000504120 ZNF682O95780 498 aa16.9■□□□□ 0.3
PCDHA1-203ENST00000504120 ZNF7P17097 686 aaPredicted RBP16.9■□□□□ 0.3
PCDHA1-203ENST00000504120 PRKCQQ04759 706 aa16.9■□□□□ 0.3
PCDHA1-203ENST00000504120 TMEM86AQ8N2M4 240 aa16.9■□□□□ 0.3
PCDHA1-203ENST00000504120 DDHD1Q8NEL9 900 aa16.9■□□□□ 0.3
PCDHA1-203ENST00000504120 TRAPPC12Q8WVT3 735 aa16.9■□□□□ 0.3
PCDHA1-203ENST00000504120 CATSPER2Q96P56 530 aa16.9■□□□□ 0.3
PCDHA1-203ENST00000504120 PARVBQ9HBI1 364 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms