RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 ZNF394Q53GI3 561 aa14.56□□□□□ -0.08
CCDC58-207ENST00000498466 PRAMEF14Q5SWL7 426 aa14.56□□□□□ -0.08
CCDC58-207ENST00000498466 CEP135Q66GS9 1140 aa14.56□□□□□ -0.08
CCDC58-207ENST00000498466 SLC9A9Q8IVB4 645 aa14.56□□□□□ -0.08
CCDC58-207ENST00000498466 FAM217AQ8IXS0 508 aa14.56□□□□□ -0.08
CCDC58-207ENST00000498466 TMC2Q8TDI7 906 aa14.56□□□□□ -0.08
CCDC58-207ENST00000498466 GANCQ8TET4 914 aa14.56□□□□□ -0.08
CCDC58-207ENST00000498466 CNDP2Q96KP4 475 aaKnown RBP14.56□□□□□ -0.08
CCDC58-207ENST00000498466 FCRL3Q96P31 734 aaPredicted RBP14.56□□□□□ -0.08
CCDC58-207ENST00000498466 BACH2Q9BYV9 841 aa14.56□□□□□ -0.08
CCDC58-207ENST00000498466 PRORYQ9H606 182 aa14.56□□□□□ -0.08
CCDC58-207ENST00000498466 APOBEC3GQ9HC16 384 aaKnown RBP14.56□□□□□ -0.08
CCDC58-207ENST00000498466 PRSS16Q9NQE7 514 aa14.56□□□□□ -0.08
CCDC58-207ENST00000498466 ABCB8Q9NUT2 735 aa14.56□□□□□ -0.08
CCDC58-207ENST00000498466 NCKAP1Q9Y2A7 1128 aa14.56□□□□□ -0.08
CCDC58-207ENST00000498466 CKAP5Q14008 2032 aa14.56□□□□□ -0.08
CCDC58-207ENST00000498466 CBX4O00257 560 aa14.55□□□□□ -0.08
CCDC58-207ENST00000498466 VILLO15195 856 aa14.55□□□□□ -0.08
CCDC58-207ENST00000498466 TLX3O43711 291 aaPredicted RBP14.55□□□□□ -0.08
CCDC58-207ENST00000498466 CUTAO60888 179 aa14.55□□□□□ -0.08
CCDC58-207ENST00000498466 RFPL3O75679 317 aa14.55□□□□□ -0.08
CCDC58-207ENST00000498466 NR3C1P04150 777 aa14.55□□□□□ -0.08
CCDC58-207ENST00000498466 ITGAVP06756 1048 aa14.55□□□□□ -0.08
CCDC58-207ENST00000498466 ABCB4P21439 1286 aa14.55□□□□□ -0.08
CCDC58-207ENST00000498466 RACK1P63244 317 aaKnown RBP14.55□□□□□ -0.08
CCDC58-207ENST00000498466 TARDBPQ13148 414 aaKnown RBP eCLIP14.55□□□□□ -0.08
CCDC58-207ENST00000498466 DNAJC3Q13217 504 aa14.55□□□□□ -0.08
CCDC58-207ENST00000498466 ZNF776Q68DI1 518 aaPredicted RBP14.55□□□□□ -0.08
CCDC58-207ENST00000498466 KIAA0895LQ68EN5 471 aa14.55□□□□□ -0.08
CCDC58-207ENST00000498466 AHI1Q8N157 1196 aa14.55□□□□□ -0.08
CCDC58-207ENST00000498466 GOLGA1Q92805 767 aa14.55□□□□□ -0.08
CCDC58-207ENST00000498466 SKA1Q96BD8 255 aa14.55□□□□□ -0.08
CCDC58-207ENST00000498466 HEXIM2Q96MH2 286 aaKnown RBP14.55□□□□□ -0.08
CCDC58-207ENST00000498466 SLC6A18Q96N87 628 aa14.55□□□□□ -0.08
CCDC58-207ENST00000498466 ELF4Q99607 663 aaPredicted RBP14.55□□□□□ -0.08
CCDC58-207ENST00000498466 ORAI3Q9BRQ5 295 aa14.55□□□□□ -0.08
CCDC58-207ENST00000498466 NIF3L1Q9GZT8 377 aa14.55□□□□□ -0.08
CCDC58-207ENST00000498466 GGA2Q9UJY4 613 aa14.55□□□□□ -0.08
CCDC58-207ENST00000498466 FRMD4BQ9Y2L6 1034 aa14.55□□□□□ -0.08
CCDC58-207ENST00000498466 RAI2Q9Y5P3 530 aa14.55□□□□□ -0.08
CCDC58-207ENST00000498466 IGHV4-34P06331 123 aa14.54□□□□□ -0.08
CCDC58-207ENST00000498466 ATP5BP06576 529 aaKnown RBP14.54□□□□□ -0.08
CCDC58-207ENST00000498466 DLDP09622 509 aaKnown RBP14.54□□□□□ -0.08
CCDC58-207ENST00000498466 C7P10643 843 aa14.54□□□□□ -0.08
CCDC58-207ENST00000498466 CDK4P11802 303 aa14.54□□□□□ -0.08
CCDC58-207ENST00000498466 PABPC1P11940 636 aaKnown RBP14.54□□□□□ -0.08
CCDC58-207ENST00000498466 ZNF445P59923 1031 aa14.54□□□□□ -0.08
CCDC58-207ENST00000498466 PDE4CQ08493 712 aa14.54□□□□□ -0.08
CCDC58-207ENST00000498466 STK4Q13043 487 aa14.54□□□□□ -0.08
CCDC58-207ENST00000498466 TRIP4Q15650 581 aaPredicted RBP14.54□□□□□ -0.08
CCDC58-207ENST00000498466 C1orf220Q5T0J3 134 aa14.54□□□□□ -0.08
CCDC58-207ENST00000498466 MBLAC2Q68D91 279 aa14.54□□□□□ -0.08
CCDC58-207ENST00000498466 ZNF605Q86T29 641 aa14.54□□□□□ -0.08
CCDC58-207ENST00000498466 ADIPOR2Q86V24 386 aa14.54□□□□□ -0.08
CCDC58-207ENST00000498466 PIGZQ86VD9 579 aa14.54□□□□□ -0.08
CCDC58-207ENST00000498466 FMNL3Q8IVF7 1028 aa14.54□□□□□ -0.08
CCDC58-207ENST00000498466 GRAMD1CQ8IYS0 662 aa14.54□□□□□ -0.08
CCDC58-207ENST00000498466 CCDC150Q8NCX0 1101 aa14.54□□□□□ -0.08
CCDC58-207ENST00000498466 TAS1R2Q8TE23 839 aa14.54□□□□□ -0.08
CCDC58-207ENST00000498466 TMEM174Q8WUU8 243 aa14.54□□□□□ -0.08
CCDC58-207ENST00000498466 BAP1Q92560 729 aa14.54□□□□□ -0.08
CCDC58-207ENST00000498466 TMA16Q96EY4 203 aaKnown RBP14.54□□□□□ -0.08
CCDC58-207ENST00000498466 ZNF396Q96N95 335 aaPredicted RBP14.54□□□□□ -0.08
CCDC58-207ENST00000498466 EXOC1Q9NV70 894 aa14.54□□□□□ -0.08
CCDC58-207ENST00000498466 SUN2Q9UH99 717 aa14.54□□□□□ -0.08
CCDC58-207ENST00000498466 TMEM131Q92545 1883 aa14.54□□□□□ -0.08
CCDC58-207ENST00000498466 GOLGA4Q13439 2230 aaKnown RBP14.54□□□□□ -0.08
CCDC58-207ENST00000498466 ASXL3Q9C0F0 2248 aa14.54□□□□□ -0.08
CCDC58-207ENST00000498466 A0A1W2PPC4 97 aa14.53□□□□□ -0.08
CCDC58-207ENST00000498466 PDXKO00764 312 aa14.53□□□□□ -0.08
CCDC58-207ENST00000498466 CAPN9O14815 690 aa14.53□□□□□ -0.08
CCDC58-207ENST00000498466 YEATS4O95619 227 aa14.53□□□□□ -0.08
CCDC58-207ENST00000498466 C1SP09871 688 aa14.53□□□□□ -0.08
CCDC58-207ENST00000498466 PLA2G2AP14555 144 aa14.53□□□□□ -0.08
CCDC58-207ENST00000498466 GCLMP48507 274 aa14.53□□□□□ -0.08
CCDC58-207ENST00000498466 VAMP7P51809 220 aa14.53□□□□□ -0.08
CCDC58-207ENST00000498466 TKTL1P51854 596 aa14.53□□□□□ -0.08
CCDC58-207ENST00000498466 SLC8A3P57103 927 aa14.53□□□□□ -0.08
CCDC58-207ENST00000498466 HES3Q5TGS1 186 aa14.53□□□□□ -0.08
CCDC58-207ENST00000498466 EID2Q8N6I1 236 aa14.53□□□□□ -0.08
CCDC58-207ENST00000498466 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.53□□□□□ -0.08
CCDC58-207ENST00000498466 KIAA0895Q8NCT3 520 aa14.53□□□□□ -0.08
CCDC58-207ENST00000498466 LSM14AQ8ND56 463 aaKnown RBP14.53□□□□□ -0.08
CCDC58-207ENST00000498466 UBXN6Q9BZV1 441 aa14.53□□□□□ -0.08
CCDC58-207ENST00000498466 KCTD10Q9H3F6 313 aa14.53□□□□□ -0.08
CCDC58-207ENST00000498466 MMRN2Q9H8L6 949 aa14.53□□□□□ -0.08
CCDC58-207ENST00000498466 AASDHPPTQ9NRN7 309 aa14.53□□□□□ -0.08
CCDC58-207ENST00000498466 OLA1Q9NTK5 396 aaKnown RBP14.53□□□□□ -0.08
CCDC58-207ENST00000498466 FBXL12Q9NXK8 326 aa14.53□□□□□ -0.08
CCDC58-207ENST00000498466 FAM13BQ9NYF5 915 aa14.53□□□□□ -0.08
CCDC58-207ENST00000498466 ZBED1O96006 694 aa14.52□□□□□ -0.09
CCDC58-207ENST00000498466 TRIM49P0CI25 452 aa14.52□□□□□ -0.09
CCDC58-207ENST00000498466 TRIM49CP0CI26 452 aa14.52□□□□□ -0.09
CCDC58-207ENST00000498466 POLR2EP19388 210 aaKnown RBP14.52□□□□□ -0.09
CCDC58-207ENST00000498466 ACADVLP49748 655 aa14.52□□□□□ -0.09
CCDC58-207ENST00000498466 NUMA1Q14980 2115 aa14.52□□□□□ -0.09
CCDC58-207ENST00000498466 RAB41Q5JT25 222 aa14.52□□□□□ -0.09
CCDC58-207ENST00000498466 ADGRF1Q5T601 910 aa14.52□□□□□ -0.09
CCDC58-207ENST00000498466 NCEH1Q6PIU2 408 aa14.52□□□□□ -0.09
CCDC58-207ENST00000498466 USP30Q70CQ3 517 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms