RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 CDCP1Q9H5V8 836 aa3.29□□□□□ -1.88
RIF1-212ENST00000498041 KCNK9Q9NPC2 374 aa3.29□□□□□ -1.88
RIF1-212ENST00000498041 OBP2BQ9NPH6 170 aa3.29□□□□□ -1.88
RIF1-212ENST00000498041 ASNSD1Q9NWL6 643 aa3.29□□□□□ -1.88
RIF1-212ENST00000498041 NFU1Q9UMS0 254 aa3.29□□□□□ -1.88
RIF1-212ENST00000498041 BTBD3Q9Y2F9 522 aa3.29□□□□□ -1.88
RIF1-212ENST00000498041 PCF11O94913 1555 aaKnown RBP3.29□□□□□ -1.88
RIF1-212ENST00000498041 ADAMTS12P58397 1594 aa3.29□□□□□ -1.88
RIF1-212ENST00000498041 CDK13Q14004 1512 aaKnown RBP3.29□□□□□ -1.88
RIF1-212ENST00000498041 PTPRKQ15262 1439 aa3.28□□□□□ -1.88
RIF1-212ENST00000498041 C16orf96A6NNT2 1141 aa3.28□□□□□ -1.88
RIF1-212ENST00000498041 LGALS16A8MUM7 142 aa3.28□□□□□ -1.88
RIF1-212ENST00000498041 E5RJQ4 531 aa3.28□□□□□ -1.88
RIF1-212ENST00000498041 PRYO14603 147 aa3.28□□□□□ -1.88
RIF1-212ENST00000498041 TP73O15350 636 aa3.28□□□□□ -1.88
RIF1-212ENST00000498041 INPPL1O15357 1258 aa3.28□□□□□ -1.88
RIF1-212ENST00000498041 DNPH1O43598 174 aa3.28□□□□□ -1.88
RIF1-212ENST00000498041 ASNA1O43681 348 aa3.28□□□□□ -1.88
RIF1-212ENST00000498041 USP12O75317 370 aa3.28□□□□□ -1.88
RIF1-212ENST00000498041 CER1O95813 267 aa3.28□□□□□ -1.88
RIF1-212ENST00000498041 CD63P08962 238 aa3.28□□□□□ -1.88
RIF1-212ENST00000498041 SFPQP23246 707 aaKnown RBP eCLIP3.28□□□□□ -1.88
RIF1-212ENST00000498041 KLRK1P26718 216 aa3.28□□□□□ -1.88
RIF1-212ENST00000498041 NDUFS1P28331 727 aa3.28□□□□□ -1.88
RIF1-212ENST00000498041 SLC8A1P32418 973 aa3.28□□□□□ -1.88
RIF1-212ENST00000498041 MMP13P45452 471 aa3.28□□□□□ -1.88
RIF1-212ENST00000498041 AGTR2P50052 363 aa3.28□□□□□ -1.88
RIF1-212ENST00000498041 YPEL5P62699 121 aa3.28□□□□□ -1.88
RIF1-212ENST00000498041 ICA1Q05084 483 aa3.28□□□□□ -1.88
RIF1-212ENST00000498041 OS9Q13438 667 aaPredicted RBP3.28□□□□□ -1.88
RIF1-212ENST00000498041 GAB1Q13480 694 aa3.28□□□□□ -1.88
RIF1-212ENST00000498041 PUM3Q15397 648 aaKnown RBP3.28□□□□□ -1.88
RIF1-212ENST00000498041 TRIP6Q15654 476 aaKnown RBP3.28□□□□□ -1.88
RIF1-212ENST00000498041 PFKFB4Q16877 469 aa3.28□□□□□ -1.88
RIF1-212ENST00000498041 ZACNQ401N2 412 aa3.28□□□□□ -1.88
RIF1-212ENST00000498041 GLE1Q53GS7 698 aaKnown RBP3.28□□□□□ -1.88
RIF1-212ENST00000498041 PAPD7Q5XG87 772 aaKnown RBP3.28□□□□□ -1.88
RIF1-212ENST00000498041 C16orf89Q6UX73 402 aa3.28□□□□□ -1.88
RIF1-212ENST00000498041 KYAT3Q6YP21 454 aaKnown RBP3.28□□□□□ -1.88
RIF1-212ENST00000498041 UBE2Q1Q7Z7E8 422 aa3.28□□□□□ -1.88
RIF1-212ENST00000498041 TRABD2AQ86V40 505 aa3.28□□□□□ -1.88
RIF1-212ENST00000498041 UEVLDQ8IX04 471 aa3.28□□□□□ -1.88
RIF1-212ENST00000498041 LAS2Q8IYD9 372 aa3.28□□□□□ -1.88
RIF1-212ENST00000498041 PRSS3P2Q8NHM4 247 aa3.28□□□□□ -1.88
RIF1-212ENST00000498041 DENND1AQ8TEH3 1009 aa3.28□□□□□ -1.88
RIF1-212ENST00000498041 STYXQ8WUJ0 223 aa3.28□□□□□ -1.88
RIF1-212ENST00000498041 NPIPB3Q92617 1050 aa3.28□□□□□ -1.88
RIF1-212ENST00000498041 RSC1A1Q92681 617 aa3.28□□□□□ -1.88
RIF1-212ENST00000498041 CELF1Q92879 486 aaKnown RBP3.28□□□□□ -1.88
RIF1-212ENST00000498041 CUL5Q93034 780 aa3.28□□□□□ -1.88
RIF1-212ENST00000498041 RPL36ALQ969Q0 106 aaKnown RBP3.28□□□□□ -1.88
RIF1-212ENST00000498041 EID2BQ96D98 161 aa3.28□□□□□ -1.88
RIF1-212ENST00000498041 ZNF845Q96IR2 970 aaPredicted RBP3.28□□□□□ -1.88
RIF1-212ENST00000498041 SIN3AQ96ST3 1273 aa3.28□□□□□ -1.88
RIF1-212ENST00000498041 ELOVL1Q9BW60 279 aa3.28□□□□□ -1.88
RIF1-212ENST00000498041 RNF7Q9UBF6 113 aa3.28□□□□□ -1.88
RIF1-212ENST00000498041 ZNF70Q9UC06 446 aaPredicted RBP3.28□□□□□ -1.88
RIF1-212ENST00000498041 TAGLN3Q9UI15 199 aa3.28□□□□□ -1.88
RIF1-212ENST00000498041 PCDHB7Q9Y5E2 793 aa3.28□□□□□ -1.88
RIF1-212ENST00000498041 KDM6BO15054 1643 aa3.28□□□□□ -1.88
RIF1-212ENST00000498041 SPATA31A5Q5VU36 1347 aa3.27□□□□□ -1.89
RIF1-212ENST00000498041 SPATA31A7Q8IWB4 1347 aa3.27□□□□□ -1.89
RIF1-212ENST00000498041 LOC105369274A0A096LPK9 316 aa3.27□□□□□ -1.89
RIF1-212ENST00000498041 LOC102723532A0A0G2JNH3 316 aa3.27□□□□□ -1.89
RIF1-212ENST00000498041 F5H423 210 aaPredicted RBP3.27□□□□□ -1.89
RIF1-212ENST00000498041 SYT5O00445 386 aa3.27□□□□□ -1.89
RIF1-212ENST00000498041 RRHO14718 337 aa3.27□□□□□ -1.89
RIF1-212ENST00000498041 NKX2-8O15522 239 aa3.27□□□□□ -1.89
RIF1-212ENST00000498041 RPP40O75818 363 aaKnown RBP3.27□□□□□ -1.89
RIF1-212ENST00000498041 PLAUP00749 431 aa3.27□□□□□ -1.89
RIF1-212ENST00000498041 ENO1P06733 434 aaKnown RBP3.27□□□□□ -1.89
RIF1-212ENST00000498041 PDIA3P30101 505 aaKnown RBP3.27□□□□□ -1.89
RIF1-212ENST00000498041 AKT1P31749 480 aa3.27□□□□□ -1.89
RIF1-212ENST00000498041 THBS4P35443 961 aa3.27□□□□□ -1.89
RIF1-212ENST00000498041 IDUAP35475 653 aa3.27□□□□□ -1.89
RIF1-212ENST00000498041 STAT6P42226 847 aa3.27□□□□□ -1.89
RIF1-212ENST00000498041 ZNF81P51508 661 aa3.27□□□□□ -1.89
RIF1-212ENST00000498041 ZNF84P51523 738 aa3.27□□□□□ -1.89
RIF1-212ENST00000498041 POLE2P56282 527 aa3.27□□□□□ -1.89
RIF1-212ENST00000498041 RPS13P62277 151 aaKnown RBP3.27□□□□□ -1.89
RIF1-212ENST00000498041 CFHR1Q03591 330 aa3.27□□□□□ -1.89
RIF1-212ENST00000498041 CHAF1AQ13111 956 aaPredicted RBP3.27□□□□□ -1.89
RIF1-212ENST00000498041 STIM1Q13586 685 aa3.27□□□□□ -1.89
RIF1-212ENST00000498041 AAK1Q2M2I8 961 aa3.27□□□□□ -1.89
RIF1-212ENST00000498041 ZNF569Q5MCW4 686 aa3.27□□□□□ -1.89
RIF1-212ENST00000498041 WDR93Q6P2C0 686 aa3.27□□□□□ -1.89
RIF1-212ENST00000498041 TFAP2DQ7Z6R9 452 aa3.27□□□□□ -1.89
RIF1-212ENST00000498041 OR4N4Q8N0Y3 316 aa3.27□□□□□ -1.89
RIF1-212ENST00000498041 SRFBP1Q8NEF9 429 aaKnown RBP3.27□□□□□ -1.89
RIF1-212ENST00000498041 BCAS4Q8TDM0 211 aa3.27□□□□□ -1.89
RIF1-212ENST00000498041 ASB12Q8WXK4 309 aa3.27□□□□□ -1.89
RIF1-212ENST00000498041 PIGKQ92643 395 aa3.27□□□□□ -1.89
RIF1-212ENST00000498041 REXO5Q96IC2 774 aaKnown RBP3.27□□□□□ -1.89
RIF1-212ENST00000498041 FCRL5Q96RD9 977 aa3.27□□□□□ -1.89
RIF1-212ENST00000498041 SIGLEC11Q96RL6 698 aa3.27□□□□□ -1.89
RIF1-212ENST00000498041 TM2D2Q9BX73 214 aa3.27□□□□□ -1.89
RIF1-212ENST00000498041 C1QTNF7Q9BXJ2 289 aa3.27□□□□□ -1.89
RIF1-212ENST00000498041 TRIM2Q9C040 744 aa3.27□□□□□ -1.89
RIF1-212ENST00000498041 AGO4Q9HCK5 861 aaKnown RBP3.27□□□□□ -1.89
RIF1-212ENST00000498041 TUBA8Q9NY65 449 aaPredicted RBP3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms