RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 MLH1P40692 756 aa11.94□□□□□ -0.5
SNRNP200-208ENST00000497539 CAP1Q01518 475 aa11.94□□□□□ -0.5
SNRNP200-208ENST00000497539 LPIN1Q14693 890 aa11.94□□□□□ -0.5
SNRNP200-208ENST00000497539 STAT4Q14765 748 aa11.94□□□□□ -0.5
SNRNP200-208ENST00000497539 RAB41Q5JT25 222 aa11.94□□□□□ -0.5
SNRNP200-208ENST00000497539 C4orf22Q6V702 233 aa11.94□□□□□ -0.5
SNRNP200-208ENST00000497539 SCUBE3Q8IX30 993 aa11.94□□□□□ -0.5
SNRNP200-208ENST00000497539 C4orf33Q8N1A6 199 aa11.94□□□□□ -0.5
SNRNP200-208ENST00000497539 HSPH1Q92598 858 aa11.94□□□□□ -0.5
SNRNP200-208ENST00000497539 SENP8Q96LD8 212 aa11.94□□□□□ -0.5
SNRNP200-208ENST00000497539 ZFP42Q96MM3 310 aa11.94□□□□□ -0.5
SNRNP200-208ENST00000497539 SNRNP25Q9BV90 132 aaKnown RBP11.94□□□□□ -0.5
SNRNP200-208ENST00000497539 OSBPL1AQ9BXW6 950 aa11.94□□□□□ -0.5
SNRNP200-208ENST00000497539 AGO3Q9H9G7 860 aaKnown RBP11.94□□□□□ -0.5
SNRNP200-208ENST00000497539 FETUBQ9UGM5 382 aa11.94□□□□□ -0.5
SNRNP200-208ENST00000497539 SRRDQ9UH36 339 aa11.94□□□□□ -0.5
SNRNP200-208ENST00000497539 CDH9Q9ULB4 789 aa11.94□□□□□ -0.5
SNRNP200-208ENST00000497539 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.94□□□□□ -0.5
SNRNP200-208ENST00000497539 BCLAF3A2AJT9 711 aaKnown RBP11.94□□□□□ -0.5
SNRNP200-208ENST00000497539 MOXD2PA6NHM9 499 aa11.94□□□□□ -0.5
SNRNP200-208ENST00000497539 C9IYK1 514 aa11.94□□□□□ -0.5
SNRNP200-208ENST00000497539 MCF2LO15068 1137 aa11.94□□□□□ -0.5
SNRNP200-208ENST00000497539 ALOX15BO15296 676 aa11.94□□□□□ -0.5
SNRNP200-208ENST00000497539 ENTPD5O75356 428 aa11.94□□□□□ -0.5
SNRNP200-208ENST00000497539 LUC7L3O95232 432 aaKnown RBP11.94□□□□□ -0.5
SNRNP200-208ENST00000497539 CCNB1P14635 433 aa11.94□□□□□ -0.5
SNRNP200-208ENST00000497539 ADORA2BP29275 332 aa11.94□□□□□ -0.5
SNRNP200-208ENST00000497539 EPHB2P29323 1055 aa11.94□□□□□ -0.5
SNRNP200-208ENST00000497539 ATP5DP30049 168 aa11.94□□□□□ -0.5
SNRNP200-208ENST00000497539 MATKP42679 507 aa11.94□□□□□ -0.5
SNRNP200-208ENST00000497539 MAGEA6P43360 314 aa11.94□□□□□ -0.5
SNRNP200-208ENST00000497539 CTCFP49711 727 aaPredicted RBP11.94□□□□□ -0.5
SNRNP200-208ENST00000497539 CDH6P55285 790 aa11.94□□□□□ -0.5
SNRNP200-208ENST00000497539 GPS1Q13098 491 aa11.94□□□□□ -0.5
SNRNP200-208ENST00000497539 UPP1Q16831 310 aa11.94□□□□□ -0.5
SNRNP200-208ENST00000497539 ARHGEF18Q6ZSZ5 1173 aa11.94□□□□□ -0.5
SNRNP200-208ENST00000497539 NANOGNBQ7Z5D8 188 aa11.94□□□□□ -0.5
SNRNP200-208ENST00000497539 ZNF598Q86UK7 904 aaKnown RBP11.94□□□□□ -0.5
SNRNP200-208ENST00000497539 TDRPQ86YL5 185 aa11.94□□□□□ -0.5
SNRNP200-208ENST00000497539 PPIL6Q8IXY8 311 aa11.94□□□□□ -0.5
SNRNP200-208ENST00000497539 PQLC3Q8N755 202 aa11.94□□□□□ -0.5
SNRNP200-208ENST00000497539 NAT8LQ8N9F0 302 aa11.94□□□□□ -0.5
SNRNP200-208ENST00000497539 FBF1Q8TES7 1133 aa11.94□□□□□ -0.5
SNRNP200-208ENST00000497539 USP33Q8TEY7 942 aa11.94□□□□□ -0.5
SNRNP200-208ENST00000497539 PGBD4Q96DM1 585 aa11.94□□□□□ -0.5
SNRNP200-208ENST00000497539 SLC7A5P2Q9GIP4 190 aa11.94□□□□□ -0.5
SNRNP200-208ENST00000497539 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.94□□□□□ -0.5
SNRNP200-208ENST00000497539 GRID1Q9ULK0 1009 aa11.94□□□□□ -0.5
SNRNP200-208ENST00000497539 PADI3Q9ULW8 664 aa11.94□□□□□ -0.5
SNRNP200-208ENST00000497539 SF3B1O75533 1304 aaKnown RBP eCLIP11.94□□□□□ -0.52e-8■■■■■ 40.2
SNRNP200-208ENST00000497539 PTPRDP23468 1912 aa11.94□□□□□ -0.5
SNRNP200-208ENST00000497539 PDGFRBP09619 1106 aa11.94□□□□□ -0.5
SNRNP200-208ENST00000497539 ALDH3A1P30838 453 aa11.94□□□□□ -0.5
SNRNP200-208ENST00000497539 HOXD12P35452 270 aa11.94□□□□□ -0.5
SNRNP200-208ENST00000497539 TUBP50607 506 aa11.94□□□□□ -0.5
SNRNP200-208ENST00000497539 AIF1P55008 147 aa11.94□□□□□ -0.5
SNRNP200-208ENST00000497539 EIF3EP60228 445 aaKnown RBP11.94□□□□□ -0.5
SNRNP200-208ENST00000497539 SLC25A52Q3SY17 297 aa11.94□□□□□ -0.5
SNRNP200-208ENST00000497539 WSCD1Q658N2 575 aa11.94□□□□□ -0.5
SNRNP200-208ENST00000497539 RNF43Q68DV7 783 aa11.94□□□□□ -0.5
SNRNP200-208ENST00000497539 THOC7Q6I9Y2 204 aaKnown RBP11.94□□□□□ -0.5
SNRNP200-208ENST00000497539 PIGZQ86VD9 579 aa11.94□□□□□ -0.5
SNRNP200-208ENST00000497539 LONP2Q86WA8 852 aa11.94□□□□□ -0.5
SNRNP200-208ENST00000497539 TEX9Q8N6V9 391 aa11.94□□□□□ -0.5
SNRNP200-208ENST00000497539 GAD1Q99259 594 aa11.94□□□□□ -0.5
SNRNP200-208ENST00000497539 LPIN3Q9BQK8 851 aa11.94□□□□□ -0.5
SNRNP200-208ENST00000497539 TMEM121Q9BTD3 319 aa11.94□□□□□ -0.5
SNRNP200-208ENST00000497539 NRDE2Q9H7Z3 1164 aa11.94□□□□□ -0.5
SNRNP200-208ENST00000497539 MIOSQ9NXC5 875 aa11.94□□□□□ -0.5
SNRNP200-208ENST00000497539 RNF186Q9NXI6 227 aa11.94□□□□□ -0.5
SNRNP200-208ENST00000497539 CIDEBQ9UHD4 219 aa11.94□□□□□ -0.5
SNRNP200-208ENST00000497539 PHTF1Q9UMS5 762 aa11.94□□□□□ -0.5
SNRNP200-208ENST00000497539 ACTL7BQ9Y614 415 aa11.94□□□□□ -0.5
SNRNP200-208ENST00000497539 NLRC5Q86WI3 1866 aa11.93□□□□□ -0.5
SNRNP200-208ENST00000497539 DPPA5A6NC42 116 aa11.93□□□□□ -0.5
SNRNP200-208ENST00000497539 M0QZQ0 153 aa11.93□□□□□ -0.5
SNRNP200-208ENST00000497539 SGK1O00141 431 aa11.93□□□□□ -0.5
SNRNP200-208ENST00000497539 MAP3K13O43283 966 aa11.93□□□□□ -0.5
SNRNP200-208ENST00000497539 TMCC1O94876 653 aa11.93□□□□□ -0.5
SNRNP200-208ENST00000497539 MAGEA4P43358 317 aa11.93□□□□□ -0.5
SNRNP200-208ENST00000497539 CCT8P50990 548 aa11.93□□□□□ -0.5
SNRNP200-208ENST00000497539 MRPS5P82675 430 aaKnown RBP11.93□□□□□ -0.5
SNRNP200-208ENST00000497539 ROR1Q01973 937 aa11.93□□□□□ -0.5
SNRNP200-208ENST00000497539 KRT81Q14533 505 aa11.93□□□□□ -0.5
SNRNP200-208ENST00000497539 RAB6CQ53S08 254 aa11.93□□□□□ -0.5
SNRNP200-208ENST00000497539 OTUD1Q5VV17 481 aaPredicted RBP11.93□□□□□ -0.5
SNRNP200-208ENST00000497539 KIAA0319Q5VV43 1072 aa11.93□□□□□ -0.5
SNRNP200-208ENST00000497539 TRAF7Q6Q0C0 670 aa11.93□□□□□ -0.5
SNRNP200-208ENST00000497539 CLEC20AQ6ZU45 233 aa11.93□□□□□ -0.5
SNRNP200-208ENST00000497539 PLD5Q8N7P1 536 aa11.93□□□□□ -0.5
SNRNP200-208ENST00000497539 FAM13CQ8NE31 585 aa11.93□□□□□ -0.5
SNRNP200-208ENST00000497539 NUDCD1Q96RS6 583 aa11.93□□□□□ -0.5
SNRNP200-208ENST00000497539 PKMYT1Q99640 499 aa11.93□□□□□ -0.5
SNRNP200-208ENST00000497539 B3GNT5Q9BYG0 378 aa11.93□□□□□ -0.5
SNRNP200-208ENST00000497539 FRMD8Q9BZ67 464 aaPredicted RBP11.93□□□□□ -0.5
SNRNP200-208ENST00000497539 RAB6CQ9H0N0 254 aa11.93□□□□□ -0.5
SNRNP200-208ENST00000497539 CSNK1G1Q9HCP0 422 aa11.93□□□□□ -0.5
SNRNP200-208ENST00000497539 CRTAC1Q9NQ79 661 aa11.93□□□□□ -0.5
SNRNP200-208ENST00000497539 DSEQ9UL01 958 aa11.93□□□□□ -0.5
SNRNP200-208ENST00000497539 TTLL3Q9Y4R7 772 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms