RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 ALDH1A3P47895 512 aa7.2□□□□□ -1.26
VIM-207ENST00000495528 NDUFV1P49821 464 aa7.2□□□□□ -1.26
VIM-207ENST00000495528 RAP2BP61225 183 aa7.2□□□□□ -1.26
VIM-207ENST00000495528 SPATS1Q496A3 300 aa7.2□□□□□ -1.26
VIM-207ENST00000495528 XRRA1Q6P2D8 792 aa7.2□□□□□ -1.26
VIM-207ENST00000495528 Q6ZRM9 215 aa7.2□□□□□ -1.26
VIM-207ENST00000495528 TSHZ1Q6ZSZ6 1077 aa7.2□□□□□ -1.26
VIM-207ENST00000495528 ZNF572Q7Z3I7 529 aaPredicted RBP7.2□□□□□ -1.26
VIM-207ENST00000495528 RBM23Q86U06 439 aaKnown RBP7.2□□□□□ -1.26
VIM-207ENST00000495528 TPH2Q8IWU9 490 aa7.2□□□□□ -1.26
VIM-207ENST00000495528 RNF169Q8NCN4 708 aa7.2□□□□□ -1.26
VIM-207ENST00000495528 PRSS33Q8NF86 280 aa7.2□□□□□ -1.26
VIM-207ENST00000495528 MDGA1Q8NFP4 955 aa7.2□□□□□ -1.26
VIM-207ENST00000495528 POF1BQ8WVV4 589 aa7.2□□□□□ -1.26
VIM-207ENST00000495528 GLG1Q92896 1179 aa7.2□□□□□ -1.26
VIM-207ENST00000495528 DVL3Q92997 716 aaPredicted RBP7.2□□□□□ -1.26
VIM-207ENST00000495528 CUL5Q93034 780 aa7.2□□□□□ -1.26
VIM-207ENST00000495528 P2RX5Q93086 422 aa7.2□□□□□ -1.26
VIM-207ENST00000495528 BORCS6Q96GS4 357 aa7.2□□□□□ -1.26
VIM-207ENST00000495528 TMX3Q96JJ7 454 aa7.2□□□□□ -1.26
VIM-207ENST00000495528 LRGUKQ96M69 825 aa7.2□□□□□ -1.26
VIM-207ENST00000495528 PCYT2Q99447 389 aa7.2□□□□□ -1.26
VIM-207ENST00000495528 CPEB1Q9BZB8 566 aaKnown RBP7.2□□□□□ -1.26
VIM-207ENST00000495528 FAM49AQ9H0Q0 323 aaPredicted RBP7.2□□□□□ -1.26
VIM-207ENST00000495528 ERAP1Q9NZ08 941 aa7.2□□□□□ -1.26
VIM-207ENST00000495528 TCEAL9Q9UHQ7 104 aa7.2□□□□□ -1.26
VIM-207ENST00000495528 TUBE1Q9UJT0 475 aa7.2□□□□□ -1.26
VIM-207ENST00000495528 BAZ2BQ9UIF8 2168 aaKnown RBP7.2□□□□□ -1.26
VIM-207ENST00000495528 TMEM221A6NGB7 291 aa7.19□□□□□ -1.26
VIM-207ENST00000495528 CXorf49A8MYA2 514 aaPredicted RBP7.19□□□□□ -1.26
VIM-207ENST00000495528 PRR5-ARHGAP8B1AHC4 643 aa7.19□□□□□ -1.26
VIM-207ENST00000495528 LOC730098B7Z3J9 87 aa7.19□□□□□ -1.26
VIM-207ENST00000495528 E7EWF7 191 aa7.19□□□□□ -1.26
VIM-207ENST00000495528 M0R296 226 aa7.19□□□□□ -1.26
VIM-207ENST00000495528 GPR32O75388 356 aa7.19□□□□□ -1.26
VIM-207ENST00000495528 GLP2RO95838 553 aa7.19□□□□□ -1.26
VIM-207ENST00000495528 ALOX15P16050 662 aaPredicted RBP7.19□□□□□ -1.26
VIM-207ENST00000495528 PDCP20941 246 aa7.19□□□□□ -1.26
VIM-207ENST00000495528 NRIP1P48552 1158 aa7.19□□□□□ -1.26
VIM-207ENST00000495528 GATMP50440 423 aa7.19□□□□□ -1.26
VIM-207ENST00000495528 SCNN1GP51170 649 aa7.19□□□□□ -1.26
VIM-207ENST00000495528 MRPS6P82932 125 aaKnown RBP7.19□□□□□ -1.26
VIM-207ENST00000495528 ZXDAP98168 799 aa7.19□□□□□ -1.26
VIM-207ENST00000495528 COASYQ13057 564 aa7.19□□□□□ -1.26
VIM-207ENST00000495528 TARDBPQ13148 414 aaKnown RBP eCLIP7.19□□□□□ -1.26
VIM-207ENST00000495528 PPP2R5AQ15172 486 aa7.19□□□□□ -1.26
VIM-207ENST00000495528 ADCK5Q3MIX3 580 aa7.19□□□□□ -1.26
VIM-207ENST00000495528 SRBD1Q8N5C6 995 aaKnown RBP7.19□□□□□ -1.26
VIM-207ENST00000495528 NCOA7Q8NI08 942 aa7.19□□□□□ -1.26
VIM-207ENST00000495528 RRP36Q96EU6 259 aaKnown RBP7.19□□□□□ -1.26
VIM-207ENST00000495528 CDHR1Q96JP9 859 aa7.19□□□□□ -1.26
VIM-207ENST00000495528 JAKMIP1Q96N16 626 aaKnown RBP7.19□□□□□ -1.26
VIM-207ENST00000495528 NEK1Q96PY6 1258 aa7.19□□□□□ -1.26
VIM-207ENST00000495528 MYOCQ99972 504 aa7.19□□□□□ -1.26
VIM-207ENST00000495528 SPZ1Q9BXG8 430 aa7.19□□□□□ -1.26
VIM-207ENST00000495528 FTHL17Q9BXU8 183 aa7.19□□□□□ -1.26
VIM-207ENST00000495528 GPR87Q9BY21 358 aa7.19□□□□□ -1.26
VIM-207ENST00000495528 KRTAP3-1Q9BYR8 98 aa7.19□□□□□ -1.26
VIM-207ENST00000495528 CDH19Q9H159 772 aa7.19□□□□□ -1.26
VIM-207ENST00000495528 SMARCAD1Q9H4L7 1026 aa7.19□□□□□ -1.26
VIM-207ENST00000495528 TCF7L1Q9HCS4 588 aa7.19□□□□□ -1.26
VIM-207ENST00000495528 PADI3Q9ULW8 664 aa7.19□□□□□ -1.26
VIM-207ENST00000495528 BARX2Q9UMQ3 279 aaPredicted RBP7.19□□□□□ -1.26
VIM-207ENST00000495528 UBIAD1Q9Y5Z9 338 aa7.19□□□□□ -1.26
VIM-207ENST00000495528 TECTAO75443 2155 aa7.19□□□□□ -1.26
VIM-207ENST00000495528 hCG_1642624A0A1W2PR95 340 aa7.18□□□□□ -1.26
VIM-207ENST00000495528 RRN3P2A6NIE6 340 aa7.18□□□□□ -1.26
VIM-207ENST00000495528 PER2O15055 1255 aa7.18□□□□□ -1.26
VIM-207ENST00000495528 PLEKHA8P1O95397 391 aa7.18□□□□□ -1.26
VIM-207ENST00000495528 SCGB1D2O95969 90 aa7.18□□□□□ -1.26
VIM-207ENST00000495528 STAG3L1P0CL83 205 aa7.18□□□□□ -1.26
VIM-207ENST00000495528 CPA1P15085 419 aa7.18□□□□□ -1.26
VIM-207ENST00000495528 DDCP20711 480 aa7.18□□□□□ -1.26
VIM-207ENST00000495528 SMARCA1P28370 1054 aa7.18□□□□□ -1.26
VIM-207ENST00000495528 TCF15Q12870 199 aa7.18□□□□□ -1.26
VIM-207ENST00000495528 SP140Q13342 867 aa7.18□□□□□ -1.26
VIM-207ENST00000495528 UBE2SQ16763 222 aa7.18□□□□□ -1.26
VIM-207ENST00000495528 SPDYAQ5MJ70 313 aa7.18□□□□□ -1.26
VIM-207ENST00000495528 MB21D2Q8IYB1 491 aaPredicted RBP7.18□□□□□ -1.26
VIM-207ENST00000495528 SMRP1Q8NCR6 262 aa7.18□□□□□ -1.26
VIM-207ENST00000495528 CTCFLQ8NI51 663 aaPredicted RBP7.18□□□□□ -1.26
VIM-207ENST00000495528 TRAPPC12Q8WVT3 735 aa7.18□□□□□ -1.26
VIM-207ENST00000495528 TFAP2CQ92754 450 aa7.18□□□□□ -1.26
VIM-207ENST00000495528 PPP2R3CQ969Q6 453 aa7.18□□□□□ -1.26
VIM-207ENST00000495528 CYFIP2Q96F07 1278 aa7.18□□□□□ -1.26
VIM-207ENST00000495528 CLPTM1LQ96KA5 538 aa7.18□□□□□ -1.26
VIM-207ENST00000495528 RPGRIP1Q96KN7 1286 aa7.18□□□□□ -1.26
VIM-207ENST00000495528 MAP3K14Q99558 947 aa7.18□□□□□ -1.26
VIM-207ENST00000495528 MRI1Q9BV20 369 aa7.18□□□□□ -1.26
VIM-207ENST00000495528 GTPBP4Q9BZE4 634 aaKnown RBP7.18□□□□□ -1.26
VIM-207ENST00000495528 PSTPIP2Q9H939 334 aa7.18□□□□□ -1.26
VIM-207ENST00000495528 LY9Q9HBG7 655 aa7.18□□□□□ -1.26
VIM-207ENST00000495528 MOCS1Q9NZB8 636 aa7.18□□□□□ -1.26
VIM-207ENST00000495528 PCDHA6Q9UN73 950 aa7.18□□□□□ -1.26
VIM-207ENST00000495528 USP15Q9Y4E8 981 aaPredicted RBP7.18□□□□□ -1.26
VIM-207ENST00000495528 PCDHB1Q9Y5F3 818 aa7.18□□□□□ -1.26
VIM-207ENST00000495528 TRPV2Q9Y5S1 764 aa7.18□□□□□ -1.26
VIM-207ENST00000495528 SQORQ9Y6N5 450 aa7.18□□□□□ -1.26
VIM-207ENST00000495528 MYH6P13533 1939 aa7.18□□□□□ -1.26
VIM-207ENST00000495528 LAMA4Q16363 1823 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms