RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 EFHD1Q9BUP0 239 aa2.48□□□□□ -2.01
PTPN12-212ENST00000494248 ABCG4Q9H172 646 aa2.48□□□□□ -2.01
PTPN12-212ENST00000494248 DHX36Q9H2U1 1008 aaKnown RBP2.48□□□□□ -2.01
PTPN12-212ENST00000494248 PLEKHA5Q9HAU0 1116 aa2.48□□□□□ -2.01
PTPN12-212ENST00000494248 ARFGAP3Q9NP61 516 aa2.48□□□□□ -2.01
PTPN12-212ENST00000494248 ZCCHC17Q9NP64 241 aaKnown RBP2.48□□□□□ -2.01
PTPN12-212ENST00000494248 NMRK2Q9NPI5 230 aa2.48□□□□□ -2.01
PTPN12-212ENST00000494248 GJB4Q9NTQ9 266 aa2.48□□□□□ -2.01
PTPN12-212ENST00000494248 LMBRD1Q9NUN5 540 aa2.48□□□□□ -2.01
PTPN12-212ENST00000494248 PNPOQ9NVS9 261 aa2.48□□□□□ -2.01
PTPN12-212ENST00000494248 ZSCAN32Q9NX65 697 aa2.48□□□□□ -2.01
PTPN12-212ENST00000494248 DCAF16Q9NXF7 216 aa2.48□□□□□ -2.01
PTPN12-212ENST00000494248 HESX1Q9UBX0 185 aa2.48□□□□□ -2.01
PTPN12-212ENST00000494248 STAP2Q9UGK3 403 aa2.48□□□□□ -2.01
PTPN12-212ENST00000494248 AMFRQ9UKV5 643 aa2.48□□□□□ -2.01
PTPN12-212ENST00000494248 NDRG4Q9ULP0 352 aaKnown RBP2.48□□□□□ -2.01
PTPN12-212ENST00000494248 PLEKHM1Q9Y4G2 1056 aa2.48□□□□□ -2.01
PTPN12-212ENST00000494248 PCDHGA9Q9Y5G4 932 aaKnown RBP2.48□□□□□ -2.01
PTPN12-212ENST00000494248 PCDHGA8Q9Y5G5 932 aa2.48□□□□□ -2.01
PTPN12-212ENST00000494248 PCDHGA7Q9Y5G6 932 aa2.48□□□□□ -2.01
PTPN12-212ENST00000494248 PCDHGA6Q9Y5G7 932 aa2.48□□□□□ -2.01
PTPN12-212ENST00000494248 PCDHGA3Q9Y5H0 932 aa2.48□□□□□ -2.01
PTPN12-212ENST00000494248 HS3ST3B1Q9Y662 390 aa2.48□□□□□ -2.01
PTPN12-212ENST00000494248 IKBKGQ9Y6K9 419 aa2.48□□□□□ -2.01
PTPN12-212ENST00000494248 SYNDIG1LA6NDD5 238 aa2.47□□□□□ -2.01
PTPN12-212ENST00000494248 RRN3P2A6NIE6 340 aa2.47□□□□□ -2.01
PTPN12-212ENST00000494248 B4DGG1 531 aa2.47□□□□□ -2.01
PTPN12-212ENST00000494248 TPP1O14773 563 aa2.47□□□□□ -2.01
PTPN12-212ENST00000494248 TNFRSF13BO14836 293 aaPredicted RBP2.47□□□□□ -2.01
PTPN12-212ENST00000494248 DCLK1O15075 740 aa2.47□□□□□ -2.01
PTPN12-212ENST00000494248 CTNND1O60716 968 aaKnown RBP2.47□□□□□ -2.01
PTPN12-212ENST00000494248 DTNBO60941 627 aa2.47□□□□□ -2.01
PTPN12-212ENST00000494248 TIPRLO75663 272 aa2.47□□□□□ -2.01
PTPN12-212ENST00000494248 ZBED1O96006 694 aa2.47□□□□□ -2.01
PTPN12-212ENST00000494248 PYGLP06737 847 aa2.47□□□□□ -2.01
PTPN12-212ENST00000494248 CCDC159P0C7I6 412 aa2.47□□□□□ -2.01
PTPN12-212ENST00000494248 PDCP20941 246 aa2.47□□□□□ -2.01
PTPN12-212ENST00000494248 TNFRSF8P28908 595 aa2.47□□□□□ -2.01
PTPN12-212ENST00000494248 ELF1P32519 619 aa2.47□□□□□ -2.01
PTPN12-212ENST00000494248 PAPOLAP51003 745 aaKnown RBP2.47□□□□□ -2.01
PTPN12-212ENST00000494248 PDE6CP51160 858 aa2.47□□□□□ -2.01
PTPN12-212ENST00000494248 NAP1L1P55209 391 aaKnown RBP2.47□□□□□ -2.01
PTPN12-212ENST00000494248 ZXDBP98169 803 aa2.47□□□□□ -2.01
PTPN12-212ENST00000494248 TNFAIP2Q03169 654 aa2.47□□□□□ -2.01
PTPN12-212ENST00000494248 CFHR1Q03591 330 aa2.47□□□□□ -2.01
PTPN12-212ENST00000494248 PCBP2Q15366 365 aaKnown RBP eCLIP2.47□□□□□ -2.01
PTPN12-212ENST00000494248 ZKSCAN8Q15776 578 aaPredicted RBP2.47□□□□□ -2.01
PTPN12-212ENST00000494248 HSP90B2PQ58FF3 399 aa2.47□□□□□ -2.01
PTPN12-212ENST00000494248 RNASE12Q5GAN4 147 aaKnown RBP2.47□□□□□ -2.01
PTPN12-212ENST00000494248 DENND2CQ68D51 928 aa2.47□□□□□ -2.01
PTPN12-212ENST00000494248 ITPRIPL1Q6GPH6 555 aa2.47□□□□□ -2.01
PTPN12-212ENST00000494248 TMCO3Q6UWJ1 677 aa2.47□□□□□ -2.01
PTPN12-212ENST00000494248 NEK10Q6ZWH5 1172 aa2.47□□□□□ -2.01
PTPN12-212ENST00000494248 KRTAP5-5Q701N2 237 aaPredicted RBP2.47□□□□□ -2.01
PTPN12-212ENST00000494248 RTL10Q7L3V2 364 aa2.47□□□□□ -2.01
PTPN12-212ENST00000494248 CATSPER4Q7RTX7 472 aa2.47□□□□□ -2.01
PTPN12-212ENST00000494248 BCDIN3DQ7Z5W3 292 aaKnown RBP2.47□□□□□ -2.01
PTPN12-212ENST00000494248 SDCCAG8Q86SQ7 713 aaPredicted RBP2.47□□□□□ -2.01
PTPN12-212ENST00000494248 CAND1Q86VP6 1230 aaKnown RBP2.47□□□□□ -2.01
PTPN12-212ENST00000494248 SFTPA1Q8IWL2 248 aa2.47□□□□□ -2.01
PTPN12-212ENST00000494248 ARFGAP1Q8N6T3 406 aa2.47□□□□□ -2.01
PTPN12-212ENST00000494248 MSANTD4Q8NCY6 345 aa2.47□□□□□ -2.01
PTPN12-212ENST00000494248 SLC35G2Q8TBE7 412 aa2.47□□□□□ -2.01
PTPN12-212ENST00000494248 BRIX1Q8TDN6 353 aaKnown RBP2.47□□□□□ -2.01
PTPN12-212ENST00000494248 IPCEF1Q8WWN9 437 aaPredicted RBP2.47□□□□□ -2.01
PTPN12-212ENST00000494248 IGFBPL1Q8WX77 278 aa2.47□□□□□ -2.01
PTPN12-212ENST00000494248 N4BP2L2Q92802 583 aaPredicted RBP2.47□□□□□ -2.01
PTPN12-212ENST00000494248 ZNF479Q96JC4 524 aa2.47□□□□□ -2.01
PTPN12-212ENST00000494248 FAM84BQ96KN1 310 aaPredicted RBP2.47□□□□□ -2.01
PTPN12-212ENST00000494248 UBXN10Q96LJ8 280 aa2.47□□□□□ -2.01
PTPN12-212ENST00000494248 LRGUKQ96M69 825 aa2.47□□□□□ -2.01
PTPN12-212ENST00000494248 TREX2Q9BQ50 279 aaPredicted RBP2.47□□□□□ -2.01
PTPN12-212ENST00000494248 FAM234AQ9H0X4 552 aa2.47□□□□□ -2.01
PTPN12-212ENST00000494248 SLC12A5Q9H2X9 1139 aa2.47□□□□□ -2.01
PTPN12-212ENST00000494248 ELAC1Q9H777 363 aaKnown RBP2.47□□□□□ -2.01
PTPN12-212ENST00000494248 FAM204AQ9H8W3 233 aa2.47□□□□□ -2.01
PTPN12-212ENST00000494248 SARS2Q9NP81 518 aaKnown RBP2.47□□□□□ -2.01
PTPN12-212ENST00000494248 ATP8A2Q9NTI2 1148 aa2.47□□□□□ -2.01
PTPN12-212ENST00000494248 PDRG1Q9NUG6 133 aa2.47□□□□□ -2.01
PTPN12-212ENST00000494248 MRGBPQ9NV56 204 aa2.47□□□□□ -2.01
PTPN12-212ENST00000494248 TMEM184CQ9NVA4 438 aa2.47□□□□□ -2.01
PTPN12-212ENST00000494248 COMMD8Q9NX08 183 aa2.47□□□□□ -2.01
PTPN12-212ENST00000494248 NSMCE4AQ9NXX6 385 aa2.47□□□□□ -2.01
PTPN12-212ENST00000494248 ASIC5Q9NY37 505 aa2.47□□□□□ -2.01
PTPN12-212ENST00000494248 FNIP2Q9P278 1114 aa2.47□□□□□ -2.01
PTPN12-212ENST00000494248 GIMAP2Q9UG22 337 aa2.47□□□□□ -2.01
PTPN12-212ENST00000494248 RABL2BQ9UNT1 228 aa2.47□□□□□ -2.01
PTPN12-212ENST00000494248 PA2G4Q9UQ80 394 aaKnown RBP2.47□□□□□ -2.01
PTPN12-212ENST00000494248 SMC3Q9UQE7 1217 aa2.47□□□□□ -2.01
PTPN12-212ENST00000494248 CRYL1Q9Y2S2 319 aa2.47□□□□□ -2.01
PTPN12-212ENST00000494248 A0A1B0GVY2 172 aa2.46□□□□□ -2.02
PTPN12-212ENST00000494248 TMEM110-MUSTN1A8MSY1 372 aa2.46□□□□□ -2.02
PTPN12-212ENST00000494248 RASA4BC9J798 803 aa2.46□□□□□ -2.02
PTPN12-212ENST00000494248 F5H0A9 414 aaPredicted RBP2.46□□□□□ -2.02
PTPN12-212ENST00000494248 EYA2O00167 538 aa2.46□□□□□ -2.02
PTPN12-212ENST00000494248 IPO5O00410 1097 aaKnown RBP2.46□□□□□ -2.02
PTPN12-212ENST00000494248 CES2O00748 559 aa2.46□□□□□ -2.02
PTPN12-212ENST00000494248 RASA4O43374 803 aa2.46□□□□□ -2.02
PTPN12-212ENST00000494248 FRS3O43559 492 aa2.46□□□□□ -2.02
PTPN12-212ENST00000494248 DKC1O60832 514 aaKnown RBP eCLIP2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms