RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 CCDC191Q8NCU4 936 aa2.74□□□□□ -1.97
CDC42EP3-205ENST00000494083 OR10H5Q8NGA6 315 aa2.74□□□□□ -1.97
CDC42EP3-205ENST00000494083 LMBR1Q8WVP7 490 aa2.74□□□□□ -1.97
CDC42EP3-205ENST00000494083 DNAAF4Q8WXU2 420 aa2.74□□□□□ -1.97
CDC42EP3-205ENST00000494083 PTCD3Q96EY7 689 aaKnown RBP2.74□□□□□ -1.97
CDC42EP3-205ENST00000494083 PDCD2LQ9BRP1 358 aa2.74□□□□□ -1.97
CDC42EP3-205ENST00000494083 BICC1Q9H694 974 aaKnown RBP2.74□□□□□ -1.97
CDC42EP3-205ENST00000494083 SLC40A1Q9NP59 571 aa2.74□□□□□ -1.97
CDC42EP3-205ENST00000494083 GPRC5DQ9NZD1 345 aa2.74□□□□□ -1.97
CDC42EP3-205ENST00000494083 AIPL1Q9NZN9 384 aa2.74□□□□□ -1.97
CDC42EP3-205ENST00000494083 CNOT7Q9UIV1 285 aaKnown RBP2.74□□□□□ -1.97
CDC42EP3-205ENST00000494083 USP15Q9Y4E8 981 aaPredicted RBP2.74□□□□□ -1.97
CDC42EP3-205ENST00000494083 UTP18Q9Y5J1 556 aaKnown RBP eCLIP2.74□□□□□ -1.97
CDC42EP3-205ENST00000494083 HELZP42694 1942 aaKnown RBP2.74□□□□□ -1.97
CDC42EP3-205ENST00000494083 CASQ2O14958 399 aaPredicted RBP2.74□□□□□ -1.97
CDC42EP3-205ENST00000494083 CHUKO15111 745 aa2.74□□□□□ -1.97
CDC42EP3-205ENST00000494083 ZSCAN12O43309 604 aa2.74□□□□□ -1.97
CDC42EP3-205ENST00000494083 TSPAN6O43657 245 aa2.74□□□□□ -1.97
CDC42EP3-205ENST00000494083 NDUFA10O95299 355 aa2.74□□□□□ -1.97
CDC42EP3-205ENST00000494083 ABHD16AO95870 558 aa2.74□□□□□ -1.97
CDC42EP3-205ENST00000494083 ITGB1P05556 798 aa2.74□□□□□ -1.97
CDC42EP3-205ENST00000494083 ELANEP08246 267 aa2.74□□□□□ -1.97
CDC42EP3-205ENST00000494083 LTA4HP09960 611 aaKnown RBP2.74□□□□□ -1.97
CDC42EP3-205ENST00000494083 XPAP23025 273 aaPredicted RBP2.74□□□□□ -1.97
CDC42EP3-205ENST00000494083 IVDP26440 423 aa2.74□□□□□ -1.97
CDC42EP3-205ENST00000494083 ALDH1A3P47895 512 aa2.74□□□□□ -1.97
CDC42EP3-205ENST00000494083 CHN2P52757 468 aa2.74□□□□□ -1.97
CDC42EP3-205ENST00000494083 GALNT2Q10471 571 aa2.74□□□□□ -1.97
CDC42EP3-205ENST00000494083 MTMR1Q13613 665 aa2.74□□□□□ -1.97
CDC42EP3-205ENST00000494083 DCTN1Q14203 1278 aa2.74□□□□□ -1.97
CDC42EP3-205ENST00000494083 CLPPQ16740 277 aaPredicted RBP2.74□□□□□ -1.97
CDC42EP3-205ENST00000494083 UGT8Q16880 541 aa2.74□□□□□ -1.97
CDC42EP3-205ENST00000494083 MCMDC2Q4G0Z9 681 aa2.74□□□□□ -1.97
CDC42EP3-205ENST00000494083 HSP90AB3PQ58FF7 597 aa2.74□□□□□ -1.97
CDC42EP3-205ENST00000494083 EARS2Q5JPH6 523 aaKnown RBP2.74□□□□□ -1.97
CDC42EP3-205ENST00000494083 SYCP2LQ5T4T6 812 aa2.74□□□□□ -1.97
CDC42EP3-205ENST00000494083 GPRIN1Q7Z2K8 1008 aa2.74□□□□□ -1.97
CDC42EP3-205ENST00000494083 MIGA1Q8NAN2 632 aa2.74□□□□□ -1.97
CDC42EP3-205ENST00000494083 RIN2Q8WYP3 895 aaPredicted RBP2.74□□□□□ -1.97
CDC42EP3-205ENST00000494083 RRP36Q96EU6 259 aaKnown RBP2.74□□□□□ -1.97
CDC42EP3-205ENST00000494083 DUS3LQ96G46 650 aaKnown RBP2.74□□□□□ -1.97
CDC42EP3-205ENST00000494083 CDC5LQ99459 802 aaKnown RBP2.74□□□□□ -1.97
CDC42EP3-205ENST00000494083 CCDC8Q9H0W5 538 aaPredicted RBP2.74□□□□□ -1.97
CDC42EP3-205ENST00000494083 ISCUQ9H1K1 167 aa2.74□□□□□ -1.97
CDC42EP3-205ENST00000494083 NEUROG2Q9H2A3 272 aa2.74□□□□□ -1.97
CDC42EP3-205ENST00000494083 FAM204AQ9H8W3 233 aa2.74□□□□□ -1.97
CDC42EP3-205ENST00000494083 TCP11L1Q9NUJ3 509 aa2.74□□□□□ -1.97
CDC42EP3-205ENST00000494083 GRHL1Q9NZI5 618 aa2.74□□□□□ -1.97
CDC42EP3-205ENST00000494083 IFNKQ9P0W0 207 aa2.74□□□□□ -1.97
CDC42EP3-205ENST00000494083 CIDEBQ9UHD4 219 aa2.74□□□□□ -1.97
CDC42EP3-205ENST00000494083 TCEAL9Q9UHQ7 104 aa2.74□□□□□ -1.97
CDC42EP3-205ENST00000494083 HERC5Q9UII4 1024 aaKnown RBP2.74□□□□□ -1.97
CDC42EP3-205ENST00000494083 AGAP1Q9UPQ3 857 aa2.74□□□□□ -1.97
CDC42EP3-205ENST00000494083 RUVBL1Q9Y265 456 aaKnown RBP2.74□□□□□ -1.97
CDC42EP3-205ENST00000494083 C15orf41Q9Y2V0 281 aa2.74□□□□□ -1.97
CDC42EP3-205ENST00000494083 TMEM131Q92545 1883 aa2.74□□□□□ -1.97
CDC42EP3-205ENST00000494083 MUC22E2RYF6 1773 aaPredicted RBP2.74□□□□□ -1.97
CDC42EP3-205ENST00000494083 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 VGLL3A8MV65 326 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 GRM8O00222 908 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 O00370 1275 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 FOXN1O15353 648 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 AKR1B10O60218 316 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 TFRCP02786 760 aaKnown RBP2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 ATP1A1P05023 1023 aaKnown RBP2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 SMIM18P0DKX4 95 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 PCSK1P29120 753 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 GPR15P49685 360 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 RAP2BP61225 183 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 IFFO1Q0D2I5 559 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 TAZQ16635 292 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 TCP11X2Q5H9J9 407 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 AFMIDQ63HM1 303 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 IQSEC1Q6DN90 963 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 CENPPQ6IPU0 288 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 FAM171BQ6P995 826 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 CYB5D1Q6P9G0 228 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 Q6YL49 198 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 DDX46Q7L014 1031 aaKnown RBP2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 KCNK18Q7Z418 384 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 C11orf96Q7Z7L8 435 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 KLHDC8BQ8IXV7 354 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 RNF10Q8N5U6 811 aaKnown RBP2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 CPSF7Q8N684 471 aaKnown RBP2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 TFAP2CQ92754 450 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 NEK1Q96PY6 1258 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 TRAPPC9Q96Q05 1148 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 SEC62Q99442 399 aaKnown RBP2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 RTFDC1Q9BY42 306 aaPredicted RBP2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 LRMDAQ9H2I8 198 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 MAGEF1Q9HAY2 307 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 AKIP1Q9NQ31 210 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 SH3GLB2Q9NR46 395 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 CCM2LQ9NUG4 571 aaPredicted RBP2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 TSPYL4Q9UJ04 414 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 FBXO9Q9UK97 447 aaPredicted RBP2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 INTUQ9ULD6 942 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 ZNF532Q9HCE3 1301 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 SMCHD1A6NHR9 2005 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 A0A088AWK7 358 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms