RNA–Protein interactions for RNA: ENST00000493796.5

CD46-217, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-217ENST00000493796 HOXD12P35452 270 aa4.3□□□□□ -1.72
CD46-217ENST00000493796 IDUAP35475 653 aa4.3□□□□□ -1.72
CD46-217ENST00000493796 NR4A2P43354 598 aa4.3□□□□□ -1.72
CD46-217ENST00000493796 VPS41P49754 854 aa4.3□□□□□ -1.72
CD46-217ENST00000493796 RBMS2Q15434 407 aaKnown RBP4.3□□□□□ -1.72
CD46-217ENST00000493796 RAB30Q15771 203 aa4.3□□□□□ -1.72
CD46-217ENST00000493796 SLC9C1Q4G0N8 1177 aa4.3□□□□□ -1.72
CD46-217ENST00000493796 EPHA10Q5JZY3 1008 aa4.3□□□□□ -1.72
CD46-217ENST00000493796 ARL6IP4Q66PJ3 421 aaKnown RBP4.3□□□□□ -1.72
CD46-217ENST00000493796 KYAT3Q6YP21 454 aaKnown RBP4.3□□□□□ -1.72
CD46-217ENST00000493796 MRPL10Q7Z7H8 261 aaKnown RBP4.3□□□□□ -1.72
CD46-217ENST00000493796 RASGRP3Q8IV61 690 aa4.3□□□□□ -1.72
CD46-217ENST00000493796 DEPTORQ8TB45 409 aa4.3□□□□□ -1.72
CD46-217ENST00000493796 GLMPQ8WWB7 406 aa4.3□□□□□ -1.72
CD46-217ENST00000493796 TNIP3Q96KP6 325 aa4.3□□□□□ -1.72
CD46-217ENST00000493796 SGCZQ96LD1 299 aa4.3□□□□□ -1.72
CD46-217ENST00000493796 FCRL5Q96RD9 977 aa4.3□□□□□ -1.72
CD46-217ENST00000493796 EIF3CQ99613 913 aaKnown RBP4.3□□□□□ -1.72
CD46-217ENST00000493796 GATA5Q9BWX5 397 aaPredicted RBP4.3□□□□□ -1.72
CD46-217ENST00000493796 CDCP1Q9H5V8 836 aa4.3□□□□□ -1.72
CD46-217ENST00000493796 MLXIPLQ9NP71 852 aa4.3□□□□□ -1.72
CD46-217ENST00000493796 FSCN3Q9NQT6 498 aa4.3□□□□□ -1.72
CD46-217ENST00000493796 HELLSQ9NRZ9 838 aa4.3□□□□□ -1.72
CD46-217ENST00000493796 ASNSD1Q9NWL6 643 aa4.3□□□□□ -1.72
CD46-217ENST00000493796 AFG3L2Q9Y4W6 797 aa4.3□□□□□ -1.72
CD46-217ENST00000493796 TIAM1Q13009 1591 aa4.3□□□□□ -1.72
CD46-217ENST00000493796 VPS8Q8N3P4 1428 aa4.29□□□□□ -1.72
CD46-217ENST00000493796 ZMYM2Q9UBW7 1377 aa4.29□□□□□ -1.72
CD46-217ENST00000493796 MAP3K4Q9Y6R4 1608 aa4.29□□□□□ -1.72
CD46-217ENST00000493796 GXYLT2A0PJZ3 443 aa4.29□□□□□ -1.72
CD46-217ENST00000493796 J3KTA2 159 aa4.29□□□□□ -1.72
CD46-217ENST00000493796 SOCS2O14508 198 aa4.29□□□□□ -1.72
CD46-217ENST00000493796 NTSR2O95665 410 aa4.29□□□□□ -1.72
CD46-217ENST00000493796 GLP2RO95838 553 aa4.29□□□□□ -1.72
CD46-217ENST00000493796 SLC3A2P08195 630 aaKnown RBP4.29□□□□□ -1.72
CD46-217ENST00000493796 PRF1P14222 555 aa4.29□□□□□ -1.72
CD46-217ENST00000493796 PLCD1P51178 756 aa4.29□□□□□ -1.72
CD46-217ENST00000493796 STIM1Q13586 685 aa4.29□□□□□ -1.72
CD46-217ENST00000493796 LAMB3Q13751 1172 aa4.29□□□□□ -1.72
CD46-217ENST00000493796 ELF2Q15723 593 aa4.29□□□□□ -1.72
CD46-217ENST00000493796 P3H1Q32P28 736 aa4.29□□□□□ -1.72
CD46-217ENST00000493796 EARS2Q5JPH6 523 aaKnown RBP4.29□□□□□ -1.72
CD46-217ENST00000493796 DGKKQ5KSL6 1271 aa4.29□□□□□ -1.72
CD46-217ENST00000493796 MSANTD2Q6P1R3 559 aa4.29□□□□□ -1.72
CD46-217ENST00000493796 RBM44Q6ZP01 1051 aaKnown RBP4.29□□□□□ -1.72
CD46-217ENST00000493796 PIP4P1Q86T03 277 aa4.29□□□□□ -1.72
CD46-217ENST00000493796 SRLQ86TD4 932 aa4.29□□□□□ -1.72
CD46-217ENST00000493796 WIPF2Q8TF74 440 aaPredicted RBP4.29□□□□□ -1.72
CD46-217ENST00000493796 PIGKQ92643 395 aa4.29□□□□□ -1.72
CD46-217ENST00000493796 C18orf8Q96DM3 657 aa4.29□□□□□ -1.72
CD46-217ENST00000493796 HMCESQ96FZ2 354 aa4.29□□□□□ -1.72
CD46-217ENST00000493796 SENP7Q9BQF6 1050 aa4.29□□□□□ -1.72
CD46-217ENST00000493796 STK33Q9BYT3 514 aa4.29□□□□□ -1.72
CD46-217ENST00000493796 PTPRKQ15262 1439 aa4.29□□□□□ -1.72
CD46-217ENST00000493796 PNMA6EA0A0J9YXQ4 647 aa4.28□□□□□ -1.72
CD46-217ENST00000493796 C2CD4BA6NLJ0 364 aa4.28□□□□□ -1.72
CD46-217ENST00000493796 PCDH17O14917 1159 aa4.28□□□□□ -1.72
CD46-217ENST00000493796 NPC1O15118 1278 aa4.28□□□□□ -1.72
CD46-217ENST00000493796 USP12O75317 370 aa4.28□□□□□ -1.72
CD46-217ENST00000493796 TAF5LO75529 589 aa4.28□□□□□ -1.72
CD46-217ENST00000493796 BMP15O95972 392 aa4.28□□□□□ -1.72
CD46-217ENST00000493796 IGKV2-30P06310 120 aa4.28□□□□□ -1.72
CD46-217ENST00000493796 ITGA5P08648 1049 aa4.28□□□□□ -1.72
CD46-217ENST00000493796 CD63P08962 238 aa4.28□□□□□ -1.72
CD46-217ENST00000493796 CYP19A1P11511 503 aaPredicted RBP4.28□□□□□ -1.72
CD46-217ENST00000493796 ABCB4P21439 1286 aa4.28□□□□□ -1.72
CD46-217ENST00000493796 RPS6KB1P23443 525 aa4.28□□□□□ -1.72
CD46-217ENST00000493796 HOXA7P31268 230 aaPredicted RBP4.28□□□□□ -1.72
CD46-217ENST00000493796 SLC8A1P32418 973 aa4.28□□□□□ -1.72
CD46-217ENST00000493796 ZNF84P51523 738 aa4.28□□□□□ -1.72
CD46-217ENST00000493796 SRSF1Q07955 248 aaKnown RBP eCLIP4.28□□□□□ -1.72
CD46-217ENST00000493796 CSHL1Q14406 222 aa4.28□□□□□ -1.72
CD46-217ENST00000493796 MAP9Q49MG5 647 aa4.28□□□□□ -1.72
CD46-217ENST00000493796 C16orf89Q6UX73 402 aa4.28□□□□□ -1.72
CD46-217ENST00000493796 KRT27Q7Z3Y8 459 aa4.28□□□□□ -1.72
CD46-217ENST00000493796 TTC30AQ86WT1 665 aa4.28□□□□□ -1.72
CD46-217ENST00000493796 ANKRD13BQ86YJ7 626 aa4.28□□□□□ -1.72
CD46-217ENST00000493796 RFX6Q8HWS3 928 aa4.28□□□□□ -1.72
CD46-217ENST00000493796 LAS2Q8IYD9 372 aa4.28□□□□□ -1.72
CD46-217ENST00000493796 FAM186BQ8IYM0 893 aa4.28□□□□□ -1.72
CD46-217ENST00000493796 NRACQ8N912 160 aa4.28□□□□□ -1.72
CD46-217ENST00000493796 BCAS4Q8TDM0 211 aa4.28□□□□□ -1.72
CD46-217ENST00000493796 ASB12Q8WXK4 309 aa4.28□□□□□ -1.72
CD46-217ENST00000493796 CELF1Q92879 486 aaKnown RBP4.28□□□□□ -1.72
CD46-217ENST00000493796 GJA10Q969M2 543 aa4.28□□□□□ -1.72
CD46-217ENST00000493796 TRMT61AQ96FX7 289 aaKnown RBP4.28□□□□□ -1.72
CD46-217ENST00000493796 ZNF845Q96IR2 970 aaPredicted RBP4.28□□□□□ -1.72
CD46-217ENST00000493796 PAAF1Q9BRP4 392 aa4.28□□□□□ -1.72
CD46-217ENST00000493796 SLC39A10Q9ULF5 831 aa4.28□□□□□ -1.72
CD46-217ENST00000493796 SUPT6HQ7KZ85 1726 aaKnown RBP4.28□□□□□ -1.72
CD46-217ENST00000493796 FRMPD1Q5SYB0 1578 aa4.27□□□□□ -1.73
CD46-217ENST00000493796 SPATA31A5Q5VU36 1347 aa4.27□□□□□ -1.73
CD46-217ENST00000493796 SPATA31A7Q8IWB4 1347 aa4.27□□□□□ -1.73
CD46-217ENST00000493796 MAPKBP1O60336 1514 aa4.27□□□□□ -1.73
CD46-217ENST00000493796 LRRC9Q6ZRR7 1453 aa4.27□□□□□ -1.73
CD46-217ENST00000493796 FYCO1Q9BQS8 1478 aa4.27□□□□□ -1.73
CD46-217ENST00000493796 LY6G6EA0A0G2JKS1 128 aa4.27□□□□□ -1.73
CD46-217ENST00000493796 SLC22A23A1A5C7 686 aa4.27□□□□□ -1.73
CD46-217ENST00000493796 ANXA6P08133 673 aa4.27□□□□□ -1.73
CD46-217ENST00000493796 TMEM191BP0C7N4 346 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms