RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 SLC35F5Q8WV83 523 aa9.79□□□□□ -0.84
BRCA1-219ENST00000491747 WBP2Q969T9 261 aa9.79□□□□□ -0.84
BRCA1-219ENST00000491747 ZFRQ96KR1 1074 aaKnown RBP9.79□□□□□ -0.84
BRCA1-219ENST00000491747 FBXO44Q9H4M3 255 aa9.79□□□□□ -0.84
BRCA1-219ENST00000491747 GKN1Q9NS71 199 aa9.79□□□□□ -0.84
BRCA1-219ENST00000491747 KLC4Q9NSK0 619 aa9.79□□□□□ -0.84
BRCA1-219ENST00000491747 GTSE1Q9NYZ3 720 aa9.79□□□□□ -0.84
BRCA1-219ENST00000491747 MTF2Q9Y483 593 aaPredicted RBP9.79□□□□□ -0.84
BRCA1-219ENST00000491747 A0A0A6YYK5 440 aaPredicted RBP9.79□□□□□ -0.84
BRCA1-219ENST00000491747 OTOL1A6NHN0 477 aaPredicted RBP9.79□□□□□ -0.84
BRCA1-219ENST00000491747 BHMG1C9JSJ3 638 aaPredicted RBP9.79□□□□□ -0.84
BRCA1-219ENST00000491747 PIK3R2O00459 728 aa9.79□□□□□ -0.84
BRCA1-219ENST00000491747 PRKCIP41743 596 aa9.79□□□□□ -0.84
BRCA1-219ENST00000491747 STARD6P59095 220 aa9.79□□□□□ -0.84
BRCA1-219ENST00000491747 SLC7A9P82251 487 aa9.79□□□□□ -0.84
BRCA1-219ENST00000491747 USP4Q13107 963 aa9.79□□□□□ -0.84
BRCA1-219ENST00000491747 MLF2Q15773 248 aaPredicted RBP9.79□□□□□ -0.84
BRCA1-219ENST00000491747 PMF1Q6P1K2 205 aa9.79□□□□□ -0.84
BRCA1-219ENST00000491747 DENND1BQ6P3S1 775 aa9.79□□□□□ -0.84
BRCA1-219ENST00000491747 YAF2Q8IY57 180 aa9.79□□□□□ -0.84
BRCA1-219ENST00000491747 TMEM105Q8N8V8 129 aa9.79□□□□□ -0.84
BRCA1-219ENST00000491747 GPATCH11Q8N954 259 aa9.79□□□□□ -0.84
BRCA1-219ENST00000491747 TTC16Q8NEE8 873 aa9.79□□□□□ -0.84
BRCA1-219ENST00000491747 FLCNQ8NFG4 579 aa9.79□□□□□ -0.84
BRCA1-219ENST00000491747 TPCN2Q8NHX9 752 aa9.79□□□□□ -0.84
BRCA1-219ENST00000491747 SH3RF2Q8TEC5 729 aa9.79□□□□□ -0.84
BRCA1-219ENST00000491747 ZNF606Q8WXB4 792 aa9.79□□□□□ -0.84
BRCA1-219ENST00000491747 P3H4Q92791 437 aa9.79□□□□□ -0.84
BRCA1-219ENST00000491747 IRF7Q92985 503 aa9.79□□□□□ -0.84
BRCA1-219ENST00000491747 CCDC114Q96M63 670 aa9.79□□□□□ -0.84
BRCA1-219ENST00000491747 FAM83CQ9BQN1 747 aa9.79□□□□□ -0.84
BRCA1-219ENST00000491747 AP1M1Q9BXS5 423 aa9.79□□□□□ -0.84
BRCA1-219ENST00000491747 DDX47Q9H0S4 455 aaKnown RBP9.79□□□□□ -0.84
BRCA1-219ENST00000491747 TBC1D17Q9HA65 648 aa9.79□□□□□ -0.84
BRCA1-219ENST00000491747 HPS4Q9NQG7 708 aa9.79□□□□□ -0.84
BRCA1-219ENST00000491747 FAM114A2Q9NRY5 505 aa9.79□□□□□ -0.84
BRCA1-219ENST00000491747 SMPD4Q9NXE4 827 aa9.79□□□□□ -0.84
BRCA1-219ENST00000491747 BCCIPQ9P287 314 aaKnown RBP eCLIP9.79□□□□□ -0.84
BRCA1-219ENST00000491747 HESX1Q9UBX0 185 aa9.79□□□□□ -0.84
BRCA1-219ENST00000491747 NUDT5Q9UKK9 219 aa9.79□□□□□ -0.84
BRCA1-219ENST00000491747 INTUQ9ULD6 942 aa9.79□□□□□ -0.84
BRCA1-219ENST00000491747 ARHGAP26Q9UNA1 814 aa9.79□□□□□ -0.84
BRCA1-219ENST00000491747 UTP11Q9Y3A2 253 aaKnown RBP9.79□□□□□ -0.84
BRCA1-219ENST00000491747 CPQQ9Y646 472 aa9.79□□□□□ -0.84
BRCA1-219ENST00000491747 M0QYV0 167 aa9.78□□□□□ -0.84
BRCA1-219ENST00000491747 LEFTY2O00292 366 aa9.78□□□□□ -0.84
BRCA1-219ENST00000491747 RASSF9O75901 435 aa9.78□□□□□ -0.84
BRCA1-219ENST00000491747 H2AFZP0C0S5 128 aa9.78□□□□□ -0.84
BRCA1-219ENST00000491747 SOX9P48436 509 aa9.78□□□□□ -0.84
BRCA1-219ENST00000491747 RGS7P49802 495 aa9.78□□□□□ -0.84
BRCA1-219ENST00000491747 TKTL1P51854 596 aa9.78□□□□□ -0.84
BRCA1-219ENST00000491747 EIF3BP55884 814 aaKnown RBP9.78□□□□□ -0.84
BRCA1-219ENST00000491747 PFKPQ01813 784 aa9.78□□□□□ -0.84
BRCA1-219ENST00000491747 HECTD3Q5T447 861 aa9.78□□□□□ -0.84
BRCA1-219ENST00000491747 H2AFVQ71UI9 128 aa9.78□□□□□ -0.84
BRCA1-219ENST00000491747 CCDC50Q8IVM0 306 aa9.78□□□□□ -0.84
BRCA1-219ENST00000491747 CACNA2D3Q8IZS8 1091 aa9.78□□□□□ -0.84
BRCA1-219ENST00000491747 RASGEF1CQ8N431 466 aa9.78□□□□□ -0.84
BRCA1-219ENST00000491747 OR2W6PQ8NHA6 318 aa9.78□□□□□ -0.84
BRCA1-219ENST00000491747 DNASE1L2Q92874 299 aa9.78□□□□□ -0.84
BRCA1-219ENST00000491747 DDX23Q9BUQ8 820 aaKnown RBP9.78□□□□□ -0.84
BRCA1-219ENST00000491747 ULBP1Q9BZM6 244 aa9.78□□□□□ -0.84
BRCA1-219ENST00000491747 FOXQ1Q9C009 403 aa9.78□□□□□ -0.84
BRCA1-219ENST00000491747 LINC00597Q9H2U6 94 aa9.78□□□□□ -0.84
BRCA1-219ENST00000491747 MFSD1Q9H3U5 465 aa9.78□□□□□ -0.84
BRCA1-219ENST00000491747 CNOT10Q9H9A5 744 aaKnown RBP9.78□□□□□ -0.84
BRCA1-219ENST00000491747 KIF9Q9HAQ2 790 aa9.78□□□□□ -0.84
BRCA1-219ENST00000491747 TRPV5Q9NQA5 729 aa9.78□□□□□ -0.84
BRCA1-219ENST00000491747 TLR8Q9NR97 1041 aaKnown RBP9.78□□□□□ -0.84
BRCA1-219ENST00000491747 AMACRQ9UHK6 382 aa9.78□□□□□ -0.84
BRCA1-219ENST00000491747 CYTH4Q9UIA0 394 aa9.78□□□□□ -0.84
BRCA1-219ENST00000491747 ZNF318Q5VUA4 2279 aa9.78□□□□□ -0.84
BRCA1-219ENST00000491747 WDFY4Q6ZS81 3184 aa9.78□□□□□ -0.84
BRCA1-219ENST00000491747 MYOFQ9NZM1 2061 aa9.78□□□□□ -0.84
BRCA1-219ENST00000491747 SCAMP3O14828 347 aaKnown RBP9.78□□□□□ -0.84
BRCA1-219ENST00000491747 MDM4O15151 490 aa9.78□□□□□ -0.84
BRCA1-219ENST00000491747 CCDC172P0C7W6 258 aa9.78□□□□□ -0.84
BRCA1-219ENST00000491747 MBL2P11226 248 aaPredicted RBP9.78□□□□□ -0.84
BRCA1-219ENST00000491747 ARSAP15289 507 aa9.78□□□□□ -0.84
BRCA1-219ENST00000491747 TCF3P15923 654 aa9.78□□□□□ -0.84
BRCA1-219ENST00000491747 PFKLP17858 780 aa9.78□□□□□ -0.84
BRCA1-219ENST00000491747 AVPR2P30518 371 aa9.78□□□□□ -0.84
BRCA1-219ENST00000491747 GNA15P30679 374 aa9.78□□□□□ -0.84
BRCA1-219ENST00000491747 GPD2P43304 727 aa9.78□□□□□ -0.84
BRCA1-219ENST00000491747 ADIGQ0VDE8 80 aa9.78□□□□□ -0.84
BRCA1-219ENST00000491747 DRAP1Q14919 205 aaPredicted RBP9.78□□□□□ -0.84
BRCA1-219ENST00000491747 SPDYCQ5MJ68 293 aa9.78□□□□□ -0.84
BRCA1-219ENST00000491747 GKAP1Q5VSY0 366 aaPredicted RBP9.78□□□□□ -0.84
BRCA1-219ENST00000491747 PM20D1Q6GTS8 502 aa9.78□□□□□ -0.84
BRCA1-219ENST00000491747 TPRG1Q6ZUI0 275 aa9.78□□□□□ -0.84
BRCA1-219ENST00000491747 TMC3Q7Z5M5 1100 aa9.78□□□□□ -0.84
BRCA1-219ENST00000491747 SLFN11Q7Z7L1 901 aa9.78□□□□□ -0.84
BRCA1-219ENST00000491747 TAX1BP1Q86VP1 789 aa9.78□□□□□ -0.84
BRCA1-219ENST00000491747 DDX42Q86XP3 938 aaKnown RBP eCLIP9.78□□□□□ -0.84
BRCA1-219ENST00000491747 KCTD13Q8WZ19 329 aa9.78□□□□□ -0.84
BRCA1-219ENST00000491747 SEC14L1Q92503 715 aa9.78□□□□□ -0.84
BRCA1-219ENST00000491747 CHFRQ96EP1 664 aa9.78□□□□□ -0.84
BRCA1-219ENST00000491747 FAM81BQ96LP2 452 aa9.78□□□□□ -0.84
BRCA1-219ENST00000491747 RAB17Q9H0T7 212 aa9.78□□□□□ -0.84
BRCA1-219ENST00000491747 GOLPH3Q9H4A6 298 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms