RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 FBXO10Q9UK96 956 aa7.55□□□□□ -1.2
PDLIM1-203ENST00000490391 C2CD2Q9Y426 696 aa7.55□□□□□ -1.2
PDLIM1-203ENST00000490391 A0A0B4J269 797 aa7.54□□□□□ -1.2
PDLIM1-203ENST00000490391 C10orf142B7Z368 130 aa7.54□□□□□ -1.2
PDLIM1-203ENST00000490391 NEDD8-MDP1E9PL57 170 aa7.54□□□□□ -1.2
PDLIM1-203ENST00000490391 GABRDO14764 452 aa7.54□□□□□ -1.2
PDLIM1-203ENST00000490391 CPLX1O14810 134 aa7.54□□□□□ -1.2
PDLIM1-203ENST00000490391 YKT6O15498 198 aa7.54□□□□□ -1.2
PDLIM1-203ENST00000490391 COCHO43405 550 aa7.54□□□□□ -1.2
PDLIM1-203ENST00000490391 BNIP3LO60238 219 aa7.54□□□□□ -1.2
PDLIM1-203ENST00000490391 LZTS3O60299 673 aaPredicted RBP7.54□□□□□ -1.2
PDLIM1-203ENST00000490391 DTNBO60941 627 aa7.54□□□□□ -1.2
PDLIM1-203ENST00000490391 ATP2C2O75185 946 aa7.54□□□□□ -1.2
PDLIM1-203ENST00000490391 SEMA4FO95754 770 aa7.54□□□□□ -1.2
PDLIM1-203ENST00000490391 ASIC1P78348 528 aa7.54□□□□□ -1.2
PDLIM1-203ENST00000490391 E2F1Q01094 437 aa7.54□□□□□ -1.2
PDLIM1-203ENST00000490391 MYL7Q01449 175 aa7.54□□□□□ -1.2
PDLIM1-203ENST00000490391 BNIP3Q12983 259 aa7.54□□□□□ -1.2
PDLIM1-203ENST00000490391 IGFBP7Q16270 282 aa7.54□□□□□ -1.2
PDLIM1-203ENST00000490391 SV2CQ496J9 727 aa7.54□□□□□ -1.2
PDLIM1-203ENST00000490391 SCARA3Q6AZY7 606 aa7.54□□□□□ -1.2
PDLIM1-203ENST00000490391 SLC39A4Q6P5W5 647 aa7.54□□□□□ -1.2
PDLIM1-203ENST00000490391 BLOC1S2Q6QNY1 142 aa7.54□□□□□ -1.2
PDLIM1-203ENST00000490391 VSTM1Q6UX27 236 aa7.54□□□□□ -1.2
PDLIM1-203ENST00000490391 C1orf186Q6ZWK4 172 aa7.54□□□□□ -1.2
PDLIM1-203ENST00000490391 ADAT2Q7Z6V5 191 aaKnown RBP7.54□□□□□ -1.2
PDLIM1-203ENST00000490391 RBBP8NLQ8NC74 664 aaPredicted RBP7.54□□□□□ -1.2
PDLIM1-203ENST00000490391 ERMNQ8TAM6 284 aa7.54□□□□□ -1.2
PDLIM1-203ENST00000490391 MYLPFQ96A32 169 aa7.54□□□□□ -1.2
PDLIM1-203ENST00000490391 SLC6A18Q96N87 628 aa7.54□□□□□ -1.2
PDLIM1-203ENST00000490391 XPO6Q96QU8 1125 aaKnown RBP7.54□□□□□ -1.2
PDLIM1-203ENST00000490391 ACE2Q9BYF1 805 aaPredicted RBP7.54□□□□□ -1.2
PDLIM1-203ENST00000490391 ASB7Q9H672 318 aa7.54□□□□□ -1.2
PDLIM1-203ENST00000490391 EBF2Q9HAK2 575 aa7.54□□□□□ -1.2
PDLIM1-203ENST00000490391 CRTAC1Q9NQ79 661 aa7.54□□□□□ -1.2
PDLIM1-203ENST00000490391 TMEM30AQ9NV96 361 aa7.54□□□□□ -1.2
PDLIM1-203ENST00000490391 DPP3Q9NY33 737 aa7.54□□□□□ -1.2
PDLIM1-203ENST00000490391 PLEKHB1Q9UF11 243 aaPredicted RBP7.54□□□□□ -1.2
PDLIM1-203ENST00000490391 ABCA2Q9BZC7 2435 aa7.53□□□□□ -1.2
PDLIM1-203ENST00000490391 A0A1W2PR77 199 aa7.53□□□□□ -1.2
PDLIM1-203ENST00000490391 CDRT15L2A8MXV6 281 aa7.53□□□□□ -1.2
PDLIM1-203ENST00000490391 E9PMD0 336 aa7.53□□□□□ -1.2
PDLIM1-203ENST00000490391 F8VP50 259 aa7.53□□□□□ -1.2
PDLIM1-203ENST00000490391 WNT9AO14904 365 aa7.53□□□□□ -1.2
PDLIM1-203ENST00000490391 NPC1O15118 1278 aa7.53□□□□□ -1.2
PDLIM1-203ENST00000490391 OPA1O60313 960 aa7.53□□□□□ -1.2
PDLIM1-203ENST00000490391 FSBPO95073 299 aa7.53□□□□□ -1.2
PDLIM1-203ENST00000490391 ABL1P00519 1130 aa7.53□□□□□ -1.2
PDLIM1-203ENST00000490391 PIGRP01833 764 aa7.53□□□□□ -1.2
PDLIM1-203ENST00000490391 ACADMP11310 421 aa7.53□□□□□ -1.2
PDLIM1-203ENST00000490391 BDNFP23560 247 aa7.53□□□□□ -1.2
PDLIM1-203ENST00000490391 PRKCHP24723 683 aa7.53□□□□□ -1.2
PDLIM1-203ENST00000490391 MATR3P43243 847 aaKnown RBP eCLIP7.53□□□□□ -1.2
PDLIM1-203ENST00000490391 RXRGP48443 463 aa7.53□□□□□ -1.2
PDLIM1-203ENST00000490391 BCAT1P54687 386 aa7.53□□□□□ -1.2
PDLIM1-203ENST00000490391 C21orf59P57076 290 aa7.53□□□□□ -1.2
PDLIM1-203ENST00000490391 GEN1Q17RS7 908 aa7.53□□□□□ -1.2
PDLIM1-203ENST00000490391 RINT1Q6NUQ1 792 aa7.53□□□□□ -1.2
PDLIM1-203ENST00000490391 TMEM86AQ8N2M4 240 aa7.53□□□□□ -1.2
PDLIM1-203ENST00000490391 CXorf38Q8TB03 319 aa7.53□□□□□ -1.2
PDLIM1-203ENST00000490391 PRR11Q96HE9 360 aaPredicted RBP7.53□□□□□ -1.2
PDLIM1-203ENST00000490391 SLC46A1Q96NT5 459 aa7.53□□□□□ -1.2
PDLIM1-203ENST00000490391 DEPDC7Q96QD5 511 aa7.53□□□□□ -1.2
PDLIM1-203ENST00000490391 BBS2Q9BXC9 721 aa7.53□□□□□ -1.2
PDLIM1-203ENST00000490391 DDX19AQ9NUU7 478 aaKnown RBP7.53□□□□□ -1.2
PDLIM1-203ENST00000490391 TJP2Q9UDY2 1190 aa7.53□□□□□ -1.2
PDLIM1-203ENST00000490391 KIAA1024Q9UPX6 916 aa7.53□□□□□ -1.2
PDLIM1-203ENST00000490391 SLC27A6Q9Y2P4 619 aa7.53□□□□□ -1.2
PDLIM1-203ENST00000490391 SH3BP1Q9Y3L3 701 aa7.53□□□□□ -1.2
PDLIM1-203ENST00000490391 SNX14Q9Y5W7 946 aa7.53□□□□□ -1.2
PDLIM1-203ENST00000490391 RP1P56715 2156 aa7.53□□□□□ -1.2
PDLIM1-203ENST00000490391 A0A1W2PPC4 97 aa7.52□□□□□ -1.21
PDLIM1-203ENST00000490391 PMS2P1A4D2B8 440 aa7.52□□□□□ -1.21
PDLIM1-203ENST00000490391 TRIM38O00635 465 aa7.52□□□□□ -1.21
PDLIM1-203ENST00000490391 HNRNPDLO14979 420 aaKnown RBP7.52□□□□□ -1.21
PDLIM1-203ENST00000490391 SIGLEC6O43699 453 aa7.52□□□□□ -1.21
PDLIM1-203ENST00000490391 SYNCRIPO60506 623 aaKnown RBP7.52□□□□□ -1.21
PDLIM1-203ENST00000490391 CSO75390 466 aaKnown RBP7.52□□□□□ -1.21
PDLIM1-203ENST00000490391 PLS3P13797 630 aa7.52□□□□□ -1.21
PDLIM1-203ENST00000490391 GUCY2CP25092 1073 aa7.52□□□□□ -1.21
PDLIM1-203ENST00000490391 PCSK1P29120 753 aa7.52□□□□□ -1.21
PDLIM1-203ENST00000490391 KRT2P35908 639 aa7.52□□□□□ -1.21
PDLIM1-203ENST00000490391 CCT6AP40227 531 aaKnown RBP7.52□□□□□ -1.21
PDLIM1-203ENST00000490391 AFMP43652 599 aa7.52□□□□□ -1.21
PDLIM1-203ENST00000490391 ARRB1P49407 418 aaPredicted RBP7.52□□□□□ -1.21
PDLIM1-203ENST00000490391 CACNA2D1P54289 1103 aa7.52□□□□□ -1.21
PDLIM1-203ENST00000490391 MFAP3P55082 362 aa7.52□□□□□ -1.21
PDLIM1-203ENST00000490391 NCKAP1LP55160 1127 aa7.52□□□□□ -1.21
PDLIM1-203ENST00000490391 PSMC1P62191 440 aaKnown RBP7.52□□□□□ -1.21
PDLIM1-203ENST00000490391 CAMK2GQ13555 558 aaPredicted RBP7.52□□□□□ -1.21
PDLIM1-203ENST00000490391 ZNF234Q14588 700 aa7.52□□□□□ -1.21
PDLIM1-203ENST00000490391 EFHC2Q5JST6 749 aa7.52□□□□□ -1.21
PDLIM1-203ENST00000490391 SNX30Q5VWJ9 437 aa7.52□□□□□ -1.21
PDLIM1-203ENST00000490391 HAUS3Q68CZ6 603 aa7.52□□□□□ -1.21
PDLIM1-203ENST00000490391 C4orf50Q6ZRC1 276 aa7.52□□□□□ -1.21
PDLIM1-203ENST00000490391 TPGS1Q6ZTW0 290 aa7.52□□□□□ -1.21
PDLIM1-203ENST00000490391 HTR3DQ70Z44 454 aa7.52□□□□□ -1.21
PDLIM1-203ENST00000490391 LIMS2Q7Z4I7 341 aa7.52□□□□□ -1.21
PDLIM1-203ENST00000490391 CLEC14AQ86T13 490 aa7.52□□□□□ -1.21
PDLIM1-203ENST00000490391 OR2T3Q8NH03 318 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms