RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 PDCD11Q14690 1871 aaKnown RBP13.07□□□□□ -0.32
CLIC4-202ENST00000488683 COL1A2P08123 1366 aa13.06□□□□□ -0.32
CLIC4-202ENST00000488683 TPH1P17752 444 aa13.06□□□□□ -0.32
CLIC4-202ENST00000488683 CCR10P46092 362 aa13.06□□□□□ -0.32
CLIC4-202ENST00000488683 KYAT1Q16773 422 aa13.06□□□□□ -0.32
CLIC4-202ENST00000488683 FASTKD5Q7L8L6 764 aaKnown RBP13.06□□□□□ -0.32
CLIC4-202ENST00000488683 DPP9Q86TI2 863 aa13.06□□□□□ -0.32
CLIC4-202ENST00000488683 NT5DC4Q86YG4 428 aa13.06□□□□□ -0.32
CLIC4-202ENST00000488683 RBM15BQ8NDT2 890 aaKnown RBP13.06□□□□□ -0.32
CLIC4-202ENST00000488683 STKLD1Q8NE28 680 aa13.06□□□□□ -0.32
CLIC4-202ENST00000488683 HIPK4Q8NE63 616 aa13.06□□□□□ -0.32
CLIC4-202ENST00000488683 OR6J1Q8NGC5 347 aa13.06□□□□□ -0.32
CLIC4-202ENST00000488683 CENPIQ92674 756 aaPredicted RBP13.06□□□□□ -0.32
CLIC4-202ENST00000488683 PGBD4Q96DM1 585 aa13.06□□□□□ -0.32
CLIC4-202ENST00000488683 KCNK16Q96T55 309 aa13.06□□□□□ -0.32
CLIC4-202ENST00000488683 AGAP2Q99490 1192 aa13.06□□□□□ -0.32
CLIC4-202ENST00000488683 ADAMTS10Q9H324 1103 aa13.06□□□□□ -0.32
CLIC4-202ENST00000488683 MAN1C1Q9NR34 630 aa13.06□□□□□ -0.32
CLIC4-202ENST00000488683 PNPOQ9NVS9 261 aa13.06□□□□□ -0.32
CLIC4-202ENST00000488683 EMCNQ9ULC0 261 aa13.06□□□□□ -0.32
CLIC4-202ENST00000488683 G3BP2Q9UN86 482 aaKnown RBP13.06□□□□□ -0.32
CLIC4-202ENST00000488683 RNF103O00237 685 aa13.06□□□□□ -0.32
CLIC4-202ENST00000488683 CAPN9O14815 690 aa13.06□□□□□ -0.32
CLIC4-202ENST00000488683 TBX10O75333 385 aa13.06□□□□□ -0.32
CLIC4-202ENST00000488683 GCATO75600 419 aa13.06□□□□□ -0.32
CLIC4-202ENST00000488683 TGDSO95455 350 aa13.06□□□□□ -0.32
CLIC4-202ENST00000488683 CCNFP41002 786 aa13.06□□□□□ -0.32
CLIC4-202ENST00000488683 PTPN9P43378 593 aa13.06□□□□□ -0.32
CLIC4-202ENST00000488683 RASSF2P50749 326 aa13.06□□□□□ -0.32
CLIC4-202ENST00000488683 CACNA2D1P54289 1103 aa13.06□□□□□ -0.32
CLIC4-202ENST00000488683 BEX3Q00994 111 aa13.06□□□□□ -0.32
CLIC4-202ENST00000488683 CCDC6Q16204 474 aa13.06□□□□□ -0.32
CLIC4-202ENST00000488683 PAN2Q504Q3 1202 aaKnown RBP13.06□□□□□ -0.32
CLIC4-202ENST00000488683 N4BP2L1Q5TBK1 243 aaPredicted RBP13.06□□□□□ -0.32
CLIC4-202ENST00000488683 ISLR2Q6UXK2 745 aa13.06□□□□□ -0.32
CLIC4-202ENST00000488683 PIGZQ86VD9 579 aa13.06□□□□□ -0.32
CLIC4-202ENST00000488683 MCUQ8NE86 351 aa13.06□□□□□ -0.32
CLIC4-202ENST00000488683 PPP1R14CQ8TAE6 165 aa13.06□□□□□ -0.32
CLIC4-202ENST00000488683 SPDL1Q96EA4 605 aa13.06□□□□□ -0.32
CLIC4-202ENST00000488683 THTPAQ9BU02 230 aa13.06□□□□□ -0.32
CLIC4-202ENST00000488683 TMEM30AQ9NV96 361 aa13.06□□□□□ -0.32
CLIC4-202ENST00000488683 USP3Q9Y6I4 520 aa13.06□□□□□ -0.32
CLIC4-202ENST00000488683 FAM159BA6NKW6 160 aa13.05□□□□□ -0.32
CLIC4-202ENST00000488683 I3L4J1 428 aa13.05□□□□□ -0.32
CLIC4-202ENST00000488683 PDHXO00330 501 aa13.05□□□□□ -0.32
CLIC4-202ENST00000488683 TRDMT1O14717 391 aaKnown RBP13.05□□□□□ -0.32
CLIC4-202ENST00000488683 DNAJC6O75061 913 aa13.05□□□□□ -0.32
CLIC4-202ENST00000488683 NEBLO76041 1014 aa13.05□□□□□ -0.32
CLIC4-202ENST00000488683 GSRP00390 522 aa13.05□□□□□ -0.32
CLIC4-202ENST00000488683 MMP3P08254 477 aa13.05□□□□□ -0.32
CLIC4-202ENST00000488683 MXRA7P84157 204 aa13.05□□□□□ -0.32
CLIC4-202ENST00000488683 SLC25A3Q00325 362 aa13.05□□□□□ -0.32
CLIC4-202ENST00000488683 LRRC36Q1X8D7 754 aa13.05□□□□□ -0.32
CLIC4-202ENST00000488683 TEX44Q53QW1 395 aa13.05□□□□□ -0.32
CLIC4-202ENST00000488683 FASTKD1Q53R41 847 aaKnown RBP13.05□□□□□ -0.32
CLIC4-202ENST00000488683 OTUD1Q5VV17 481 aaPredicted RBP13.05□□□□□ -0.32
CLIC4-202ENST00000488683 KIAA0319Q5VV43 1072 aa13.05□□□□□ -0.32
CLIC4-202ENST00000488683 SLC26A9Q7LBE3 791 aa13.05□□□□□ -0.32
CLIC4-202ENST00000488683 CDKL3Q8IVW4 592 aaPredicted RBP13.05□□□□□ -0.32
CLIC4-202ENST00000488683 TTC39CQ8N584 583 aa13.05□□□□□ -0.32
CLIC4-202ENST00000488683 SHCBP1Q8NEM2 672 aa13.05□□□□□ -0.32
CLIC4-202ENST00000488683 OR52K1Q8NGK4 314 aa13.05□□□□□ -0.32
CLIC4-202ENST00000488683 GSDMBQ8TAX9 411 aa13.05□□□□□ -0.32
CLIC4-202ENST00000488683 HTR3CQ8WXA8 447 aa13.05□□□□□ -0.32
CLIC4-202ENST00000488683 EMID1Q96A84 441 aaPredicted RBP13.05□□□□□ -0.32
CLIC4-202ENST00000488683 P2RY11Q96G91 374 aa13.05□□□□□ -0.32
CLIC4-202ENST00000488683 QKIQ96PU8 341 aaKnown RBP eCLIP13.05□□□□□ -0.322e-10■■■■■ 76.3
CLIC4-202ENST00000488683 VTA1Q9NP79 307 aa13.05□□□□□ -0.32
CLIC4-202ENST00000488683 NMRK1Q9NWW6 199 aa13.05□□□□□ -0.32
CLIC4-202ENST00000488683 MTO1Q9Y2Z2 717 aaKnown RBP13.05□□□□□ -0.32
CLIC4-202ENST00000488683 SMIM28A0A1B0GU29 152 aa13.05□□□□□ -0.32
CLIC4-202ENST00000488683 RBM47A0AV96 593 aaKnown RBP13.05□□□□□ -0.32
CLIC4-202ENST00000488683 NRP1O14786 923 aa13.05□□□□□ -0.32
CLIC4-202ENST00000488683 CCDC22O60826 627 aa13.05□□□□□ -0.32
CLIC4-202ENST00000488683 SETSIPP0DME0 302 aa13.05□□□□□ -0.32
CLIC4-202ENST00000488683 PGM1P36871 562 aa13.05□□□□□ -0.32
CLIC4-202ENST00000488683 MAP3K7CLP57077 242 aa13.05□□□□□ -0.32
CLIC4-202ENST00000488683 IRF9Q00978 393 aa13.05□□□□□ -0.32
CLIC4-202ENST00000488683 PDE1CQ14123 709 aaPredicted RBP13.05□□□□□ -0.32
CLIC4-202ENST00000488683 RALGPS1Q5JS13 557 aa13.05□□□□□ -0.32
CLIC4-202ENST00000488683 ARHGAP17Q68EM7 881 aa13.05□□□□□ -0.32
CLIC4-202ENST00000488683 EP400NLQ6ZTU2 488 aa13.05□□□□□ -0.32
CLIC4-202ENST00000488683 GPRIN1Q7Z2K8 1008 aa13.05□□□□□ -0.32
CLIC4-202ENST00000488683 KDELC2Q7Z4H8 507 aa13.05□□□□□ -0.32
CLIC4-202ENST00000488683 PLD6Q8N2A8 252 aaKnown RBP13.05□□□□□ -0.32
CLIC4-202ENST00000488683 TEX9Q8N6V9 391 aa13.05□□□□□ -0.32
CLIC4-202ENST00000488683 EDEM1Q92611 657 aa13.05□□□□□ -0.32
CLIC4-202ENST00000488683 ATP2A3Q93084 1043 aa13.05□□□□□ -0.32
CLIC4-202ENST00000488683 FCRL3Q96P31 734 aaPredicted RBP13.05□□□□□ -0.32
CLIC4-202ENST00000488683 OSBPL1AQ9BXW6 950 aa13.05□□□□□ -0.32
CLIC4-202ENST00000488683 XPNPEP3Q9NQH7 507 aa13.05□□□□□ -0.32
CLIC4-202ENST00000488683 DNAJC16Q9Y2G8 782 aa13.05□□□□□ -0.32
CLIC4-202ENST00000488683 TTC3P53804 2025 aa13.05□□□□□ -0.32
CLIC4-202ENST00000488683 LOC100653049A0A140TA62 436 aa13.04□□□□□ -0.32
CLIC4-202ENST00000488683 KPNA7A9QM74 516 aa13.04□□□□□ -0.32
CLIC4-202ENST00000488683 M0QYT0 321 aa13.04□□□□□ -0.32
CLIC4-202ENST00000488683 KLF11O14901 512 aa13.04□□□□□ -0.32
CLIC4-202ENST00000488683 TREHO43280 583 aa13.04□□□□□ -0.32
CLIC4-202ENST00000488683 GPR32O75388 356 aa13.04□□□□□ -0.32
CLIC4-202ENST00000488683 KRT34O76011 436 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms