RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 MBPP02686 304 aaPredicted RBP3.71□□□□□ -1.82
CD46-215ENST00000488596 TMIGD3P0DMS9 266 aaPredicted RBP3.71□□□□□ -1.82
CD46-215ENST00000488596 MYCLP12524 364 aaPredicted RBP3.71□□□□□ -1.82
CD46-215ENST00000488596 CCKBRP32239 447 aa3.71□□□□□ -1.82
CD46-215ENST00000488596 DGKQP52824 942 aa3.71□□□□□ -1.82
CD46-215ENST00000488596 PRKAA2P54646 552 aa3.71□□□□□ -1.82
CD46-215ENST00000488596 POLE2P56282 527 aa3.71□□□□□ -1.82
CD46-215ENST00000488596 GPC5P78333 572 aa3.71□□□□□ -1.82
CD46-215ENST00000488596 CUL4BQ13620 913 aa3.71□□□□□ -1.82
CD46-215ENST00000488596 RABEP1Q15276 862 aa3.71□□□□□ -1.82
CD46-215ENST00000488596 ZNF260Q3ZCT1 412 aa3.71□□□□□ -1.82
CD46-215ENST00000488596 RUSC1-AS1Q66K80 236 aa3.71□□□□□ -1.82
CD46-215ENST00000488596 ANKRD40Q6AI12 368 aa3.71□□□□□ -1.82
CD46-215ENST00000488596 TANGO2Q6ICL3 276 aa3.71□□□□□ -1.82
CD46-215ENST00000488596 C16orf89Q6UX73 402 aa3.71□□□□□ -1.82
CD46-215ENST00000488596 CHSY1Q86X52 802 aa3.71□□□□□ -1.82
CD46-215ENST00000488596 CPXCR1Q8N123 301 aa3.71□□□□□ -1.82
CD46-215ENST00000488596 CLASRPQ8N2M8 674 aaKnown RBP3.71□□□□□ -1.82
CD46-215ENST00000488596 C12orf76Q8N812 135 aaPredicted RBP3.71□□□□□ -1.82
CD46-215ENST00000488596 PNPLA1Q8N8W4 532 aa3.71□□□□□ -1.82
CD46-215ENST00000488596 TERB1Q8NA31 727 aa3.71□□□□□ -1.82
CD46-215ENST00000488596 HMGB4Q8WW32 186 aa3.71□□□□□ -1.82
CD46-215ENST00000488596 C3orf49Q96BT1 292 aa3.71□□□□□ -1.82
CD46-215ENST00000488596 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.71□□□□□ -1.82
CD46-215ENST00000488596 CCDC134Q9H6E4 229 aa3.71□□□□□ -1.82
CD46-215ENST00000488596 ELAC1Q9H777 363 aaKnown RBP3.71□□□□□ -1.82
CD46-215ENST00000488596 PRDM8Q9NQV8 689 aa3.71□□□□□ -1.82
CD46-215ENST00000488596 RAB21Q9UL25 225 aa3.71□□□□□ -1.82
CD46-215ENST00000488596 CNTN6Q9UQ52 1028 aa3.71□□□□□ -1.82
CD46-215ENST00000488596 DGKBQ9Y6T7 804 aa3.71□□□□□ -1.82
CD46-215ENST00000488596 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.7□□□□□ -1.82
CD46-215ENST00000488596 FYB1O15117 783 aa3.7□□□□□ -1.82
CD46-215ENST00000488596 KRT38O76015 456 aa3.7□□□□□ -1.82
CD46-215ENST00000488596 CBSLP0DN79 551 aa3.7□□□□□ -1.82
CD46-215ENST00000488596 APEHP13798 732 aaKnown RBP3.7□□□□□ -1.82
CD46-215ENST00000488596 GALNSP34059 522 aa3.7□□□□□ -1.82
CD46-215ENST00000488596 THBS4P35443 961 aa3.7□□□□□ -1.82
CD46-215ENST00000488596 CBSP35520 551 aa3.7□□□□□ -1.82
CD46-215ENST00000488596 IGHMBP2P38935 993 aaKnown RBP3.7□□□□□ -1.82
CD46-215ENST00000488596 ARHGAP25P42331 645 aa3.7□□□□□ -1.82
CD46-215ENST00000488596 MMP13P45452 471 aa3.7□□□□□ -1.82
CD46-215ENST00000488596 TXNL4AP83876 142 aaKnown RBP3.7□□□□□ -1.82
CD46-215ENST00000488596 CCDC15Q0P6D6 951 aa3.7□□□□□ -1.82
CD46-215ENST00000488596 SF3A3Q12874 501 aaKnown RBP eCLIP3.7□□□□□ -1.828e-13■■■■□ 21.3
CD46-215ENST00000488596 BIRC3Q13489 604 aa3.7□□□□□ -1.82
CD46-215ENST00000488596 DAZAP2Q15038 168 aaPredicted RBP3.7□□□□□ -1.82
CD46-215ENST00000488596 RPS6KA2Q15349 733 aa3.7□□□□□ -1.82
CD46-215ENST00000488596 TMEM95Q3KNT9 176 aa3.7□□□□□ -1.82
CD46-215ENST00000488596 ZNF569Q5MCW4 686 aa3.7□□□□□ -1.82
CD46-215ENST00000488596 MTHFD1LQ6UB35 978 aa3.7□□□□□ -1.82
CD46-215ENST00000488596 BCDIN3DQ7Z5W3 292 aaKnown RBP3.7□□□□□ -1.82
CD46-215ENST00000488596 TRABD2AQ86V40 505 aa3.7□□□□□ -1.82
CD46-215ENST00000488596 SFTPA1Q8IWL2 248 aa3.7□□□□□ -1.82
CD46-215ENST00000488596 SMAP1Q8IYB5 467 aaPredicted RBP3.7□□□□□ -1.82
CD46-215ENST00000488596 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.7□□□□□ -1.82
CD46-215ENST00000488596 NGDNQ8NEJ9 315 aaKnown RBP3.7□□□□□ -1.82
CD46-215ENST00000488596 OVCA2Q8WZ82 227 aa3.7□□□□□ -1.82
CD46-215ENST00000488596 EDC3Q96F86 508 aaKnown RBP3.7□□□□□ -1.82
CD46-215ENST00000488596 REXO5Q96IC2 774 aaKnown RBP3.7□□□□□ -1.82
CD46-215ENST00000488596 C5orf34Q96MH7 638 aa3.7□□□□□ -1.82
CD46-215ENST00000488596 MMS19Q96T76 1030 aa3.7□□□□□ -1.82
CD46-215ENST00000488596 ISCA1Q9BUE6 129 aa3.7□□□□□ -1.82
CD46-215ENST00000488596 DDX23Q9BUQ8 820 aaKnown RBP3.7□□□□□ -1.82
CD46-215ENST00000488596 PDGFCQ9NRA1 345 aa3.7□□□□□ -1.82
CD46-215ENST00000488596 SNX15Q9NRS6 342 aa3.7□□□□□ -1.82
CD46-215ENST00000488596 FBXO28Q9NVF7 368 aa3.7□□□□□ -1.82
CD46-215ENST00000488596 ASIC5Q9NY37 505 aa3.7□□□□□ -1.82
CD46-215ENST00000488596 TUBA8Q9NY65 449 aaPredicted RBP3.7□□□□□ -1.82
CD46-215ENST00000488596 KIF17Q9P2E2 1029 aa3.7□□□□□ -1.82
CD46-215ENST00000488596 KCND3Q9UK17 655 aa3.7□□□□□ -1.82
CD46-215ENST00000488596 ZNF580Q9UK33 172 aa3.7□□□□□ -1.82
CD46-215ENST00000488596 CACNA1IQ9P0X4 2223 aa3.69□□□□□ -1.82
CD46-215ENST00000488596 CYP2D7A0A087X1C5 515 aa3.69□□□□□ -1.82
CD46-215ENST00000488596 LOC105369274A0A096LPK9 316 aa3.69□□□□□ -1.82
CD46-215ENST00000488596 LOC102723532A0A0G2JNH3 316 aa3.69□□□□□ -1.82
CD46-215ENST00000488596 CCDC189A1A4V9 331 aa3.69□□□□□ -1.82
CD46-215ENST00000488596 H0Y3Z8 333 aa3.69□□□□□ -1.82
CD46-215ENST00000488596 CLIC1O00299 241 aa3.69□□□□□ -1.82
CD46-215ENST00000488596 FAM155BO75949 473 aa3.69□□□□□ -1.82
CD46-215ENST00000488596 MMP8P22894 467 aa3.69□□□□□ -1.82
CD46-215ENST00000488596 CST5P28325 142 aaPredicted RBP3.69□□□□□ -1.82
CD46-215ENST00000488596 TKTP29401 623 aaKnown RBP3.69□□□□□ -1.82
CD46-215ENST00000488596 POLGP54098 1239 aaPredicted RBP3.69□□□□□ -1.82
CD46-215ENST00000488596 ARL4CP56559 192 aa3.69□□□□□ -1.82
CD46-215ENST00000488596 FAM3BP58499 235 aaPredicted RBP3.69□□□□□ -1.82
CD46-215ENST00000488596 RAE1P78406 368 aaKnown RBP3.69□□□□□ -1.82
CD46-215ENST00000488596 HOXA4Q00056 320 aaPredicted RBP3.69□□□□□ -1.82
CD46-215ENST00000488596 RNASELQ05823 741 aaKnown RBP3.69□□□□□ -1.82
CD46-215ENST00000488596 PPFIA1Q13136 1202 aa3.69□□□□□ -1.82
CD46-215ENST00000488596 GAB1Q13480 694 aa3.69□□□□□ -1.82
CD46-215ENST00000488596 LAMB3Q13751 1172 aa3.69□□□□□ -1.82
CD46-215ENST00000488596 RAPGEF1Q13905 1077 aa3.69□□□□□ -1.82
CD46-215ENST00000488596 AAK1Q2M2I8 961 aa3.69□□□□□ -1.82
CD46-215ENST00000488596 TRIM60Q495X7 471 aa3.69□□□□□ -1.82
CD46-215ENST00000488596 GALNTL6Q49A17 601 aa3.69□□□□□ -1.82
CD46-215ENST00000488596 C4orf46Q504U0 113 aa3.69□□□□□ -1.82
CD46-215ENST00000488596 AWAT1Q58HT5 328 aa3.69□□□□□ -1.82
CD46-215ENST00000488596 ACSM6Q6P461 480 aa3.69□□□□□ -1.82
CD46-215ENST00000488596 NFRKBQ6P4R8 1299 aa3.69□□□□□ -1.82
CD46-215ENST00000488596 FTSJ3Q8IY81 847 aaKnown RBP3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms