RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.04□□□□□ -1.76
SNRNP27-204ENST00000487029 NGDNQ8NEJ9 315 aaKnown RBP4.04□□□□□ -1.76
SNRNP27-204ENST00000487029 OR6Y1Q8NGX8 325 aa4.04□□□□□ -1.76
SNRNP27-204ENST00000487029 OVCA2Q8WZ82 227 aa4.04□□□□□ -1.76
SNRNP27-204ENST00000487029 CTHRC1Q96CG8 243 aa4.04□□□□□ -1.76
SNRNP27-204ENST00000487029 VPS50Q96JG6 964 aa4.04□□□□□ -1.76
SNRNP27-204ENST00000487029 TRAPPC9Q96Q05 1148 aa4.04□□□□□ -1.76
SNRNP27-204ENST00000487029 EIF3CQ99613 913 aaKnown RBP4.04□□□□□ -1.76
SNRNP27-204ENST00000487029 SEPSECSQ9HD40 501 aaKnown RBP4.04□□□□□ -1.76
SNRNP27-204ENST00000487029 RXFP3Q9NSD7 469 aa4.04□□□□□ -1.76
SNRNP27-204ENST00000487029 TUBA8Q9NY65 449 aaPredicted RBP4.04□□□□□ -1.76
SNRNP27-204ENST00000487029 RRN3Q9NYV6 651 aa4.04□□□□□ -1.76
SNRNP27-204ENST00000487029 DAPP1Q9UN19 280 aa4.04□□□□□ -1.76
SNRNP27-204ENST00000487029 C19orf53Q9UNZ5 99 aaPredicted RBP4.04□□□□□ -1.76
SNRNP27-204ENST00000487029 CNTN6Q9UQ52 1028 aa4.04□□□□□ -1.76
SNRNP27-204ENST00000487029 GXYLT2A0PJZ3 443 aa4.03□□□□□ -1.76
SNRNP27-204ENST00000487029 H0Y3Z8 333 aa4.03□□□□□ -1.76
SNRNP27-204ENST00000487029 AP4M1O00189 453 aa4.03□□□□□ -1.76
SNRNP27-204ENST00000487029 EIF3FO00303 357 aaPredicted RBP4.03□□□□□ -1.76
SNRNP27-204ENST00000487029 CES2O00748 559 aa4.03□□□□□ -1.76
SNRNP27-204ENST00000487029 CTIFO43310 598 aaKnown RBP4.03□□□□□ -1.76
SNRNP27-204ENST00000487029 TMPRSS11DO60235 418 aa4.03□□□□□ -1.76
SNRNP27-204ENST00000487029 CER1O95813 267 aa4.03□□□□□ -1.76
SNRNP27-204ENST00000487029 ADRA1DP25100 572 aa4.03□□□□□ -1.76
SNRNP27-204ENST00000487029 MCM5P33992 734 aa4.03□□□□□ -1.76
SNRNP27-204ENST00000487029 ARHGAP25P42331 645 aa4.03□□□□□ -1.76
SNRNP27-204ENST00000487029 CDK7P50613 346 aa4.03□□□□□ -1.76
SNRNP27-204ENST00000487029 PRKAA2P54646 552 aa4.03□□□□□ -1.76
SNRNP27-204ENST00000487029 SEMA3BQ13214 749 aa4.03□□□□□ -1.76
SNRNP27-204ENST00000487029 BFSP2Q13515 415 aa4.03□□□□□ -1.76
SNRNP27-204ENST00000487029 TAF12Q16514 161 aa4.03□□□□□ -1.76
SNRNP27-204ENST00000487029 TBC1D25Q3MII6 688 aa4.03□□□□□ -1.76
SNRNP27-204ENST00000487029 TTC22Q5TAA0 569 aa4.03□□□□□ -1.76
SNRNP27-204ENST00000487029 ANKRD45Q5TZF3 282 aa4.03□□□□□ -1.76
SNRNP27-204ENST00000487029 FAM90A2PQ658T7 463 aa4.03□□□□□ -1.76
SNRNP27-204ENST00000487029 DENND2CQ68D51 928 aa4.03□□□□□ -1.76
SNRNP27-204ENST00000487029 GRHL2Q6ISB3 625 aa4.03□□□□□ -1.76
SNRNP27-204ENST00000487029 CCDC144NLQ6NUI1 221 aa4.03□□□□□ -1.76
SNRNP27-204ENST00000487029 ANKRD16Q6P6B7 361 aa4.03□□□□□ -1.76
SNRNP27-204ENST00000487029 MTHFD1LQ6UB35 978 aa4.03□□□□□ -1.76
SNRNP27-204ENST00000487029 RINLQ6ZS11 566 aa4.03□□□□□ -1.76
SNRNP27-204ENST00000487029 PTCHD4Q6ZW05 846 aa4.03□□□□□ -1.76
SNRNP27-204ENST00000487029 P3H2Q8IVL5 708 aa4.03□□□□□ -1.76
SNRNP27-204ENST00000487029 FTSJ3Q8IY81 847 aaKnown RBP4.03□□□□□ -1.76
SNRNP27-204ENST00000487029 CPT1BQ92523 772 aa4.03□□□□□ -1.76
SNRNP27-204ENST00000487029 C3orf49Q96BT1 292 aa4.03□□□□□ -1.76
SNRNP27-204ENST00000487029 SDCCAG3Q96C92 435 aa4.03□□□□□ -1.76
SNRNP27-204ENST00000487029 UBXN10Q96LJ8 280 aa4.03□□□□□ -1.76
SNRNP27-204ENST00000487029 PAAF1Q9BRP4 392 aa4.03□□□□□ -1.76
SNRNP27-204ENST00000487029 BRD8Q9H0E9 1235 aa4.03□□□□□ -1.76
SNRNP27-204ENST00000487029 TAF1DQ9H5J8 278 aaPredicted RBP4.03□□□□□ -1.76
SNRNP27-204ENST00000487029 ELAC1Q9H777 363 aaKnown RBP4.03□□□□□ -1.76
SNRNP27-204ENST00000487029 SNX15Q9NRS6 342 aa4.03□□□□□ -1.76
SNRNP27-204ENST00000487029 DUSP22Q9NRW4 184 aa4.03□□□□□ -1.76
SNRNP27-204ENST00000487029 DLL3Q9NYJ7 618 aa4.03□□□□□ -1.76
SNRNP27-204ENST00000487029 C9orf78Q9NZ63 289 aaPredicted RBP4.03□□□□□ -1.76
SNRNP27-204ENST00000487029 PGAP2Q9UHJ9 254 aa4.03□□□□□ -1.76
SNRNP27-204ENST00000487029 AMFRQ9UKV5 643 aa4.03□□□□□ -1.76
SNRNP27-204ENST00000487029 AFG3L2Q9Y4W6 797 aa4.03□□□□□ -1.76
SNRNP27-204ENST00000487029 LRRFIP2Q9Y608 721 aaKnown RBP4.03□□□□□ -1.76
SNRNP27-204ENST00000487029 KIF28PB7ZC32 967 aa4.02□□□□□ -1.77
SNRNP27-204ENST00000487029 B9A039 149 aa4.02□□□□□ -1.77
SNRNP27-204ENST00000487029 NCAM2O15394 837 aa4.02□□□□□ -1.77
SNRNP27-204ENST00000487029 JTBO76095 146 aa4.02□□□□□ -1.77
SNRNP27-204ENST00000487029 LARGE1O95461 756 aa4.02□□□□□ -1.77
SNRNP27-204ENST00000487029 NPSP0C0P6 89 aa4.02□□□□□ -1.77
SNRNP27-204ENST00000487029 NDUFB7P17568 137 aa4.02□□□□□ -1.77
SNRNP27-204ENST00000487029 MMP8P22894 467 aa4.02□□□□□ -1.77
SNRNP27-204ENST00000487029 CYP2C18P33260 490 aa4.02□□□□□ -1.77
SNRNP27-204ENST00000487029 AARSP49588 968 aaKnown RBP eCLIP4.02□□□□□ -1.77
SNRNP27-204ENST00000487029 PAPOLAP51003 745 aaKnown RBP4.02□□□□□ -1.77
SNRNP27-204ENST00000487029 SF3A3Q12874 501 aaKnown RBP eCLIP4.02□□□□□ -1.77
SNRNP27-204ENST00000487029 CUL4BQ13620 913 aa4.02□□□□□ -1.77
SNRNP27-204ENST00000487029 EFR3AQ14156 821 aa4.02□□□□□ -1.77
SNRNP27-204ENST00000487029 DAZAP2Q15038 168 aaPredicted RBP4.02□□□□□ -1.77
SNRNP27-204ENST00000487029 RPS6KA2Q15349 733 aa4.02□□□□□ -1.77
SNRNP27-204ENST00000487029 CEP85Q6P2H3 762 aa4.02□□□□□ -1.77
SNRNP27-204ENST00000487029 RRAGAQ7L523 313 aa4.02□□□□□ -1.77
SNRNP27-204ENST00000487029 KRT27Q7Z3Y8 459 aa4.02□□□□□ -1.77
SNRNP27-204ENST00000487029 IRF2BP2Q7Z5L9 587 aa4.02□□□□□ -1.77
SNRNP27-204ENST00000487029 C2CD5Q86YS7 1000 aa4.02□□□□□ -1.77
SNRNP27-204ENST00000487029 PNPLA1Q8N8W4 532 aa4.02□□□□□ -1.77
SNRNP27-204ENST00000487029 NRACQ8N912 160 aa4.02□□□□□ -1.77
SNRNP27-204ENST00000487029 ABHD11Q8NFV4 315 aa4.02□□□□□ -1.77
SNRNP27-204ENST00000487029 SLC22A17Q8WUG5 538 aa4.02□□□□□ -1.77
SNRNP27-204ENST00000487029 AFG1LQ8WV93 481 aa4.02□□□□□ -1.77
SNRNP27-204ENST00000487029 HMGB4Q8WW32 186 aa4.02□□□□□ -1.77
SNRNP27-204ENST00000487029 USP13Q92995 863 aaPredicted RBP4.02□□□□□ -1.77
SNRNP27-204ENST00000487029 RILPL2Q969X0 211 aa4.02□□□□□ -1.77
SNRNP27-204ENST00000487029 TBATAQ96M53 351 aa4.02□□□□□ -1.77
SNRNP27-204ENST00000487029 NAP1L4Q99733 375 aaKnown RBP4.02□□□□□ -1.77
SNRNP27-204ENST00000487029 PYM1Q9BRP8 204 aaKnown RBP4.02□□□□□ -1.77
SNRNP27-204ENST00000487029 FSD1LQ9BXM9 530 aa4.02□□□□□ -1.77
SNRNP27-204ENST00000487029 FBXO28Q9NVF7 368 aa4.02□□□□□ -1.77
SNRNP27-204ENST00000487029 NDUFAF4Q9P032 175 aa4.02□□□□□ -1.77
SNRNP27-204ENST00000487029 MGAT4CQ9UBM8 478 aa4.02□□□□□ -1.77
SNRNP27-204ENST00000487029 FEM1BQ9UK73 627 aa4.02□□□□□ -1.77
SNRNP27-204ENST00000487029 UBE2J1Q9Y385 318 aaPredicted RBP4.02□□□□□ -1.77
SNRNP27-204ENST00000487029 LOC105369274A0A096LPK9 316 aa4.01□□□□□ -1.77
SNRNP27-204ENST00000487029 LOC102723532A0A0G2JNH3 316 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms