RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, human

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGN1-215	ENST00000485550	GSDMA	Q96QA5	445 aa		11.07	□□□□□ -0.64
HMGN1-215	ENST00000485550	UBL7	Q96S82	380 aa	Predicted RBP	11.07	□□□□□ -0.64
HMGN1-215	ENST00000485550	PRDM16	Q9HAZ2	1276 aa		11.07	□□□□□ -0.64
HMGN1-215	ENST00000485550	IL21R	Q9HBE5	538 aa		11.07	□□□□□ -0.64
HMGN1-215	ENST00000485550	MARCH2	Q9P0N8	246 aa		11.07	□□□□□ -0.64
HMGN1-215	ENST00000485550	ARMCX3	Q9UH62	379 aa	Predicted RBP	11.07	□□□□□ -0.64
HMGN1-215	ENST00000485550	TSPAN16	Q9UKR8	245 aa		11.07	□□□□□ -0.64
HMGN1-215	ENST00000485550	AGO1	Q9UL18	857 aa	Known RBP	11.07	□□□□□ -0.64
HMGN1-215	ENST00000485550	CLEC4E	Q9ULY5	219 aa		11.07	□□□□□ -0.64
HMGN1-215	ENST00000485550	COL6A6	A6NMZ7	2263 aa		11.07	□□□□□ -0.64
HMGN1-215	ENST00000485550	ZNF462	Q96JM2	2506 aa		11.06	□□□□□ -0.64
HMGN1-215	ENST00000485550	FAM149A	A5PLN7	773 aa		11.06	□□□□□ -0.64
HMGN1-215	ENST00000485550	PIK3R2	O00459	728 aa		11.06	□□□□□ -0.64
HMGN1-215	ENST00000485550	SLC16A3	O15427	465 aa	Known RBP	11.06	□□□□□ -0.64
HMGN1-215	ENST00000485550	TSPAN3	O60637	253 aa		11.06	□□□□□ -0.64
HMGN1-215	ENST00000485550	ZBED1	O96006	694 aa		11.06	□□□□□ -0.64
HMGN1-215	ENST00000485550	CALCA	P01258	141 aa		11.06	□□□□□ -0.64
HMGN1-215	ENST00000485550	ATXN1L	P0C7T5	689 aa	Known RBP	11.06	□□□□□ -0.64
HMGN1-215	ENST00000485550	GNS	P15586	552 aa		11.06	□□□□□ -0.64
HMGN1-215	ENST00000485550	CHKA	P35790	457 aa		11.06	□□□□□ -0.64
HMGN1-215	ENST00000485550	GEN1	Q17RS7	908 aa		11.06	□□□□□ -0.64
HMGN1-215	ENST00000485550	SGO2	Q562F6	1265 aa		11.06	□□□□□ -0.64
HMGN1-215	ENST00000485550	FYB2	Q5VWT5	728 aa		11.06	□□□□□ -0.64
HMGN1-215	ENST00000485550	GLRX5	Q86SX6	157 aa		11.06	□□□□□ -0.64
HMGN1-215	ENST00000485550	ARHGAP18	Q8N392	663 aa		11.06	□□□□□ -0.64
HMGN1-215	ENST00000485550	ZNF276	Q8N554	614 aa		11.06	□□□□□ -0.64
HMGN1-215	ENST00000485550	EDEM1	Q92611	657 aa		11.06	□□□□□ -0.64
HMGN1-215	ENST00000485550	SLC35C1	Q96A29	364 aa		11.06	□□□□□ -0.64
HMGN1-215	ENST00000485550	ZNF419	Q96HQ0	510 aa	Predicted RBP	11.06	□□□□□ -0.64
HMGN1-215	ENST00000485550	FAXDC2	Q96IV6	333 aa		11.06	□□□□□ -0.64
HMGN1-215	ENST00000485550	CDK5RAP1	Q96SZ6	601 aa	Known RBP	11.06	□□□□□ -0.64
HMGN1-215	ENST00000485550	GABRG3	Q99928	467 aa		11.06	□□□□□ -0.64
HMGN1-215	ENST00000485550	UBXN6	Q9BZV1	441 aa		11.06	□□□□□ -0.64
HMGN1-215	ENST00000485550	DCLK3	Q9C098	648 aa		11.06	□□□□□ -0.64
HMGN1-215	ENST00000485550	FAM124B	Q9H5Z6	455 aa	Predicted RBP	11.06	□□□□□ -0.64
HMGN1-215	ENST00000485550	LRRC4	Q9HBW1	653 aa		11.06	□□□□□ -0.64
HMGN1-215	ENST00000485550	TOR4A	Q9NXH8	423 aa		11.06	□□□□□ -0.64
HMGN1-215	ENST00000485550	KIAA1522	Q9P206	1035 aa	Predicted RBP	11.06	□□□□□ -0.64
HMGN1-215	ENST00000485550	DKK4	Q9UBT3	224 aa		11.06	□□□□□ -0.64
HMGN1-215	ENST00000485550	HESX1	Q9UBX0	185 aa		11.06	□□□□□ -0.64
HMGN1-215	ENST00000485550	SUSD2	Q9UGT4	822 aa		11.06	□□□□□ -0.64
HMGN1-215	ENST00000485550	SFMBT1	Q9UHJ3	866 aa		11.06	□□□□□ -0.64
HMGN1-215	ENST00000485550	FBXO10	Q9UK96	956 aa		11.06	□□□□□ -0.64
HMGN1-215	ENST00000485550	STRIP2	Q9ULQ0	834 aa		11.06	□□□□□ -0.64
HMGN1-215	ENST00000485550	ZNF510	Q9Y2H8	683 aa		11.06	□□□□□ -0.64
HMGN1-215	ENST00000485550	COQ4	Q9Y3A0	265 aa		11.06	□□□□□ -0.64
HMGN1-215	ENST00000485550	TENM4	Q6N022	2769 aa		11.06	□□□□□ -0.64
HMGN1-215	ENST00000485550	CKAP5	Q14008	2032 aa		11.06	□□□□□ -0.64
HMGN1-215	ENST00000485550		A0A087WV48	116 aa		11.05	□□□□□ -0.64
HMGN1-215	ENST00000485550	XPO1	O14980	1071 aa	Known RBP	11.05	□□□□□ -0.64
HMGN1-215	ENST00000485550	ZNF217	O75362	1048 aa		11.05	□□□□□ -0.64
HMGN1-215	ENST00000485550	PENK	P01210	267 aa	Predicted RBP	11.05	□□□□□ -0.64
HMGN1-215	ENST00000485550	CYBB	P04839	570 aa		11.05	□□□□□ -0.64
HMGN1-215	ENST00000485550	LCP1	P13796	627 aa		11.05	□□□□□ -0.64
HMGN1-215	ENST00000485550	PLA2G2A	P14555	144 aa		11.05	□□□□□ -0.64
HMGN1-215	ENST00000485550	ABCG1	P45844	678 aa		11.05	□□□□□ -0.64
HMGN1-215	ENST00000485550	RGS7	P49802	495 aa		11.05	□□□□□ -0.64
HMGN1-215	ENST00000485550	MFAP3	P55082	362 aa		11.05	□□□□□ -0.64
HMGN1-215	ENST00000485550	LRRC63	Q05C16	580 aa		11.05	□□□□□ -0.64
HMGN1-215	ENST00000485550	ADIG	Q0VDE8	80 aa		11.05	□□□□□ -0.64
HMGN1-215	ENST00000485550	BECN1	Q14457	450 aa		11.05	□□□□□ -0.64
HMGN1-215	ENST00000485550	CCDC40	Q4G0X9	1142 aa		11.05	□□□□□ -0.64
HMGN1-215	ENST00000485550	COBLL1	Q53SF7	1204 aa		11.05	□□□□□ -0.64
HMGN1-215	ENST00000485550	SYCP2L	Q5T4T6	812 aa		11.05	□□□□□ -0.64
HMGN1-215	ENST00000485550	KLHL10	Q6JEL2	608 aa		11.05	□□□□□ -0.64
HMGN1-215	ENST00000485550	ADGRD1	Q6QNK2	874 aa		11.05	□□□□□ -0.64
HMGN1-215	ENST00000485550	KIAA1324	Q6UXG2	1013 aa	Known RBP	11.05	□□□□□ -0.64
HMGN1-215	ENST00000485550	FMNL3	Q8IVF7	1028 aa		11.05	□□□□□ -0.64
HMGN1-215	ENST00000485550	SCUBE3	Q8IX30	993 aa		11.05	□□□□□ -0.64
HMGN1-215	ENST00000485550	ZC3H3	Q8IXZ2	948 aa	Known RBP	11.05	□□□□□ -0.64
HMGN1-215	ENST00000485550	ZCCHC9	Q8N567	271 aa	Known RBP	11.05	□□□□□ -0.64
HMGN1-215	ENST00000485550	SPATA20	Q8TB22	786 aa		11.05	□□□□□ -0.64
HMGN1-215	ENST00000485550	DDI1	Q8WTU0	396 aa		11.05	□□□□□ -0.64
HMGN1-215	ENST00000485550	RNF139	Q8WU17	664 aa		11.05	□□□□□ -0.64
HMGN1-215	ENST00000485550	KAT5	Q92993	513 aa		11.05	□□□□□ -0.64
HMGN1-215	ENST00000485550	IPO9	Q96P70	1041 aa	Known RBP	11.05	□□□□□ -0.64
HMGN1-215	ENST00000485550	MIR1-1HG	Q9H1L0	117 aa		11.05	□□□□□ -0.64
HMGN1-215	ENST00000485550	GAREM1	Q9H706	876 aa		11.05	□□□□□ -0.64
HMGN1-215	ENST00000485550	CD248	Q9HCU0	757 aa		11.05	□□□□□ -0.64
HMGN1-215	ENST00000485550	TM7SF3	Q9NS93	570 aa		11.05	□□□□□ -0.64
HMGN1-215	ENST00000485550	MAN1B1	Q9UKM7	699 aa		11.05	□□□□□ -0.64
HMGN1-215	ENST00000485550	PCDHB4	Q9Y5E5	795 aa		11.05	□□□□□ -0.64
HMGN1-215	ENST00000485550	STON1	Q9Y6Q2	735 aa		11.05	□□□□□ -0.64
HMGN1-215	ENST00000485550		A0A1B0GTW7	788 aa		11.04	□□□□□ -0.64
HMGN1-215	ENST00000485550	YJEFN3	A6XGL0	299 aa		11.04	□□□□□ -0.64
HMGN1-215	ENST00000485550	MEI4	A8MW99	385 aa		11.04	□□□□□ -0.64
HMGN1-215	ENST00000485550		E7ENQ6	273 aa		11.04	□□□□□ -0.64
HMGN1-215	ENST00000485550	RNF225	M0QZC1	329 aa	Predicted RBP	11.04	□□□□□ -0.64
HMGN1-215	ENST00000485550		O00370	1275 aa		11.04	□□□□□ -0.64
HMGN1-215	ENST00000485550	PSMA7	O14818	248 aa		11.04	□□□□□ -0.64
HMGN1-215	ENST00000485550	VDR	P11473	427 aa		11.04	□□□□□ -0.64
HMGN1-215	ENST00000485550	ITPKB	P27987	946 aa		11.04	□□□□□ -0.64
HMGN1-215	ENST00000485550	IL12RB1	P42701	662 aa		11.04	□□□□□ -0.64
HMGN1-215	ENST00000485550	FMO5	P49326	533 aa		11.04	□□□□□ -0.64
HMGN1-215	ENST00000485550	BCAT1	P54687	386 aa		11.04	□□□□□ -0.64
HMGN1-215	ENST00000485550	STX17	P56962	302 aa		11.04	□□□□□ -0.64
HMGN1-215	ENST00000485550	YWHAE	P62258	255 aa	Known RBP	11.04	□□□□□ -0.64
HMGN1-215	ENST00000485550	NUCB2	P80303	420 aa		11.04	□□□□□ -0.64
HMGN1-215	ENST00000485550	BST2	Q10589	180 aa	Known RBP	11.04	□□□□□ -0.64
HMGN1-215	ENST00000485550	CAMK2B	Q13554	666 aa		11.04	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms