RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 IFI16Q16666 785 aaKnown RBP11.21□□□□□ -0.62
DDX56-212ENST00000485367 GKAP1Q5VSY0 366 aaPredicted RBP11.21□□□□□ -0.62
DDX56-212ENST00000485367 KRT39Q6A163 491 aa11.21□□□□□ -0.62
DDX56-212ENST00000485367 CRYBG2Q8N1P7 616 aa11.21□□□□□ -0.62
DDX56-212ENST00000485367 SPEM1Q8N4L4 309 aa11.21□□□□□ -0.62
DDX56-212ENST00000485367 CPA6Q8N4T0 437 aa11.21□□□□□ -0.62
DDX56-212ENST00000485367 C12orf29Q8N999 325 aa11.21□□□□□ -0.62
DDX56-212ENST00000485367 SCAMP5Q8TAC9 235 aa11.21□□□□□ -0.62
DDX56-212ENST00000485367 CCHCR1Q8TD31 782 aa11.21□□□□□ -0.62
DDX56-212ENST00000485367 OSCP1Q8WVF1 389 aa11.21□□□□□ -0.62
DDX56-212ENST00000485367 FBXO32Q969P5 355 aa11.21□□□□□ -0.62
DDX56-212ENST00000485367 NIF3L1Q9GZT8 377 aa11.21□□□□□ -0.62
DDX56-212ENST00000485367 RNF38Q9H0F5 515 aa11.21□□□□□ -0.62
DDX56-212ENST00000485367 CYP3A43Q9HB55 503 aa11.21□□□□□ -0.62
DDX56-212ENST00000485367 BATF3Q9NR55 127 aa11.21□□□□□ -0.62
DDX56-212ENST00000485367 SMPD4Q9NXE4 827 aa11.21□□□□□ -0.62
DDX56-212ENST00000485367 CHORDC1Q9UHD1 332 aaPredicted RBP11.21□□□□□ -0.62
DDX56-212ENST00000485367 PCDHGA2Q9Y5H1 932 aa11.21□□□□□ -0.62
DDX56-212ENST00000485367 ZNF292O60281 2723 aa11.2□□□□□ -0.62
DDX56-212ENST00000485367 CCDC188H7C350 402 aa11.2□□□□□ -0.62
DDX56-212ENST00000485367 LEFTY2O00292 366 aa11.2□□□□□ -0.62
DDX56-212ENST00000485367 ADORA2BP29275 332 aa11.2□□□□□ -0.62
DDX56-212ENST00000485367 MXI1P50539 228 aa11.2□□□□□ -0.62
DDX56-212ENST00000485367 GRSF1Q12849 480 aaKnown RBP eCLIP11.2□□□□□ -0.62
DDX56-212ENST00000485367 TCERG1LQ5VWI1 586 aa11.2□□□□□ -0.62
DDX56-212ENST00000485367 MAMSTRQ6ZN01 415 aa11.2□□□□□ -0.62
DDX56-212ENST00000485367 RRAGAQ7L523 313 aa11.2□□□□□ -0.62
DDX56-212ENST00000485367 CACNA2D4Q7Z3S7 1137 aa11.2□□□□□ -0.62
DDX56-212ENST00000485367 SEMA4DQ92854 862 aa11.2□□□□□ -0.62
DDX56-212ENST00000485367 TATDN2Q93075 761 aa11.2□□□□□ -0.62
DDX56-212ENST00000485367 ATP2A3Q93084 1043 aa11.2□□□□□ -0.62
DDX56-212ENST00000485367 SEC16BQ96JE7 1060 aa11.2□□□□□ -0.62
DDX56-212ENST00000485367 TWNKQ96RR1 684 aa11.2□□□□□ -0.62
DDX56-212ENST00000485367 KRT12Q99456 494 aa11.2□□□□□ -0.62
DDX56-212ENST00000485367 SMOQ99835 787 aa11.2□□□□□ -0.62
DDX56-212ENST00000485367 LINC00597Q9H2U6 94 aa11.2□□□□□ -0.62
DDX56-212ENST00000485367 ECT2Q9H8V3 914 aa11.2□□□□□ -0.62
DDX56-212ENST00000485367 NFS1Q9Y697 457 aa11.2□□□□□ -0.62
DDX56-212ENST00000485367 SPTBN4Q9H254 2564 aa11.2□□□□□ -0.62
DDX56-212ENST00000485367 TNFRSF10BO14763 440 aa11.19□□□□□ -0.62
DDX56-212ENST00000485367 BEST1O76090 585 aa11.19□□□□□ -0.62
DDX56-212ENST00000485367 MBL2P11226 248 aaPredicted RBP11.19□□□□□ -0.62
DDX56-212ENST00000485367 GJA4P35212 333 aa11.19□□□□□ -0.62
DDX56-212ENST00000485367 HSD17B3P37058 310 aa11.19□□□□□ -0.62
DDX56-212ENST00000485367 SCTRP47872 440 aa11.19□□□□□ -0.62
DDX56-212ENST00000485367 SLC5A3P53794 718 aa11.19□□□□□ -0.62
DDX56-212ENST00000485367 NRLP54845 237 aa11.19□□□□□ -0.62
DDX56-212ENST00000485367 EIF3BP55884 814 aaKnown RBP11.19□□□□□ -0.62
DDX56-212ENST00000485367 MAP3K7CLP57077 242 aa11.19□□□□□ -0.62
DDX56-212ENST00000485367 SLC7A9P82251 487 aa11.19□□□□□ -0.62
DDX56-212ENST00000485367 FKBP3Q00688 224 aaKnown RBP11.19□□□□□ -0.62
DDX56-212ENST00000485367 INCA1Q0VD86 236 aa11.19□□□□□ -0.62
DDX56-212ENST00000485367 RIPK1Q13546 671 aa11.19□□□□□ -0.62
DDX56-212ENST00000485367 CCINQ13939 588 aa11.19□□□□□ -0.62
DDX56-212ENST00000485367 EML3Q32P44 896 aa11.19□□□□□ -0.62
DDX56-212ENST00000485367 DCAF17Q5H9S7 520 aaPredicted RBP11.19□□□□□ -0.62
DDX56-212ENST00000485367 TMEM196Q5HYL7 178 aa11.19□□□□□ -0.62
DDX56-212ENST00000485367 HGSNATQ68CP4 663 aa11.19□□□□□ -0.62
DDX56-212ENST00000485367 FSTL4Q6MZW2 842 aa11.19□□□□□ -0.62
DDX56-212ENST00000485367 SYNPOQ8N3V7 929 aa11.19□□□□□ -0.62
DDX56-212ENST00000485367 ZBTB44Q8NCP5 570 aa11.19□□□□□ -0.62
DDX56-212ENST00000485367 PDZD8Q8NEN9 1154 aa11.19□□□□□ -0.62
DDX56-212ENST00000485367 ACTRT1Q8TDG2 376 aa11.19□□□□□ -0.62
DDX56-212ENST00000485367 NELL1Q92832 810 aa11.19□□□□□ -0.62
DDX56-212ENST00000485367 CHFRQ96EP1 664 aa11.19□□□□□ -0.62
DDX56-212ENST00000485367 HINFPQ9BQA5 517 aa11.19□□□□□ -0.62
DDX56-212ENST00000485367 NT5C1AQ9BXI3 368 aa11.19□□□□□ -0.62
DDX56-212ENST00000485367 FAM126AQ9BYI3 521 aaPredicted RBP11.19□□□□□ -0.62
DDX56-212ENST00000485367 DNAI2Q9GZS0 605 aa11.19□□□□□ -0.62
DDX56-212ENST00000485367 PPANQ9NQ55 473 aaKnown RBP11.19□□□□□ -0.62
DDX56-212ENST00000485367 SALL4Q9UJQ4 1053 aa11.19□□□□□ -0.62
DDX56-212ENST00000485367 CPQQ9Y646 472 aa11.19□□□□□ -0.62
DDX56-212ENST00000485367 OTOGLQ3ZCN5 2332 aa11.19□□□□□ -0.62
DDX56-212ENST00000485367 GPR179Q6PRD1 2367 aa11.19□□□□□ -0.62
DDX56-212ENST00000485367 TRDMT1O14717 391 aaKnown RBP11.18□□□□□ -0.62
DDX56-212ENST00000485367 SCAMP3O14828 347 aaKnown RBP11.18□□□□□ -0.62
DDX56-212ENST00000485367 SLC16A3O15427 465 aaKnown RBP11.18□□□□□ -0.62
DDX56-212ENST00000485367 RAD51CO43502 376 aa11.18□□□□□ -0.62
DDX56-212ENST00000485367 PALMO75781 387 aa11.18□□□□□ -0.62
DDX56-212ENST00000485367 OAS1P00973 400 aaKnown RBP11.18□□□□□ -0.62
DDX56-212ENST00000485367 FAM200BP0CF97 657 aa11.18□□□□□ -0.62
DDX56-212ENST00000485367 TDGF1P13385 188 aa11.18□□□□□ -0.62
DDX56-212ENST00000485367 TCF3P15923 654 aa11.18□□□□□ -0.62
DDX56-212ENST00000485367 CTNNA1P35221 906 aaKnown RBP11.18□□□□□ -0.62
DDX56-212ENST00000485367 GALK1P51570 392 aa11.18□□□□□ -0.62
DDX56-212ENST00000485367 MCCD1P59942 119 aaPredicted RBP11.18□□□□□ -0.62
DDX56-212ENST00000485367 ZXDBP98169 803 aa11.18□□□□□ -0.62
DDX56-212ENST00000485367 ZNF844Q08AG5 666 aa11.18□□□□□ -0.62
DDX56-212ENST00000485367 NR1H3Q13133 447 aa11.18□□□□□ -0.62
DDX56-212ENST00000485367 SLC18A3Q16572 532 aa11.18□□□□□ -0.62
DDX56-212ENST00000485367 HECTD3Q5T447 861 aa11.18□□□□□ -0.62
DDX56-212ENST00000485367 SFMBT2Q5VUG0 894 aa11.18□□□□□ -0.62
DDX56-212ENST00000485367 NAIF1Q69YI7 327 aaPredicted RBP11.18□□□□□ -0.62
DDX56-212ENST00000485367 TLDC1Q6P9B6 456 aa11.18□□□□□ -0.62
DDX56-212ENST00000485367 FBXL13Q8NEE6 735 aa11.18□□□□□ -0.62
DDX56-212ENST00000485367 ZMIZ2Q8NF64 920 aa11.18□□□□□ -0.62
DDX56-212ENST00000485367 OVCA2Q8WZ82 227 aa11.18□□□□□ -0.62
DDX56-212ENST00000485367 MS4A14Q96JA4 679 aa11.18□□□□□ -0.62
DDX56-212ENST00000485367 PSMB7Q99436 277 aa11.18□□□□□ -0.62
DDX56-212ENST00000485367 HNRNPABQ99729 332 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms