RNA–Protein interactions for RNA: ENST00000484388.1

ABCA4-206, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 2

Gene ABCA4, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-206ENST00000484388 GRID2IPA4D2P6 1211 aa2.47□□□□□ -2.01
ABCA4-206ENST00000484388 TBC1D3BA6NDS4 549 aa2.47□□□□□ -2.01
ABCA4-206ENST00000484388 TBC1D3FA6NER0 549 aaPredicted RBP2.47□□□□□ -2.01
ABCA4-206ENST00000484388 LINC00473A8K010 186 aa2.47□□□□□ -2.01
ABCA4-206ENST00000484388 TBC1D3LB9A6J9 549 aa2.47□□□□□ -2.01
ABCA4-206ENST00000484388 H3BNC9 293 aa2.47□□□□□ -2.01
ABCA4-206ENST00000484388 QSOX1O00391 747 aa2.47□□□□□ -2.01
ABCA4-206ENST00000484388 KLK10O43240 276 aa2.47□□□□□ -2.01
ABCA4-206ENST00000484388 PRAMEF2O60811 474 aa2.47□□□□□ -2.01
ABCA4-206ENST00000484388 C1RP00736 705 aa2.47□□□□□ -2.01
ABCA4-206ENST00000484388 CD4P01730 458 aa2.47□□□□□ -2.01
ABCA4-206ENST00000484388 ALDOAP04075 364 aaKnown RBP2.47□□□□□ -2.01
ABCA4-206ENST00000484388 CSF1P09603 554 aa2.47□□□□□ -2.01
ABCA4-206ENST00000484388 IFIT1P09914 478 aaKnown RBP2.47□□□□□ -2.01
ABCA4-206ENST00000484388 ELFN1P0C7U0 828 aa2.47□□□□□ -2.01
ABCA4-206ENST00000484388 TBC1D3HP0C7X1 549 aa2.47□□□□□ -2.01
ABCA4-206ENST00000484388 ENGP17813 658 aa2.47□□□□□ -2.01
ABCA4-206ENST00000484388 SFPQP23246 707 aaKnown RBP eCLIP2.47□□□□□ -2.01
ABCA4-206ENST00000484388 GALNSP34059 522 aa2.47□□□□□ -2.01
ABCA4-206ENST00000484388 PSMC2P35998 433 aaKnown RBP2.47□□□□□ -2.01
ABCA4-206ENST00000484388 PNPLA4P41247 253 aa2.47□□□□□ -2.01
ABCA4-206ENST00000484388 CCT8P50990 548 aa2.47□□□□□ -2.01
ABCA4-206ENST00000484388 NR1H2P55055 460 aa2.47□□□□□ -2.01
ABCA4-206ENST00000484388 TAS2R50P59544 299 aa2.47□□□□□ -2.01
ABCA4-206ENST00000484388 RAE1P78406 368 aaKnown RBP2.47□□□□□ -2.01
ABCA4-206ENST00000484388 LMOD3Q0VAK6 560 aa2.47□□□□□ -2.01
ABCA4-206ENST00000484388 TBL3Q12788 808 aaKnown RBP2.47□□□□□ -2.01
ABCA4-206ENST00000484388 THOC5Q13769 683 aaKnown RBP2.47□□□□□ -2.01
ABCA4-206ENST00000484388 ZNF169Q14929 603 aaPredicted RBP2.47□□□□□ -2.01
ABCA4-206ENST00000484388 ERCC6LQ2NKX8 1250 aa2.47□□□□□ -2.01
ABCA4-206ENST00000484388 RNASE12Q5GAN4 147 aaKnown RBP2.47□□□□□ -2.01
ABCA4-206ENST00000484388 L1TD1Q5T7N2 865 aaKnown RBP2.47□□□□□ -2.01
ABCA4-206ENST00000484388 LIPMQ5VYY2 423 aa2.47□□□□□ -2.01
ABCA4-206ENST00000484388 TBC1D3GQ6DHY5 549 aa2.47□□□□□ -2.01
ABCA4-206ENST00000484388 TBC1D3CQ6IPX1 549 aa2.47□□□□□ -2.01
ABCA4-206ENST00000484388 KIRREL2Q6UWL6 708 aa2.47□□□□□ -2.01
ABCA4-206ENST00000484388 KYAT3Q6YP21 454 aaKnown RBP2.47□□□□□ -2.01
ABCA4-206ENST00000484388 ZSCAN2Q7Z7L9 614 aaPredicted RBP2.47□□□□□ -2.01
ABCA4-206ENST00000484388 HEATR4Q86WZ0 1026 aa2.47□□□□□ -2.01
ABCA4-206ENST00000484388 LAS2Q8IYD9 372 aa2.47□□□□□ -2.01
ABCA4-206ENST00000484388 ULK2Q8IYT8 1036 aa2.47□□□□□ -2.01
ABCA4-206ENST00000484388 TBC1D3Q8IZP1 549 aaPredicted RBP2.47□□□□□ -2.01
ABCA4-206ENST00000484388 SLC44A3Q8N4M1 653 aa2.47□□□□□ -2.01
ABCA4-206ENST00000484388 ANKRD44Q8N8A2 993 aa2.47□□□□□ -2.01
ABCA4-206ENST00000484388 SRFBP1Q8NEF9 429 aaKnown RBP2.47□□□□□ -2.01
ABCA4-206ENST00000484388 ACTRT2Q8TDY3 377 aa2.47□□□□□ -2.01
ABCA4-206ENST00000484388 RFFLQ8WZ73 363 aa2.47□□□□□ -2.01
ABCA4-206ENST00000484388 ST8SIA4Q92187 359 aa2.47□□□□□ -2.01
ABCA4-206ENST00000484388 HDAC2Q92769 488 aaKnown RBP2.47□□□□□ -2.01
ABCA4-206ENST00000484388 BBC3Q96PG8 261 aaPredicted RBP2.47□□□□□ -2.01
ABCA4-206ENST00000484388 KRTAP4-12Q9BQ66 201 aa2.47□□□□□ -2.01
ABCA4-206ENST00000484388 HERC2P3Q9BVR0 1158 aa2.47□□□□□ -2.01
ABCA4-206ENST00000484388 ELOVL1Q9BW60 279 aa2.47□□□□□ -2.01
ABCA4-206ENST00000484388 AGXT2Q9BYV1 514 aa2.47□□□□□ -2.01
ABCA4-206ENST00000484388 MMRN2Q9H8L6 949 aa2.47□□□□□ -2.01
ABCA4-206ENST00000484388 CYP4F11Q9HBI6 524 aa2.47□□□□□ -2.01
ABCA4-206ENST00000484388 PDE11AQ9HCR9 933 aa2.47□□□□□ -2.01
ABCA4-206ENST00000484388 SLC22A11Q9NSA0 550 aa2.47□□□□□ -2.01
ABCA4-206ENST00000484388 TERF2IPQ9NYB0 399 aa2.47□□□□□ -2.01
ABCA4-206ENST00000484388 MAP3K20Q9NYL2 800 aaKnown RBP2.47□□□□□ -2.01
ABCA4-206ENST00000484388 TBX20Q9UMR3 447 aa2.47□□□□□ -2.01
ABCA4-206ENST00000484388 RCE1Q9Y256 329 aa2.47□□□□□ -2.01
ABCA4-206ENST00000484388 GDAQ9Y2T3 454 aa2.47□□□□□ -2.01
ABCA4-206ENST00000484388 PCDHB2Q9Y5E7 798 aa2.47□□□□□ -2.01
ABCA4-206ENST00000484388 COPG1Q9Y678 874 aaKnown RBP2.47□□□□□ -2.01
ABCA4-206ENST00000484388 NISCHQ9Y2I1 1504 aa2.47□□□□□ -2.01
ABCA4-206ENST00000484388 POLR2AP24928 1970 aaKnown RBP2.47□□□□□ -2.01
ABCA4-206ENST00000484388 SALL3Q9BXA9 1300 aa2.46□□□□□ -2.02
ABCA4-206ENST00000484388 RB1CC1Q8TDY2 1594 aa2.46□□□□□ -2.02
ABCA4-206ENST00000484388 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP2.46□□□□□ -2.02
ABCA4-206ENST00000484388 AGAP5A6NIR3 686 aa2.46□□□□□ -2.02
ABCA4-206ENST00000484388 TTC34A8MYJ7 566 aa2.46□□□□□ -2.02
ABCA4-206ENST00000484388 BTBD19C9JJ37 291 aa2.46□□□□□ -2.02
ABCA4-206ENST00000484388 H7C1Q1 480 aa2.46□□□□□ -2.02
ABCA4-206ENST00000484388 ZNF213O14771 459 aa2.46□□□□□ -2.02
ABCA4-206ENST00000484388 NARSO43776 548 aaKnown RBP2.46□□□□□ -2.02
ABCA4-206ENST00000484388 GUCY1B2O75343 617 aa2.46□□□□□ -2.02
ABCA4-206ENST00000484388 BAIAP3O94812 1187 aa2.46□□□□□ -2.02
ABCA4-206ENST00000484388 TMEM63AO94886 807 aa2.46□□□□□ -2.02
ABCA4-206ENST00000484388 DDX58O95786 925 aaKnown RBP2.46□□□□□ -2.02
ABCA4-206ENST00000484388 MT-CO3P00414 261 aa2.46□□□□□ -2.02
ABCA4-206ENST00000484388 HNRNPA1P09651 372 aaKnown RBP eCLIP2.46□□□□□ -2.02
ABCA4-206ENST00000484388 EBLN1P0CF75 366 aa2.46□□□□□ -2.02
ABCA4-206ENST00000484388 ATP1A3P13637 1013 aa2.46□□□□□ -2.02
ABCA4-206ENST00000484388 ACP5P13686 325 aa2.46□□□□□ -2.02
ABCA4-206ENST00000484388 APEHP13798 732 aaKnown RBP2.46□□□□□ -2.02
ABCA4-206ENST00000484388 ATF7P17544 494 aaPredicted RBP2.46□□□□□ -2.02
ABCA4-206ENST00000484388 WT1P19544 449 aaPredicted RBP2.46□□□□□ -2.02
ABCA4-206ENST00000484388 DRD4P21917 467 aa2.46□□□□□ -2.02
ABCA4-206ENST00000484388 BDNFP23560 247 aa2.46□□□□□ -2.02
ABCA4-206ENST00000484388 FPR3P25089 353 aa2.46□□□□□ -2.02
ABCA4-206ENST00000484388 HOXD12P35452 270 aa2.46□□□□□ -2.02
ABCA4-206ENST00000484388 RARRES1P49788 294 aa2.46□□□□□ -2.02
ABCA4-206ENST00000484388 AGTR2P50052 363 aa2.46□□□□□ -2.02
ABCA4-206ENST00000484388 SOX10P56693 466 aa2.46□□□□□ -2.02
ABCA4-206ENST00000484388 RNASELQ05823 741 aaKnown RBP2.46□□□□□ -2.02
ABCA4-206ENST00000484388 FOXI1Q12951 378 aa2.46□□□□□ -2.02
ABCA4-206ENST00000484388 CNGA3Q16281 694 aa2.46□□□□□ -2.02
ABCA4-206ENST00000484388 GPR162Q16538 588 aa2.46□□□□□ -2.02
ABCA4-206ENST00000484388 PCID2Q5JVF3 399 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms