RNA–Protein interactions for RNA: ENST00000484388.1

ABCA4-206, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 2

Gene ABCA4, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-206ENST00000484388 CHIC1Q5VXU3 224 aa9.59□□□□□ -0.87
ABCA4-206ENST00000484388 AEBP2Q6ZN18 517 aaPredicted RBP9.58□□□□□ -0.88
ABCA4-206ENST00000484388 PHF23Q9BUL5 403 aaPredicted RBP8.45□□□□□ -1.06
ABCA4-206ENST00000484388 SENP3Q9H4L4 574 aaPredicted RBP8.12□□□□□ -1.11
ABCA4-206ENST00000484388 PLPPR3Q6T4P5 718 aa7.89□□□□□ -1.15
ABCA4-206ENST00000484388 FOXD1Q16676 465 aa7.48□□□□□ -1.21
ABCA4-206ENST00000484388 PPP6R1Q9UPN7 881 aa7.37□□□□□ -1.23
ABCA4-206ENST00000484388 ADRA2BP18089 450 aa7.36□□□□□ -1.23
ABCA4-206ENST00000484388 PIAS4Q8N2W9 510 aaPredicted RBP7.1□□□□□ -1.27
ABCA4-206ENST00000484388 KCNA4P22459 653 aa7.04□□□□□ -1.28
ABCA4-206ENST00000484388 PPP4R3CPQ6ZMV5 832 aa6.97□□□□□ -1.29
ABCA4-206ENST00000484388 NCBP3Q53F19 620 aaKnown RBP6.87□□□□□ -1.31
ABCA4-206ENST00000484388 MSH5O43196 834 aa6.84□□□□□ -1.31
ABCA4-206ENST00000484388 SCAF1Q9H7N4 1312 aaKnown RBP6.77□□□□□ -1.32
ABCA4-206ENST00000484388 EHMT2Q96KQ7 1210 aa6.77□□□□□ -1.33
ABCA4-206ENST00000484388 NPM3O75607 178 aaKnown RBP6.75□□□□□ -1.33
ABCA4-206ENST00000484388 SLC4A1APQ9BWU0 796 aaKnown RBP6.75□□□□□ -1.33
ABCA4-206ENST00000484388 CNKSR2Q8WXI2 1034 aa6.74□□□□□ -1.33
ABCA4-206ENST00000484388 CSRNP3Q8WYN3 585 aa6.64□□□□□ -1.35
ABCA4-206ENST00000484388 MAPK8IP2Q13387 824 aaPredicted RBP6.61□□□□□ -1.35
ABCA4-206ENST00000484388 DNAJC5BQ9UF47 199 aa6.6□□□□□ -1.35
ABCA4-206ENST00000484388 RNF216Q9NWF9 866 aaPredicted RBP6.56□□□□□ -1.36
ABCA4-206ENST00000484388 DMRT2Q9Y5R5 561 aa6.52□□□□□ -1.37
ABCA4-206ENST00000484388 ZBTB22O15209 634 aa6.48□□□□□ -1.37
ABCA4-206ENST00000484388 HOXD11P31277 338 aaPredicted RBP6.48□□□□□ -1.37
ABCA4-206ENST00000484388 FOXD4L1Q9NU39 408 aa6.44□□□□□ -1.38
ABCA4-206ENST00000484388 SLC4A2P04920 1241 aa6.32□□□□□ -1.4
ABCA4-206ENST00000484388 POTEDQ86YR6 584 aa6.27□□□□□ -1.41
ABCA4-206ENST00000484388 MYCNP04198 464 aaPredicted RBP6.24□□□□□ -1.41
ABCA4-206ENST00000484388 ATXN8OSP0DMR3 200 aa6.23□□□□□ -1.41
ABCA4-206ENST00000484388 DCAF8L1A6NGE4 600 aa6.15□□□□□ -1.42
ABCA4-206ENST00000484388 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.13□□□□□ -1.43
ABCA4-206ENST00000484388 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.1□□□□□ -1.43
ABCA4-206ENST00000484388 HNRNPUL2Q1KMD3 747 aaKnown RBP6.1□□□□□ -1.43
ABCA4-206ENST00000484388 SAMD1Q6SPF0 538 aaPredicted RBP6.08□□□□□ -1.44
ABCA4-206ENST00000484388 U3KPZ7 1027 aaPredicted RBP6.07□□□□□ -1.44
ABCA4-206ENST00000484388 ATF5Q9Y2D1 282 aaPredicted RBP6.03□□□□□ -1.44
ABCA4-206ENST00000484388 APLP2Q06481 763 aa5.98□□□□□ -1.45
ABCA4-206ENST00000484388 FKBP8Q14318 412 aa5.96□□□□□ -1.46
ABCA4-206ENST00000484388 ZNF219Q9P2Y4 722 aaPredicted RBP5.93□□□□□ -1.46
ABCA4-206ENST00000484388 RNF39Q9H2S5 420 aa5.88□□□□□ -1.47
ABCA4-206ENST00000484388 AMER1Q5JTC6 1135 aaPredicted RBP5.87□□□□□ -1.47
ABCA4-206ENST00000484388 C1QBPQ07021 282 aaKnown RBP5.83□□□□□ -1.48
ABCA4-206ENST00000484388 RTN4Q9NQC3 1192 aaKnown RBP5.82□□□□□ -1.48
ABCA4-206ENST00000484388 SPINK5Q9NQ38 1064 aaPredicted RBP5.81□□□□□ -1.48
ABCA4-206ENST00000484388 TRHP20396 242 aaPredicted RBP5.8□□□□□ -1.48
ABCA4-206ENST00000484388 FBLN2P98095 1184 aa5.79□□□□□ -1.48
ABCA4-206ENST00000484388 MKRN4PQ13434 485 aaPredicted RBP5.79□□□□□ -1.48
ABCA4-206ENST00000484388 CAPN15O75808 1086 aa5.78□□□□□ -1.48
ABCA4-206ENST00000484388 POLA2Q14181 598 aa5.78□□□□□ -1.48
ABCA4-206ENST00000484388 SPDYE4A6NLX3 237 aa5.77□□□□□ -1.49
ABCA4-206ENST00000484388 PROM2Q8N271 834 aa5.75□□□□□ -1.49
ABCA4-206ENST00000484388 ZBTB12Q9Y330 459 aaPredicted RBP5.74□□□□□ -1.49
ABCA4-206ENST00000484388 FBXO3Q9UK99 471 aa5.73□□□□□ -1.49
ABCA4-206ENST00000484388 ABCB7O75027 752 aa5.67□□□□□ -1.5
ABCA4-206ENST00000484388 DSG3P32926 999 aa5.66□□□□□ -1.5
ABCA4-206ENST00000484388 SLC24A1O60721 1099 aa5.63□□□□□ -1.51
ABCA4-206ENST00000484388 VASPP50552 380 aaPredicted RBP5.62□□□□□ -1.51
ABCA4-206ENST00000484388 SPDYE2BA6NHP3 402 aa5.59□□□□□ -1.51
ABCA4-206ENST00000484388 SPDYE6P0CI01 402 aa5.59□□□□□ -1.51
ABCA4-206ENST00000484388 SPDYE2Q495Y8 402 aa5.59□□□□□ -1.51
ABCA4-206ENST00000484388 SSUH2Q9Y2M2 353 aa5.58□□□□□ -1.52
ABCA4-206ENST00000484388 IFNLR1Q8IU57 520 aaPredicted RBP5.57□□□□□ -1.52
ABCA4-206ENST00000484388 ZNF692Q9BU19 519 aaPredicted RBP5.57□□□□□ -1.52
ABCA4-206ENST00000484388 OSCARQ8IYS5 282 aa5.56□□□□□ -1.52
ABCA4-206ENST00000484388 STAG3Q9UJ98 1225 aa5.55□□□□□ -1.52
ABCA4-206ENST00000484388 CACNB1Q02641 598 aaPredicted RBP5.53□□□□□ -1.52
ABCA4-206ENST00000484388 PABPN1Q86U42 306 aaKnown RBP eCLIP5.51□□□□□ -1.53
ABCA4-206ENST00000484388 SPOCK2Q92563 424 aa5.48□□□□□ -1.53
ABCA4-206ENST00000484388 PKD2Q13563 968 aa5.47□□□□□ -1.53
ABCA4-206ENST00000484388 KLHL34Q8N239 644 aa5.46□□□□□ -1.54
ABCA4-206ENST00000484388 PLCD3Q8N3E9 789 aa5.44□□□□□ -1.54
ABCA4-206ENST00000484388 MIER1Q8N108 512 aa5.43□□□□□ -1.54
ABCA4-206ENST00000484388 PLEKHG5O94827 1062 aa5.41□□□□□ -1.54
ABCA4-206ENST00000484388 PLCB2Q00722 1185 aa5.41□□□□□ -1.54
ABCA4-206ENST00000484388 ZBTB47Q9UFB7 747 aaPredicted RBP5.41□□□□□ -1.54
ABCA4-206ENST00000484388 RBM42Q9BTD8 480 aaKnown RBP5.4□□□□□ -1.54
ABCA4-206ENST00000484388 AKT1S1Q96B36 256 aa5.39□□□□□ -1.55
ABCA4-206ENST00000484388 ECM2O94769 699 aaPredicted RBP5.38□□□□□ -1.55
ABCA4-206ENST00000484388 SPDYE1Q8NFV5 336 aaPredicted RBP5.37□□□□□ -1.55
ABCA4-206ENST00000484388 DCAF8L2P0C7V8 631 aa5.36□□□□□ -1.55
ABCA4-206ENST00000484388 TRIM41Q8WV44 630 aa5.34□□□□□ -1.55
ABCA4-206ENST00000484388 RGL2O15211 777 aa5.33□□□□□ -1.56
ABCA4-206ENST00000484388 BBXQ8WY36 941 aaPredicted RBP5.33□□□□□ -1.56
ABCA4-206ENST00000484388 REM2Q8IYK8 340 aaPredicted RBP5.32□□□□□ -1.56
ABCA4-206ENST00000484388 CIZ1Q9ULV3 898 aaPredicted RBP5.32□□□□□ -1.56
ABCA4-206ENST00000484388 NPM1P06748 294 aaKnown RBP eCLIP5.3□□□□□ -1.56
ABCA4-206ENST00000484388 NUBP1P53384 320 aa5.3□□□□□ -1.56
ABCA4-206ENST00000484388 GSE1Q14687 1217 aa5.3□□□□□ -1.56
ABCA4-206ENST00000484388 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.3□□□□□ -1.56
ABCA4-206ENST00000484388 PRR29P0C7W0 189 aa5.29□□□□□ -1.56
ABCA4-206ENST00000484388 CREBZFQ9NS37 354 aa5.29□□□□□ -1.56
ABCA4-206ENST00000484388 HAP1P54257 671 aaPredicted RBP5.28□□□□□ -1.56
ABCA4-206ENST00000484388 CLEC11AQ9Y240 323 aa5.28□□□□□ -1.56
ABCA4-206ENST00000484388 MNX1P50219 401 aaPredicted RBP5.27□□□□□ -1.57
ABCA4-206ENST00000484388 VSIG10Q8N0Z9 540 aa5.27□□□□□ -1.57
ABCA4-206ENST00000484388 DNAJC5Q9H3Z4 198 aa5.25□□□□□ -1.57
ABCA4-206ENST00000484388 PITPNM1O00562 1244 aa5.24□□□□□ -1.57
ABCA4-206ENST00000484388 CHGAP10645 457 aaKnown RBP5.24□□□□□ -1.57
ABCA4-206ENST00000484388 DCAF8Q5TAQ9 597 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms