RNA–Protein interactions for RNA: ENST00000477583.1

CACUL1-202, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 1 (best)

Gene CACUL1, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-202ENST00000477583 FAM90A5PA8MXJ8 464 aa2.94□□□□□ -1.94
CACUL1-202ENST00000477583 KIF28PB7ZC32 967 aa2.94□□□□□ -1.94
CACUL1-202ENST00000477583 M0QYT0 321 aa2.94□□□□□ -1.94
CACUL1-202ENST00000477583 CLIC1O00299 241 aa2.94□□□□□ -1.94
CACUL1-202ENST00000477583 IPO5O00410 1097 aaKnown RBP2.94□□□□□ -1.94
CACUL1-202ENST00000477583 FYB1O15117 783 aa2.94□□□□□ -1.94
CACUL1-202ENST00000477583 PPP6R2O75170 966 aa2.94□□□□□ -1.94
CACUL1-202ENST00000477583 GCATO75600 419 aa2.94□□□□□ -1.94
CACUL1-202ENST00000477583 MT-CO3P00414 261 aa2.94□□□□□ -1.94
CACUL1-202ENST00000477583 FAM90A15PP0C7V4 464 aa2.94□□□□□ -1.94
CACUL1-202ENST00000477583 FAM90A14PP0C7W9 464 aa2.94□□□□□ -1.94
CACUL1-202ENST00000477583 PEPDP12955 493 aa2.94□□□□□ -1.94
CACUL1-202ENST00000477583 MMP8P22894 467 aa2.94□□□□□ -1.94
CACUL1-202ENST00000477583 THBS4P35443 961 aa2.94□□□□□ -1.94
CACUL1-202ENST00000477583 IGHMBP2P38935 993 aaKnown RBP2.94□□□□□ -1.94
CACUL1-202ENST00000477583 JAK3P52333 1124 aa2.94□□□□□ -1.94
CACUL1-202ENST00000477583 AP2B1P63010 937 aa2.94□□□□□ -1.94
CACUL1-202ENST00000477583 DHX8Q14562 1220 aaKnown RBP2.94□□□□□ -1.94
CACUL1-202ENST00000477583 KCNB1Q14721 858 aa2.94□□□□□ -1.94
CACUL1-202ENST00000477583 MFSD13AQ14CX5 517 aa2.94□□□□□ -1.94
CACUL1-202ENST00000477583 POSTNQ15063 836 aa2.94□□□□□ -1.94
CACUL1-202ENST00000477583 FAM187BQ17R55 369 aa2.94□□□□□ -1.94
CACUL1-202ENST00000477583 TIGD6Q17RP2 521 aa2.94□□□□□ -1.94
CACUL1-202ENST00000477583 TRIM60Q495X7 471 aa2.94□□□□□ -1.94
CACUL1-202ENST00000477583 INO80DQ53TQ3 878 aaPredicted RBP2.94□□□□□ -1.94
CACUL1-202ENST00000477583 AWAT1Q58HT5 328 aa2.94□□□□□ -1.94
CACUL1-202ENST00000477583 TANGO2Q6ICL3 276 aa2.94□□□□□ -1.94
CACUL1-202ENST00000477583 ACSM6Q6P461 480 aa2.94□□□□□ -1.94
CACUL1-202ENST00000477583 TMEM65Q6PI78 240 aa2.94□□□□□ -1.94
CACUL1-202ENST00000477583 DCDC5Q6ZRR9 648 aa2.94□□□□□ -1.94
CACUL1-202ENST00000477583 TRABD2AQ86V40 505 aa2.94□□□□□ -1.94
CACUL1-202ENST00000477583 CHSY1Q86X52 802 aa2.94□□□□□ -1.94
CACUL1-202ENST00000477583 SLC44A2Q8IWA5 706 aaPredicted RBP2.94□□□□□ -1.94
CACUL1-202ENST00000477583 CCDC117Q8IWD4 279 aaPredicted RBP2.94□□□□□ -1.94
CACUL1-202ENST00000477583 SMC5Q8IY18 1101 aa2.94□□□□□ -1.94
CACUL1-202ENST00000477583 SAMD14Q8IZD0 417 aaPredicted RBP2.94□□□□□ -1.94
CACUL1-202ENST00000477583 GALNT16Q8N428 558 aa2.94□□□□□ -1.94
CACUL1-202ENST00000477583 ANKRD42Q8N9B4 389 aa2.94□□□□□ -1.94
CACUL1-202ENST00000477583 OR52L2PQ8NGH6 319 aa2.94□□□□□ -1.94
CACUL1-202ENST00000477583 SPATA3Q8NHX4 192 aa2.94□□□□□ -1.94
CACUL1-202ENST00000477583 OTUD7AQ8TE49 926 aaPredicted RBP2.94□□□□□ -1.94
CACUL1-202ENST00000477583 TRAPPC12Q8WVT3 735 aa2.94□□□□□ -1.94
CACUL1-202ENST00000477583 NPIPB3Q92617 1050 aa2.94□□□□□ -1.94
CACUL1-202ENST00000477583 RSC1A1Q92681 617 aa2.94□□□□□ -1.94
CACUL1-202ENST00000477583 RITA1Q96K30 269 aa2.94□□□□□ -1.94
CACUL1-202ENST00000477583 CCDC17Q96LX7 622 aa2.94□□□□□ -1.94
CACUL1-202ENST00000477583 HS6ST2Q96MM7 605 aa2.94□□□□□ -1.94
CACUL1-202ENST00000477583 PAAF1Q9BRP4 392 aa2.94□□□□□ -1.94
CACUL1-202ENST00000477583 MECRQ9BV79 373 aa2.94□□□□□ -1.94
CACUL1-202ENST00000477583 TMEM120AQ9BXJ8 343 aa2.94□□□□□ -1.94
CACUL1-202ENST00000477583 MYLK2Q9H1R3 596 aa2.94□□□□□ -1.94
CACUL1-202ENST00000477583 PABPC3Q9H361 631 aaKnown RBP2.94□□□□□ -1.94
CACUL1-202ENST00000477583 PRDM8Q9NQV8 689 aa2.94□□□□□ -1.94
CACUL1-202ENST00000477583 PDGFCQ9NRA1 345 aa2.94□□□□□ -1.94
CACUL1-202ENST00000477583 ABHD10Q9NUJ1 306 aa2.94□□□□□ -1.94
CACUL1-202ENST00000477583 FBXO28Q9NVF7 368 aa2.94□□□□□ -1.94
CACUL1-202ENST00000477583 DAPP1Q9UN19 280 aa2.94□□□□□ -1.94
CACUL1-202ENST00000477583 PCDHGB3Q9Y5G1 929 aa2.94□□□□□ -1.94
CACUL1-202ENST00000477583 LOC105369274A0A096LPK9 316 aa2.93□□□□□ -1.94
CACUL1-202ENST00000477583 LOC102723532A0A0G2JNH3 316 aa2.93□□□□□ -1.94
CACUL1-202ENST00000477583 PLEKHD1A6NEE1 506 aa2.93□□□□□ -1.94
CACUL1-202ENST00000477583 HMX3A6NHT5 357 aa2.93□□□□□ -1.94
CACUL1-202ENST00000477583 POC1B-GALNT4F8VUJ3 575 aa2.93□□□□□ -1.94
CACUL1-202ENST00000477583 DUSP1P28562 367 aa2.93□□□□□ -1.94
CACUL1-202ENST00000477583 POLE2P56282 527 aa2.93□□□□□ -1.94
CACUL1-202ENST00000477583 WDR5P61964 334 aaKnown RBP2.93□□□□□ -1.94
CACUL1-202ENST00000477583 SF3A3Q12874 501 aaKnown RBP eCLIP2.93□□□□□ -1.94
CACUL1-202ENST00000477583 SLC14A1Q13336 389 aa2.93□□□□□ -1.94
CACUL1-202ENST00000477583 GAB1Q13480 694 aa2.93□□□□□ -1.94
CACUL1-202ENST00000477583 PRKG1Q13976 671 aa2.93□□□□□ -1.94
CACUL1-202ENST00000477583 LARS2Q15031 903 aaKnown RBP2.93□□□□□ -1.94
CACUL1-202ENST00000477583 TRIP6Q15654 476 aaKnown RBP2.93□□□□□ -1.94
CACUL1-202ENST00000477583 AAK1Q2M2I8 961 aa2.93□□□□□ -1.94
CACUL1-202ENST00000477583 GORABQ5T7V8 394 aa2.93□□□□□ -1.94
CACUL1-202ENST00000477583 ATPAF1Q5TC12 328 aaPredicted RBP2.93□□□□□ -1.94
CACUL1-202ENST00000477583 NFRKBQ6P4R8 1299 aa2.93□□□□□ -1.94
CACUL1-202ENST00000477583 KYAT3Q6YP21 454 aaKnown RBP2.93□□□□□ -1.94
CACUL1-202ENST00000477583 LDHAL6AQ6ZMR3 332 aa2.93□□□□□ -1.94
CACUL1-202ENST00000477583 ZDHHC17Q8IUH5 632 aa2.93□□□□□ -1.94
CACUL1-202ENST00000477583 SUGP1Q8IWZ8 645 aaKnown RBP2.93□□□□□ -1.94
CACUL1-202ENST00000477583 OR4N4Q8N0Y3 316 aa2.93□□□□□ -1.94
CACUL1-202ENST00000477583 GALNT15Q8N3T1 639 aa2.93□□□□□ -1.94
CACUL1-202ENST00000477583 GALNT4Q8N4A0 578 aa2.93□□□□□ -1.94
CACUL1-202ENST00000477583 PNLDC1Q8NA58 520 aaKnown RBP2.93□□□□□ -1.94
CACUL1-202ENST00000477583 SPATA5Q8NB90 893 aa2.93□□□□□ -1.94
CACUL1-202ENST00000477583 PRSS3P2Q8NHM4 247 aa2.93□□□□□ -1.94
CACUL1-202ENST00000477583 ADAMTS18Q8TE60 1221 aa2.93□□□□□ -1.94
CACUL1-202ENST00000477583 GLMPQ8WWB7 406 aa2.93□□□□□ -1.94
CACUL1-202ENST00000477583 TBC1D20Q96BZ9 403 aa2.93□□□□□ -1.94
CACUL1-202ENST00000477583 C5orf34Q96MH7 638 aa2.93□□□□□ -1.94
CACUL1-202ENST00000477583 TRAPPC9Q96Q05 1148 aa2.93□□□□□ -1.94
CACUL1-202ENST00000477583 FYTTD1Q96QD9 318 aaKnown RBP2.93□□□□□ -1.94
CACUL1-202ENST00000477583 TMEM79Q9BSE2 394 aa2.93□□□□□ -1.94
CACUL1-202ENST00000477583 PAGR1Q9BTK6 254 aa2.93□□□□□ -1.94
CACUL1-202ENST00000477583 DDX23Q9BUQ8 820 aaKnown RBP2.93□□□□□ -1.94
CACUL1-202ENST00000477583 ELOVL1Q9BW60 279 aa2.93□□□□□ -1.94
CACUL1-202ENST00000477583 BRD8Q9H0E9 1235 aa2.93□□□□□ -1.94
CACUL1-202ENST00000477583 CDCP1Q9H5V8 836 aa2.93□□□□□ -1.94
CACUL1-202ENST00000477583 CCDC134Q9H6E4 229 aa2.93□□□□□ -1.94
CACUL1-202ENST00000477583 MYH16Q9H6N6 1097 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms