RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 GYPCP04921 128 aa9.56□□□□□ -0.88
SMC4-213ENST00000472282 MMEP08473 750 aa9.56□□□□□ -0.88
SMC4-213ENST00000472282 ZDHHC11BP0C7U3 371 aa9.56□□□□□ -0.88
SMC4-213ENST00000472282 LCP1P13796 627 aa9.56□□□□□ -0.88
SMC4-213ENST00000472282 HNRNPLP14866 589 aaKnown RBP eCLIP9.56□□□□□ -0.882e-15■■■■■ 47.4
SMC4-213ENST00000472282 FERP16591 822 aa9.56□□□□□ -0.88
SMC4-213ENST00000472282 PFKLP17858 780 aa9.56□□□□□ -0.88
SMC4-213ENST00000472282 DRD1P21728 446 aa9.56□□□□□ -0.88
SMC4-213ENST00000472282 HOXA6P31267 233 aa9.56□□□□□ -0.88
SMC4-213ENST00000472282 GPD2P43304 727 aa9.56□□□□□ -0.88
SMC4-213ENST00000472282 SEC13P55735 322 aa9.56□□□□□ -0.88
SMC4-213ENST00000472282 DHCR24Q15392 516 aa9.56□□□□□ -0.88
SMC4-213ENST00000472282 CCDC6Q16204 474 aa9.56□□□□□ -0.88
SMC4-213ENST00000472282 ASIC2Q16515 512 aa9.56□□□□□ -0.88
SMC4-213ENST00000472282 RAB41Q5JT25 222 aa9.56□□□□□ -0.88
SMC4-213ENST00000472282 RHBDF2Q6PJF5 856 aa9.56□□□□□ -0.88
SMC4-213ENST00000472282 ERMP1Q7Z2K6 904 aa9.56□□□□□ -0.88
SMC4-213ENST00000472282 TMC6Q7Z403 805 aa9.56□□□□□ -0.88
SMC4-213ENST00000472282 KBTBD6Q86V97 674 aa9.56□□□□□ -0.88
SMC4-213ENST00000472282 ADGRG2Q8IZP9 1017 aa9.56□□□□□ -0.88
SMC4-213ENST00000472282 C1orf131Q8NDD1 294 aaKnown RBP9.56□□□□□ -0.88
SMC4-213ENST00000472282 PDZD8Q8NEN9 1154 aa9.56□□□□□ -0.88
SMC4-213ENST00000472282 CPLX3Q8WVH0 158 aa9.56□□□□□ -0.88
SMC4-213ENST00000472282 DDX1Q92499 740 aaKnown RBP9.56□□□□□ -0.88
SMC4-213ENST00000472282 IQCDQ96DY2 449 aa9.56□□□□□ -0.88
SMC4-213ENST00000472282 ULBP1Q9BZM6 244 aa9.56□□□□□ -0.88
SMC4-213ENST00000472282 EDEM3Q9BZQ6 932 aa9.56□□□□□ -0.88
SMC4-213ENST00000472282 UBXN6Q9BZV1 441 aa9.56□□□□□ -0.88
SMC4-213ENST00000472282 PDCL3Q9H2J4 239 aa9.56□□□□□ -0.88
SMC4-213ENST00000472282 FBXO44Q9H4M3 255 aa9.56□□□□□ -0.88
SMC4-213ENST00000472282 ZDHHC4Q9NPG8 344 aa9.56□□□□□ -0.88
SMC4-213ENST00000472282 ST7Q9NRC1 585 aa9.56□□□□□ -0.88
SMC4-213ENST00000472282 COMMD8Q9NX08 183 aa9.56□□□□□ -0.88
SMC4-213ENST00000472282 OSER1Q9NX31 292 aa9.56□□□□□ -0.88
SMC4-213ENST00000472282 SLC8A2Q9UPR5 921 aa9.56□□□□□ -0.88
SMC4-213ENST00000472282 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.56□□□□□ -0.881e-12■■■□□ 18.8
SMC4-213ENST00000472282 DMXL1Q9Y485 3027 aa9.55□□□□□ -0.88
SMC4-213ENST00000472282 DCLK1O15075 740 aa9.55□□□□□ -0.88
SMC4-213ENST00000472282 NFATC1O95644 943 aa9.55□□□□□ -0.88
SMC4-213ENST00000472282 RETP07949 1114 aa9.55□□□□□ -0.88
SMC4-213ENST00000472282 CHRNB2P17787 502 aa9.55□□□□□ -0.88
SMC4-213ENST00000472282 CASP14P31944 242 aa9.55□□□□□ -0.88
SMC4-213ENST00000472282 CNR2P34972 360 aa9.55□□□□□ -0.88
SMC4-213ENST00000472282 PPP3CCP48454 512 aa9.55□□□□□ -0.88
SMC4-213ENST00000472282 ZNF75DP51815 510 aa9.55□□□□□ -0.88
SMC4-213ENST00000472282 ATXN1P54253 815 aaKnown RBP9.55□□□□□ -0.88
SMC4-213ENST00000472282 AMPD2Q01433 879 aa9.55□□□□□ -0.88
SMC4-213ENST00000472282 FMO1Q01740 532 aa9.55□□□□□ -0.88
SMC4-213ENST00000472282 CDR2Q01850 454 aa9.55□□□□□ -0.88
SMC4-213ENST00000472282 PDCLQ13371 301 aa9.55□□□□□ -0.88
SMC4-213ENST00000472282 TRIM14Q14142 442 aa9.55□□□□□ -0.88
SMC4-213ENST00000472282 DMC1Q14565 340 aa9.55□□□□□ -0.88
SMC4-213ENST00000472282 PUM1Q14671 1186 aaKnown RBP eCLIP9.55□□□□□ -0.88
SMC4-213ENST00000472282 TMEM259Q4ZIN3 620 aa9.55□□□□□ -0.88
SMC4-213ENST00000472282 EMC10Q5UCC4 262 aa9.55□□□□□ -0.88
SMC4-213ENST00000472282 SFMBT2Q5VUG0 894 aa9.55□□□□□ -0.88
SMC4-213ENST00000472282 SNX30Q5VWJ9 437 aa9.55□□□□□ -0.88
SMC4-213ENST00000472282 SPECC1LQ69YQ0 1117 aa9.55□□□□□ -0.88
SMC4-213ENST00000472282 CEP68Q76N32 757 aa9.55□□□□□ -0.88
SMC4-213ENST00000472282 SYT13Q7L8C5 426 aa9.55□□□□□ -0.88
SMC4-213ENST00000472282 DGLUCYQ7Z3D6 616 aa9.55□□□□□ -0.88
SMC4-213ENST00000472282 CCDC186Q7Z3E2 898 aa9.55□□□□□ -0.88
SMC4-213ENST00000472282 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.55□□□□□ -0.88
SMC4-213ENST00000472282 ZNF677Q86XU0 584 aa9.55□□□□□ -0.88
SMC4-213ENST00000472282 FMNL3Q8IVF7 1028 aa9.55□□□□□ -0.88
SMC4-213ENST00000472282 BBS7Q8IWZ6 715 aa9.55□□□□□ -0.88
SMC4-213ENST00000472282 SIX6OS1Q8N1H7 587 aa9.55□□□□□ -0.88
SMC4-213ENST00000472282 WDTC1Q8N5D0 677 aa9.55□□□□□ -0.88
SMC4-213ENST00000472282 USP33Q8TEY7 942 aa9.55□□□□□ -0.88
SMC4-213ENST00000472282 GAB3Q8WWW8 586 aa9.55□□□□□ -0.88
SMC4-213ENST00000472282 KCTD13Q8WZ19 329 aa9.55□□□□□ -0.88
SMC4-213ENST00000472282 OVCA2Q8WZ82 227 aa9.55□□□□□ -0.88
SMC4-213ENST00000472282 NDRG1Q92597 394 aaKnown RBP9.55□□□□□ -0.88
SMC4-213ENST00000472282 HSFY1Q96LI6 401 aa9.55□□□□□ -0.88
SMC4-213ENST00000472282 NMUR1Q9HB89 426 aa9.55□□□□□ -0.88
SMC4-213ENST00000472282 SEMA4GQ9NTN9 838 aa9.55□□□□□ -0.88
SMC4-213ENST00000472282 TJP2Q9UDY2 1190 aa9.55□□□□□ -0.88
SMC4-213ENST00000472282 NUDT5Q9UKK9 219 aa9.55□□□□□ -0.88
SMC4-213ENST00000472282 RAB23Q9ULC3 237 aa9.55□□□□□ -0.88
SMC4-213ENST00000472282 CAPN11Q9UMQ6 739 aa9.55□□□□□ -0.88
SMC4-213ENST00000472282 SCML2Q9UQR0 700 aa9.55□□□□□ -0.88
SMC4-213ENST00000472282 CEP83Q9Y592 693 aa9.55□□□□□ -0.88
SMC4-213ENST00000472282 USP3Q9Y6I4 520 aa9.55□□□□□ -0.88
SMC4-213ENST00000472282 CEP250Q9BV73 2442 aa9.55□□□□□ -0.88
SMC4-213ENST00000472282 A0A1W2PQH9 124 aa9.54□□□□□ -0.88
SMC4-213ENST00000472282 DCDC2BA2VCK2 349 aa9.54□□□□□ -0.88
SMC4-213ENST00000472282 E5RJQ4 531 aa9.54□□□□□ -0.88
SMC4-213ENST00000472282 MDM4O15151 490 aa9.54□□□□□ -0.88
SMC4-213ENST00000472282 TRIM24O15164 1050 aa9.54□□□□□ -0.88
SMC4-213ENST00000472282 GREM1O60565 184 aa9.54□□□□□ -0.88
SMC4-213ENST00000472282 ATG13O75143 517 aa9.54□□□□□ -0.88
SMC4-213ENST00000472282 RPP40O75818 363 aaKnown RBP9.54□□□□□ -0.88
SMC4-213ENST00000472282 TBX18O95935 607 aa9.54□□□□□ -0.88
SMC4-213ENST00000472282 ZBED1O96006 694 aa9.54□□□□□ -0.88
SMC4-213ENST00000472282 CCDC172P0C7W6 258 aa9.54□□□□□ -0.88
SMC4-213ENST00000472282 IRF1P10914 325 aa9.54□□□□□ -0.88
SMC4-213ENST00000472282 CDH5P33151 784 aaPredicted RBP9.54□□□□□ -0.88
SMC4-213ENST00000472282 RPL34P49207 117 aaKnown RBP9.54□□□□□ -0.88
SMC4-213ENST00000472282 DAOAP59103 153 aa9.54□□□□□ -0.88
SMC4-213ENST00000472282 NOMO3P69849 1222 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms