RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 ADAMTS1Q9UHI8 967 aa20.49■□□□□ 0.87
HDAC7-220ENST00000471235 A0A087X0T9 212 aa20.48■□□□□ 0.87
HDAC7-220ENST00000471235 SIGLEC16A6NMB1 481 aa20.48■□□□□ 0.87
HDAC7-220ENST00000471235 RNF40O75150 1001 aa20.48■□□□□ 0.87
HDAC7-220ENST00000471235 FAM228BP0C875 321 aa20.48■□□□□ 0.87
HDAC7-220ENST00000471235 PDGFRAP16234 1089 aa20.48■□□□□ 0.87
HDAC7-220ENST00000471235 SDC4P31431 198 aa20.48■□□□□ 0.87
HDAC7-220ENST00000471235 RDXP35241 583 aaKnown RBP20.48■□□□□ 0.87
HDAC7-220ENST00000471235 RFC1P35251 1148 aaPredicted RBP20.48■□□□□ 0.87
HDAC7-220ENST00000471235 EIF4A3P38919 411 aaKnown RBP20.48■□□□□ 0.87
HDAC7-220ENST00000471235 PTPN9P43378 593 aa20.48■□□□□ 0.87
HDAC7-220ENST00000471235 MTAPQ13126 283 aa20.48■□□□□ 0.87
HDAC7-220ENST00000471235 C15orf59Q2T9L4 293 aaPredicted RBP20.48■□□□□ 0.87
HDAC7-220ENST00000471235 CCDC14Q49A88 953 aa20.48■□□□□ 0.87
HDAC7-220ENST00000471235 BRMS1LQ5PSV4 323 aa20.48■□□□□ 0.87
HDAC7-220ENST00000471235 PIK3R6Q5UE93 754 aa20.48■□□□□ 0.87
HDAC7-220ENST00000471235 RAP1GAP2Q684P5 730 aa20.48■□□□□ 0.87
HDAC7-220ENST00000471235 PKN3Q6P5Z2 889 aa20.48■□□□□ 0.87
HDAC7-220ENST00000471235 CHSY1Q86X52 802 aa20.48■□□□□ 0.87
HDAC7-220ENST00000471235 CNGA4Q8IV77 575 aa20.48■□□□□ 0.87
HDAC7-220ENST00000471235 SYNPOQ8N3V7 929 aa20.48■□□□□ 0.87
HDAC7-220ENST00000471235 TERB1Q8NA31 727 aa20.48■□□□□ 0.87
HDAC7-220ENST00000471235 ZNF653Q96CK0 615 aa20.48■□□□□ 0.87
HDAC7-220ENST00000471235 MCEEQ96PE7 176 aa20.48■□□□□ 0.87
HDAC7-220ENST00000471235 IRX2Q9BZI1 471 aaPredicted RBP20.48■□□□□ 0.87
HDAC7-220ENST00000471235 ISCUQ9H1K1 167 aa20.48■□□□□ 0.87
HDAC7-220ENST00000471235 ANLNQ9NQW6 1124 aa20.48■□□□□ 0.87
HDAC7-220ENST00000471235 SPATA6Q9NWH7 488 aaPredicted RBP20.48■□□□□ 0.87
HDAC7-220ENST00000471235 FBXO10Q9UK96 956 aa20.48■□□□□ 0.87
HDAC7-220ENST00000471235 NENFQ9UMX5 172 aa20.48■□□□□ 0.87
HDAC7-220ENST00000471235 HCN4Q9Y3Q4 1203 aa20.48■□□□□ 0.87
HDAC7-220ENST00000471235 ANTXRLA6NF34 631 aa20.47■□□□□ 0.87
HDAC7-220ENST00000471235 AKR1B15C9JRZ8 316 aaPredicted RBP20.47■□□□□ 0.87
HDAC7-220ENST00000471235 K7EQS6 105 aa20.47■□□□□ 0.87
HDAC7-220ENST00000471235 ADCY5O95622 1261 aa20.47■□□□□ 0.87
HDAC7-220ENST00000471235 F9P00740 461 aa20.47■□□□□ 0.87
HDAC7-220ENST00000471235 CHRM1P11229 460 aaPredicted RBP20.47■□□□□ 0.87
HDAC7-220ENST00000471235 ABCB4P21439 1286 aa20.47■□□□□ 0.87
HDAC7-220ENST00000471235 TACR2P21452 398 aa20.47■□□□□ 0.87
HDAC7-220ENST00000471235 GPD1P21695 349 aa20.47■□□□□ 0.87
HDAC7-220ENST00000471235 DGKGP49619 791 aa20.47■□□□□ 0.87
HDAC7-220ENST00000471235 RPL7AP62424 266 aaKnown RBP20.47■□□□□ 0.87
HDAC7-220ENST00000471235 ATP11AP98196 1134 aa20.47■□□□□ 0.87
HDAC7-220ENST00000471235 CDO1Q16878 200 aa20.47■□□□□ 0.87
HDAC7-220ENST00000471235 FBXO43Q4G163 708 aa20.47■□□□□ 0.87
HDAC7-220ENST00000471235 RAB6CQ53S08 254 aa20.47■□□□□ 0.87
HDAC7-220ENST00000471235 MS4A13Q5J8X5 152 aa20.47■□□□□ 0.87
HDAC7-220ENST00000471235 RNF43Q68DV7 783 aa20.47■□□□□ 0.87
HDAC7-220ENST00000471235 PLEKHA7Q6IQ23 1121 aa20.47■□□□□ 0.87
HDAC7-220ENST00000471235 SND1Q7KZF4 910 aaKnown RBP eCLIP20.47■□□□□ 0.87
HDAC7-220ENST00000471235 HJURPQ8NCD3 748 aaPredicted RBP20.47■□□□□ 0.87
HDAC7-220ENST00000471235 TRIM11Q96F44 468 aa20.47■□□□□ 0.87
HDAC7-220ENST00000471235 PRMT1Q99873 361 aaKnown RBP20.47■□□□□ 0.87
HDAC7-220ENST00000471235 RAB6CQ9H0N0 254 aa20.47■□□□□ 0.87
HDAC7-220ENST00000471235 ARHGEF38Q9NXL2 777 aa20.47■□□□□ 0.87
HDAC7-220ENST00000471235 RAPGEFL1Q9UHV5 662 aa20.47■□□□□ 0.87
HDAC7-220ENST00000471235 SLC12A6Q9UHW9 1150 aa20.47■□□□□ 0.87
HDAC7-220ENST00000471235 CLEC4EQ9ULY5 219 aa20.47■□□□□ 0.87
HDAC7-220ENST00000471235 CKAP5Q14008 2032 aa20.47■□□□□ 0.87
HDAC7-220ENST00000471235 MUC6Q6W4X9 2439 aa20.46■□□□□ 0.87
HDAC7-220ENST00000471235 I6L893 689 aaPredicted RBP20.46■□□□□ 0.87
HDAC7-220ENST00000471235 TBL1XO60907 577 aa20.46■□□□□ 0.87
HDAC7-220ENST00000471235 ENDOD1O94919 500 aa20.46■□□□□ 0.87
HDAC7-220ENST00000471235 CISD3P0C7P0 127 aa20.46■□□□□ 0.87
HDAC7-220ENST00000471235 COL9A1P20849 921 aa20.46■□□□□ 0.87
HDAC7-220ENST00000471235 GRIA2P42262 883 aa20.46■□□□□ 0.87
HDAC7-220ENST00000471235 SEC13P55735 322 aa20.46■□□□□ 0.87
HDAC7-220ENST00000471235 MAPK8IP2Q13387 824 aaPredicted RBP20.46■□□□□ 0.87
HDAC7-220ENST00000471235 SH3PXD2AQ5TCZ1 1133 aa20.46■□□□□ 0.87
HDAC7-220ENST00000471235 LGI2Q8N0V4 545 aa20.46■□□□□ 0.87
HDAC7-220ENST00000471235 TMA16Q96EY4 203 aaKnown RBP20.46■□□□□ 0.87
HDAC7-220ENST00000471235 TKTL2Q9H0I9 626 aa20.46■□□□□ 0.87
HDAC7-220ENST00000471235 PARVAQ9NVD7 372 aa20.46■□□□□ 0.87
HDAC7-220ENST00000471235 ZNHIT6Q9NWK9 470 aaKnown RBP20.46■□□□□ 0.87
HDAC7-220ENST00000471235 CNOT8Q9UFF9 292 aaKnown RBP20.46■□□□□ 0.87
HDAC7-220ENST00000471235 CHD5Q8TDI0 1954 aa20.46■□□□□ 0.87
HDAC7-220ENST00000471235 A0A0A0MRY4 1105 aa20.45■□□□□ 0.86
HDAC7-220ENST00000471235 SSU72P8A0A1W2PR75 194 aa20.45■□□□□ 0.86
HDAC7-220ENST00000471235 F5H5T6 163 aa20.45■□□□□ 0.86
HDAC7-220ENST00000471235 CCP110O43303 1012 aa20.45■□□□□ 0.86
HDAC7-220ENST00000471235 PAGE1O75459 146 aa20.45■□□□□ 0.86
HDAC7-220ENST00000471235 GGCXP38435 758 aa20.45■□□□□ 0.86
HDAC7-220ENST00000471235 RPS24P62847 133 aaKnown RBP20.45■□□□□ 0.86
HDAC7-220ENST00000471235 OGDHQ02218 1023 aa20.45■□□□□ 0.86
HDAC7-220ENST00000471235 MAMLD1Q13495 774 aa20.45■□□□□ 0.86
HDAC7-220ENST00000471235 PREPLQ4J6C6 727 aaPredicted RBP20.45■□□□□ 0.86
HDAC7-220ENST00000471235 C10orf76Q5T2E6 689 aa20.45■□□□□ 0.86
HDAC7-220ENST00000471235 DCUN1D2Q6PH85 259 aa20.45■□□□□ 0.86
HDAC7-220ENST00000471235 STRADAQ7RTN6 431 aa20.45■□□□□ 0.86
HDAC7-220ENST00000471235 FAM131BQ86XD5 332 aa20.45■□□□□ 0.86
HDAC7-220ENST00000471235 C1orf210Q8IVY1 113 aa20.45■□□□□ 0.86
HDAC7-220ENST00000471235 SPEM1Q8N4L4 309 aa20.45■□□□□ 0.86
HDAC7-220ENST00000471235 TC2NQ8N9U0 490 aa20.45■□□□□ 0.86
HDAC7-220ENST00000471235 RPLP0P6Q8NHW5 317 aa20.45■□□□□ 0.86
HDAC7-220ENST00000471235 FAM172AQ8WUF8 416 aa20.45■□□□□ 0.86
HDAC7-220ENST00000471235 PRRX2Q99811 253 aa20.45■□□□□ 0.86
HDAC7-220ENST00000471235 KCNH6Q9H252 994 aa20.45■□□□□ 0.86
HDAC7-220ENST00000471235 WDCPQ9H6R7 721 aa20.45■□□□□ 0.86
HDAC7-220ENST00000471235 PRMT8Q9NR22 394 aaPredicted RBP20.45■□□□□ 0.86
HDAC7-220ENST00000471235 TMPRSS4Q9NRS4 437 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms