RNA–Protein interactions for RNA: ENST00000467246.5

HPS1-208, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best)

Gene HPS1, Length 2,791 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-208ENST00000467246 WDR6Q9NNW5 1121 aaKnown RBP11.79□□□□□ -0.52
HPS1-208ENST00000467246 PIH1D1Q9NWS0 290 aaKnown RBP11.79□□□□□ -0.52
HPS1-208ENST00000467246 SEPT10Q9P0V9 454 aa11.79□□□□□ -0.52
HPS1-208ENST00000467246 KLHL14Q9P2G3 628 aa11.79□□□□□ -0.52
HPS1-208ENST00000467246 CDH9Q9ULB4 789 aa11.79□□□□□ -0.52
HPS1-208ENST00000467246 ZNF638Q14966 1978 aaKnown RBP11.79□□□□□ -0.52
HPS1-208ENST00000467246 RNF103O00237 685 aa11.79□□□□□ -0.52
HPS1-208ENST00000467246 EEF2KO00418 725 aaKnown RBP11.79□□□□□ -0.52
HPS1-208ENST00000467246 RASSF9O75901 435 aa11.79□□□□□ -0.52
HPS1-208ENST00000467246 TOMM70O94826 608 aa11.79□□□□□ -0.52
HPS1-208ENST00000467246 FBXO21O94952 628 aa11.79□□□□□ -0.52
HPS1-208ENST00000467246 APOEP02649 317 aa11.79□□□□□ -0.52
HPS1-208ENST00000467246 PRKCHP24723 683 aa11.79□□□□□ -0.52
HPS1-208ENST00000467246 CRADDP78560 199 aa11.79□□□□□ -0.52
HPS1-208ENST00000467246 SREBF2Q12772 1141 aa11.79□□□□□ -0.52
HPS1-208ENST00000467246 DPYSQ14117 519 aa11.79□□□□□ -0.52
HPS1-208ENST00000467246 SEPT7Q16181 437 aaKnown RBP11.79□□□□□ -0.52
HPS1-208ENST00000467246 PDCD7Q8N8D1 485 aaKnown RBP11.79□□□□□ -0.52
HPS1-208ENST00000467246 GIMAP7Q8NHV1 300 aa11.79□□□□□ -0.52
HPS1-208ENST00000467246 GRAMD1AQ96CP6 724 aa11.79□□□□□ -0.52
HPS1-208ENST00000467246 EBNA1BP2Q99848 306 aaKnown RBP11.79□□□□□ -0.52
HPS1-208ENST00000467246 CNGB3Q9NQW8 809 aa11.79□□□□□ -0.52
HPS1-208ENST00000467246 DONSONQ9NYP3 566 aa11.79□□□□□ -0.52
HPS1-208ENST00000467246 INPP5FQ9Y2H2 1132 aa11.79□□□□□ -0.52
HPS1-208ENST00000467246 STARD13Q9Y3M8 1113 aa11.79□□□□□ -0.52
HPS1-208ENST00000467246 EIF4E1BA6NMX2 242 aaKnown RBP11.79□□□□□ -0.52
HPS1-208ENST00000467246 HACD1B0YJ81 288 aa11.79□□□□□ -0.52
HPS1-208ENST00000467246 TRIM49D1C9J1S8 452 aa11.79□□□□□ -0.52
HPS1-208ENST00000467246 F8W810 466 aa11.79□□□□□ -0.52
HPS1-208ENST00000467246 LPXNO60711 386 aa11.79□□□□□ -0.52
HPS1-208ENST00000467246 EDF1O60869 148 aaKnown RBP11.79□□□□□ -0.52
HPS1-208ENST00000467246 CAPN15O75808 1086 aa11.79□□□□□ -0.52
HPS1-208ENST00000467246 DNAJC8O75937 253 aaPredicted RBP11.79□□□□□ -0.52
HPS1-208ENST00000467246 RPL9P32969 192 aaKnown RBP11.79□□□□□ -0.52
HPS1-208ENST00000467246 PRKD1Q15139 912 aaPredicted RBP11.79□□□□□ -0.52
HPS1-208ENST00000467246 GALNTL6Q49A17 601 aa11.79□□□□□ -0.52
HPS1-208ENST00000467246 BZW1Q7L1Q6 419 aaKnown RBP11.79□□□□□ -0.52
HPS1-208ENST00000467246 BHLHA9Q7RTU4 235 aa11.79□□□□□ -0.52
HPS1-208ENST00000467246 RPAINQ86UA6 219 aa11.79□□□□□ -0.52
HPS1-208ENST00000467246 ANKLE1Q8NAG6 615 aa11.79□□□□□ -0.52
HPS1-208ENST00000467246 MYLPFQ96A32 169 aa11.79□□□□□ -0.52
HPS1-208ENST00000467246 ALKBH8Q96BT7 664 aaKnown RBP11.79□□□□□ -0.52
HPS1-208ENST00000467246 LRRC39Q96DD0 335 aa11.79□□□□□ -0.52
HPS1-208ENST00000467246 DDIT4Q9NX09 232 aa11.79□□□□□ -0.52
HPS1-208ENST00000467246 TRDMT1O14717 391 aaKnown RBP11.78□□□□□ -0.52
HPS1-208ENST00000467246 TM9SF1O15321 606 aa11.78□□□□□ -0.52
HPS1-208ENST00000467246 ZNF623O75123 536 aa11.78□□□□□ -0.52
HPS1-208ENST00000467246 LTFP02788 710 aa11.78□□□□□ -0.52
HPS1-208ENST00000467246 GSTA1P08263 222 aa11.78□□□□□ -0.52
HPS1-208ENST00000467246 CSH1P0DML2 217 aa11.78□□□□□ -0.52
HPS1-208ENST00000467246 CSH2P0DML3 217 aa11.78□□□□□ -0.52
HPS1-208ENST00000467246 BDNFP23560 247 aa11.78□□□□□ -0.52
HPS1-208ENST00000467246 WASHC5Q12768 1159 aa11.78□□□□□ -0.52
HPS1-208ENST00000467246 LPIN1Q14693 890 aa11.78□□□□□ -0.52
HPS1-208ENST00000467246 CD300LGQ6UXG3 332 aa11.78□□□□□ -0.52
HPS1-208ENST00000467246 UNC5BQ8IZJ1 945 aa11.78□□□□□ -0.52
HPS1-208ENST00000467246 PTPRN2Q92932 1015 aa11.78□□□□□ -0.52
HPS1-208ENST00000467246 SMARCD1Q96GM5 515 aa11.78□□□□□ -0.52
HPS1-208ENST00000467246 TMEM209Q96SK2 561 aa11.78□□□□□ -0.52
HPS1-208ENST00000467246 ADAM2Q99965 735 aa11.78□□□□□ -0.52
HPS1-208ENST00000467246 TRMT13Q9NUP7 481 aaKnown RBP11.78□□□□□ -0.52
HPS1-208ENST00000467246 TMLHEQ9NVH6 421 aa11.78□□□□□ -0.52
HPS1-208ENST00000467246 FBXW11Q9UKB1 542 aa11.78□□□□□ -0.52
HPS1-208ENST00000467246 SNX10Q9Y5X0 201 aa11.78□□□□□ -0.52
HPS1-208ENST00000467246 PTCH2Q9Y6C5 1203 aa11.78□□□□□ -0.52
HPS1-208ENST00000467246 A0A0U1RQF3 1178 aa11.78□□□□□ -0.52
HPS1-208ENST00000467246 KCNK1O00180 336 aa11.78□□□□□ -0.52
HPS1-208ENST00000467246 DCLK1O15075 740 aa11.78□□□□□ -0.52
HPS1-208ENST00000467246 ITGB1P05556 798 aa11.78□□□□□ -0.52
HPS1-208ENST00000467246 ELNP15502 786 aa11.78□□□□□ -0.52
HPS1-208ENST00000467246 ERCC2P18074 760 aa11.78□□□□□ -0.52
HPS1-208ENST00000467246 PCSK1P29120 753 aa11.78□□□□□ -0.52
HPS1-208ENST00000467246 TM4SF4P48230 202 aa11.78□□□□□ -0.52
HPS1-208ENST00000467246 SLC18A2Q05940 514 aa11.78□□□□□ -0.52
HPS1-208ENST00000467246 BMPR2Q13873 1038 aa11.78□□□□□ -0.52
HPS1-208ENST00000467246 PAFAH1B3Q15102 231 aaKnown RBP11.78□□□□□ -0.52
HPS1-208ENST00000467246 TTC39BQ5VTQ0 682 aaPredicted RBP11.78□□□□□ -0.52
HPS1-208ENST00000467246 RNF43Q68DV7 783 aa11.78□□□□□ -0.52
HPS1-208ENST00000467246 CDHR3Q6ZTQ4 885 aa11.78□□□□□ -0.52
HPS1-208ENST00000467246 OTOAQ7RTW8 1153 aa11.78□□□□□ -0.52
HPS1-208ENST00000467246 FAM111AQ96PZ2 611 aa11.78□□□□□ -0.52
HPS1-208ENST00000467246 SLC9A7Q96T83 725 aa11.78□□□□□ -0.52
HPS1-208ENST00000467246 XAB2Q9HCS7 855 aaKnown RBP11.78□□□□□ -0.52
HPS1-208ENST00000467246 TSC2P49815 1807 aa11.77□□□□□ -0.52
HPS1-208ENST00000467246 WDR27A2RRH5 827 aa11.77□□□□□ -0.53
HPS1-208ENST00000467246 C9IYK1 514 aa11.77□□□□□ -0.53
HPS1-208ENST00000467246 PSMB4P28070 264 aa11.77□□□□□ -0.53
HPS1-208ENST00000467246 GLUD2P49448 558 aa11.77□□□□□ -0.53
HPS1-208ENST00000467246 NEK3P51956 506 aa11.77□□□□□ -0.53
HPS1-208ENST00000467246 SEMA3BQ13214 749 aa11.77□□□□□ -0.53
HPS1-208ENST00000467246 DSC3Q14574 896 aa11.77□□□□□ -0.53
HPS1-208ENST00000467246 PDK1Q15118 436 aa11.77□□□□□ -0.53
HPS1-208ENST00000467246 LRRTM3Q86VH5 581 aa11.77□□□□□ -0.53
HPS1-208ENST00000467246 ZNF567Q8N184 647 aa11.77□□□□□ -0.53
HPS1-208ENST00000467246 GSDMBQ8TAX9 411 aa11.77□□□□□ -0.53
HPS1-208ENST00000467246 TBC1D31Q96DN5 1066 aa11.77□□□□□ -0.53
HPS1-208ENST00000467246 APOPT1Q96IL0 206 aa11.77□□□□□ -0.53
HPS1-208ENST00000467246 RXFP1Q9HBX9 757 aa11.77□□□□□ -0.53
HPS1-208ENST00000467246 CSNK1G1Q9HCP0 422 aa11.77□□□□□ -0.53
HPS1-208ENST00000467246 KLC4Q9NSK0 619 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms