RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 A0A087WZ62 844 aa4.78□□□□□ -1.64
ITGB1-208ENST00000464001 TMEM272A0A1B0GTI8 110 aa4.78□□□□□ -1.64
ITGB1-208ENST00000464001 ZSCAN9O15535 394 aaPredicted RBP4.78□□□□□ -1.64
ITGB1-208ENST00000464001 KCNQ3O43525 872 aa4.78□□□□□ -1.64
ITGB1-208ENST00000464001 IDEP14735 1019 aa4.78□□□□□ -1.64
ITGB1-208ENST00000464001 GNALP38405 381 aa4.78□□□□□ -1.64
ITGB1-208ENST00000464001 GSTM5P46439 218 aa4.78□□□□□ -1.64
ITGB1-208ENST00000464001 SOX2P48431 317 aa4.78□□□□□ -1.64
ITGB1-208ENST00000464001 ZNF84P51523 738 aa4.78□□□□□ -1.64
ITGB1-208ENST00000464001 PGGT1BP53609 377 aa4.78□□□□□ -1.64
ITGB1-208ENST00000464001 SETQ01105 290 aaPredicted RBP4.78□□□□□ -1.64
ITGB1-208ENST00000464001 DLGAP5Q15398 846 aa4.78□□□□□ -1.64
ITGB1-208ENST00000464001 CYB5RLQ6IPT4 315 aa4.78□□□□□ -1.64
ITGB1-208ENST00000464001 ACSM6Q6P461 480 aa4.78□□□□□ -1.64
ITGB1-208ENST00000464001 CLEC4GQ6UXB4 293 aa4.78□□□□□ -1.64
ITGB1-208ENST00000464001 KYAT3Q6YP21 454 aaKnown RBP4.78□□□□□ -1.64
ITGB1-208ENST00000464001 BEND5Q7L4P6 421 aa4.78□□□□□ -1.64
ITGB1-208ENST00000464001 TRAPPC11Q7Z392 1133 aa4.78□□□□□ -1.64
ITGB1-208ENST00000464001 CLASRPQ8N2M8 674 aaKnown RBP4.78□□□□□ -1.64
ITGB1-208ENST00000464001 SPATA3Q8NHX4 192 aa4.78□□□□□ -1.64
ITGB1-208ENST00000464001 TTC8Q8TAM2 541 aa4.78□□□□□ -1.64
ITGB1-208ENST00000464001 TTC17Q96AE7 1141 aa4.78□□□□□ -1.64
ITGB1-208ENST00000464001 ZPBPQ9BS86 351 aa4.78□□□□□ -1.64
ITGB1-208ENST00000464001 HTATIP2Q9BUP3 242 aa4.78□□□□□ -1.64
ITGB1-208ENST00000464001 ERVK-5Q9HDB9 667 aa4.78□□□□□ -1.64
ITGB1-208ENST00000464001 FZD3Q9NPG1 666 aa4.78□□□□□ -1.64
ITGB1-208ENST00000464001 THSD1Q9NS62 852 aa4.78□□□□□ -1.64
ITGB1-208ENST00000464001 ANAPC4Q9UJX5 808 aa4.78□□□□□ -1.64
ITGB1-208ENST00000464001 KIR2DS5A0A0G2JLQ3 304 aa4.77□□□□□ -1.65
ITGB1-208ENST00000464001 CCDC189A1A4V9 331 aa4.77□□□□□ -1.65
ITGB1-208ENST00000464001 LACTBL1A8MY62 500 aa4.77□□□□□ -1.65
ITGB1-208ENST00000464001 HMGB1P1B2RPK0 211 aaPredicted RBP4.77□□□□□ -1.65
ITGB1-208ENST00000464001 KIR2DS3K7RE56 304 aa4.77□□□□□ -1.65
ITGB1-208ENST00000464001 SGPL1O95470 568 aa4.77□□□□□ -1.65
ITGB1-208ENST00000464001 TGFB3P10600 412 aa4.77□□□□□ -1.65
ITGB1-208ENST00000464001 MYL4P12829 197 aa4.77□□□□□ -1.65
ITGB1-208ENST00000464001 AKR1A1P14550 325 aa4.77□□□□□ -1.65
ITGB1-208ENST00000464001 SLC8A1P32418 973 aa4.77□□□□□ -1.65
ITGB1-208ENST00000464001 KCNJ4P48050 445 aa4.77□□□□□ -1.65
ITGB1-208ENST00000464001 GALEQ14376 348 aa4.77□□□□□ -1.65
ITGB1-208ENST00000464001 PTGR1Q14914 329 aa4.77□□□□□ -1.65
ITGB1-208ENST00000464001 ELF2Q15723 593 aa4.77□□□□□ -1.65
ITGB1-208ENST00000464001 CCDC144NLQ6NUI1 221 aa4.77□□□□□ -1.65
ITGB1-208ENST00000464001 DHRS13Q6UX07 377 aa4.77□□□□□ -1.65
ITGB1-208ENST00000464001 C14orf80Q86SX3 495 aa4.77□□□□□ -1.65
ITGB1-208ENST00000464001 ADHFE1Q8IWW8 467 aa4.77□□□□□ -1.65
ITGB1-208ENST00000464001 TMEM199Q8N511 208 aa4.77□□□□□ -1.65
ITGB1-208ENST00000464001 EIF3CQ99613 913 aaKnown RBP4.77□□□□□ -1.65
ITGB1-208ENST00000464001 TMEM204Q9BSN7 226 aa4.77□□□□□ -1.65
ITGB1-208ENST00000464001 CHST12Q9NRB3 414 aa4.77□□□□□ -1.65
ITGB1-208ENST00000464001 A0A1W2PPC1 479 aa4.76□□□□□ -1.65
ITGB1-208ENST00000464001 PQBP1O60828 265 aaKnown RBP4.76□□□□□ -1.65
ITGB1-208ENST00000464001 LDHAP00338 332 aaKnown RBP4.76□□□□□ -1.65
ITGB1-208ENST00000464001 POLD2P49005 469 aa4.76□□□□□ -1.65
ITGB1-208ENST00000464001 AGTR2P50052 363 aa4.76□□□□□ -1.65
ITGB1-208ENST00000464001 PPATQ06203 517 aa4.76□□□□□ -1.65
ITGB1-208ENST00000464001 ANXA2RQ3ZCQ2 193 aa4.76□□□□□ -1.65
ITGB1-208ENST00000464001 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.76□□□□□ -1.65
ITGB1-208ENST00000464001 SYCP2LQ5T4T6 812 aa4.76□□□□□ -1.65
ITGB1-208ENST00000464001 LIPMQ5VYY2 423 aa4.76□□□□□ -1.65
ITGB1-208ENST00000464001 RHPN2Q8IUC4 686 aa4.76□□□□□ -1.65
ITGB1-208ENST00000464001 CCDC28AQ8IWP9 274 aa4.76□□□□□ -1.65
ITGB1-208ENST00000464001 FAM9BQ8IZU0 186 aa4.76□□□□□ -1.65
ITGB1-208ENST00000464001 ARL14EPQ8N8R7 260 aaPredicted RBP4.76□□□□□ -1.65
ITGB1-208ENST00000464001 B4GALNT2Q8NHY0 566 aa4.76□□□□□ -1.65
ITGB1-208ENST00000464001 GLMPQ8WWB7 406 aa4.76□□□□□ -1.65
ITGB1-208ENST00000464001 ASB12Q8WXK4 309 aa4.76□□□□□ -1.65
ITGB1-208ENST00000464001 GRAMD1AQ96CP6 724 aa4.76□□□□□ -1.65
ITGB1-208ENST00000464001 MSI2Q96DH6 328 aaKnown RBP4.76□□□□□ -1.65
ITGB1-208ENST00000464001 MPHOSPH6Q99547 160 aaKnown RBP4.76□□□□□ -1.65
ITGB1-208ENST00000464001 PIMREGQ9BSJ6 248 aa4.76□□□□□ -1.65
ITGB1-208ENST00000464001 CDCP1Q9H5V8 836 aa4.76□□□□□ -1.65
ITGB1-208ENST00000464001 TRIP12Q14669 1992 aaPredicted RBP4.75□□□□□ -1.65
ITGB1-208ENST00000464001 DPPA5A6NC42 116 aa4.75□□□□□ -1.65
ITGB1-208ENST00000464001 POM121BA6NF01 834 aa4.75□□□□□ -1.65
ITGB1-208ENST00000464001 GTPBP1O00178 669 aaKnown RBP4.75□□□□□ -1.65
ITGB1-208ENST00000464001 ATF3P18847 181 aa4.75□□□□□ -1.65
ITGB1-208ENST00000464001 FGFR2P21802 821 aa4.75□□□□□ -1.65
ITGB1-208ENST00000464001 MST1P26927 711 aa4.75□□□□□ -1.65
ITGB1-208ENST00000464001 STAT6P42226 847 aa4.75□□□□□ -1.65
ITGB1-208ENST00000464001 ZNF543Q08ER8 600 aa4.75□□□□□ -1.65
ITGB1-208ENST00000464001 DMWDQ09019 674 aa4.75□□□□□ -1.65
ITGB1-208ENST00000464001 ATP1A4Q13733 1029 aa4.75□□□□□ -1.65
ITGB1-208ENST00000464001 DHX8Q14562 1220 aaKnown RBP4.75□□□□□ -1.65
ITGB1-208ENST00000464001 SMTNL2Q2TAL5 461 aa4.75□□□□□ -1.65
ITGB1-208ENST00000464001 KLHDC7AQ5VTJ3 777 aa4.75□□□□□ -1.65
ITGB1-208ENST00000464001 ISM2Q6H9L7 571 aa4.75□□□□□ -1.65
ITGB1-208ENST00000464001 CCSAPQ6IQ19 270 aaPredicted RBP4.75□□□□□ -1.65
ITGB1-208ENST00000464001 PDXDC1Q6P996 788 aa4.75□□□□□ -1.65
ITGB1-208ENST00000464001 KIAA0408Q6ZU52 694 aa4.75□□□□□ -1.65
ITGB1-208ENST00000464001 LAS2Q8IYD9 372 aa4.75□□□□□ -1.65
ITGB1-208ENST00000464001 FAM47BQ8NA70 645 aa4.75□□□□□ -1.65
ITGB1-208ENST00000464001 ASB5Q8WWX0 329 aa4.75□□□□□ -1.65
ITGB1-208ENST00000464001 CENPIQ92674 756 aaPredicted RBP4.75□□□□□ -1.65
ITGB1-208ENST00000464001 SNX27Q96L92 541 aa4.75□□□□□ -1.65
ITGB1-208ENST00000464001 NUDT22Q9BRQ3 303 aa4.75□□□□□ -1.65
ITGB1-208ENST00000464001 ZNF112Q9UJU3 913 aa4.75□□□□□ -1.65
ITGB1-208ENST00000464001 ZMYND8Q9ULU4 1186 aaPredicted RBP4.75□□□□□ -1.65
ITGB1-208ENST00000464001 COMMD10Q9Y6G5 202 aa4.75□□□□□ -1.65
ITGB1-208ENST00000464001 RPS6KL1Q9Y6S9 549 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms