RNA–Protein interactions for RNA: ENST00000463503.5

SSR3-202, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 596 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-202ENST00000463503 SIK3Q9Y2K2 1263 aa11.71□□□□□ -0.53
SSR3-202ENST00000463503 NME7Q9Y5B8 376 aa11.71□□□□□ -0.53
SSR3-202ENST00000463503 SNX9Q9Y5X1 595 aa11.71□□□□□ -0.53
SSR3-202ENST00000463503 F8VP50 259 aa11.7□□□□□ -0.54
SSR3-202ENST00000463503 BCAT2O15382 392 aaPredicted RBP11.7□□□□□ -0.54
SSR3-202ENST00000463503 COCHO43405 550 aa11.7□□□□□ -0.54
SSR3-202ENST00000463503 CACNG3O60359 315 aa11.7□□□□□ -0.54
SSR3-202ENST00000463503 TACC1O75410 805 aa11.7□□□□□ -0.54
SSR3-202ENST00000463503 TPM3P06753 285 aa11.7□□□□□ -0.54
SSR3-202ENST00000463503 KRT19P08727 400 aa11.7□□□□□ -0.54
SSR3-202ENST00000463503 MBL2P11226 248 aaPredicted RBP11.7□□□□□ -0.54
SSR3-202ENST00000463503 P4HA1P13674 534 aa11.7□□□□□ -0.54
SSR3-202ENST00000463503 TBXAS1P24557 533 aaPredicted RBP11.7□□□□□ -0.54
SSR3-202ENST00000463503 LMO2P25791 158 aa11.7□□□□□ -0.54
SSR3-202ENST00000463503 PON1P27169 355 aa11.7□□□□□ -0.54
SSR3-202ENST00000463503 GRIK1P39086 918 aa11.7□□□□□ -0.54
SSR3-202ENST00000463503 LHX1P48742 406 aa11.7□□□□□ -0.54
SSR3-202ENST00000463503 GCNT1Q02742 428 aa11.7□□□□□ -0.54
SSR3-202ENST00000463503 TAF10Q12962 218 aa11.7□□□□□ -0.54
SSR3-202ENST00000463503 FIGNQ5HY92 759 aa11.7□□□□□ -0.54
SSR3-202ENST00000463503 ZNF667Q5HYK9 610 aa11.7□□□□□ -0.54
SSR3-202ENST00000463503 DCAF12L1Q5VU92 463 aa11.7□□□□□ -0.54
SSR3-202ENST00000463503 TRIM65Q6PJ69 517 aa11.7□□□□□ -0.54
SSR3-202ENST00000463503 DHRS13Q6UX07 377 aa11.7□□□□□ -0.54
SSR3-202ENST00000463503 KIAA1324Q6UXG2 1013 aaKnown RBP11.7□□□□□ -0.54
SSR3-202ENST00000463503 ENOSF1Q7L5Y1 443 aa11.7□□□□□ -0.54
SSR3-202ENST00000463503 METTL3Q86U44 580 aaKnown RBP11.7□□□□□ -0.54
SSR3-202ENST00000463503 TTC39CQ8N584 583 aa11.7□□□□□ -0.54
SSR3-202ENST00000463503 CADM4Q8NFZ8 388 aa11.7□□□□□ -0.54
SSR3-202ENST00000463503 RHBDD1Q8TEB9 315 aa11.7□□□□□ -0.54
SSR3-202ENST00000463503 IQCDQ96DY2 449 aa11.7□□□□□ -0.54
SSR3-202ENST00000463503 GPR174Q9BXC1 333 aa11.7□□□□□ -0.54
SSR3-202ENST00000463503 MMRN2Q9H8L6 949 aa11.7□□□□□ -0.54
SSR3-202ENST00000463503 CYP3A43Q9HB55 503 aa11.7□□□□□ -0.54
SSR3-202ENST00000463503 SPHK2Q9NRA0 654 aa11.7□□□□□ -0.54
SSR3-202ENST00000463503 GMIPQ9P107 970 aa11.7□□□□□ -0.54
SSR3-202ENST00000463503 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.7□□□□□ -0.54
SSR3-202ENST00000463503 ITIH6Q6UXX5 1313 aa11.69□□□□□ -0.54
SSR3-202ENST00000463503 DOPEY2Q9Y3R5 2298 aa11.69□□□□□ -0.54
SSR3-202ENST00000463503 TEX51A0A1B0GUA7 166 aa11.69□□□□□ -0.54
SSR3-202ENST00000463503 WASH3PC4AMC7 463 aa11.69□□□□□ -0.54
SSR3-202ENST00000463503 TRIM66O15016 1216 aa11.69□□□□□ -0.54
SSR3-202ENST00000463503 TEX33O43247 280 aa11.69□□□□□ -0.54
SSR3-202ENST00000463503 TNFSF14O43557 240 aa11.69□□□□□ -0.54
SSR3-202ENST00000463503 GREM1O60565 184 aa11.69□□□□□ -0.54
SSR3-202ENST00000463503 IGLV3-19P01714 112 aa11.69□□□□□ -0.54
SSR3-202ENST00000463503 CLDN6P56747 220 aa11.69□□□□□ -0.54
SSR3-202ENST00000463503 CFHR1Q03591 330 aa11.69□□□□□ -0.54
SSR3-202ENST00000463503 UBXN1Q04323 297 aa11.69□□□□□ -0.54
SSR3-202ENST00000463503 ANO4Q32M45 955 aa11.69□□□□□ -0.54
SSR3-202ENST00000463503 FUT11Q495W5 492 aa11.69□□□□□ -0.54
SSR3-202ENST00000463503 PREPLQ4J6C6 727 aaPredicted RBP11.69□□□□□ -0.54
SSR3-202ENST00000463503 BTBD8Q5XKL5 378 aa11.69□□□□□ -0.54
SSR3-202ENST00000463503 GRAMD4Q6IC98 578 aa11.69□□□□□ -0.54
SSR3-202ENST00000463503 P2RY11Q96G91 374 aa11.69□□□□□ -0.54
SSR3-202ENST00000463503 C8orf48Q96LL4 319 aa11.69□□□□□ -0.54
SSR3-202ENST00000463503 NT5C1BQ96P26 610 aa11.69□□□□□ -0.54
SSR3-202ENST00000463503 EDEM3Q9BZQ6 932 aa11.69□□□□□ -0.54
SSR3-202ENST00000463503 NIF3L1Q9GZT8 377 aa11.69□□□□□ -0.54
SSR3-202ENST00000463503 MKRN2Q9H000 416 aaKnown RBP11.69□□□□□ -0.54
SSR3-202ENST00000463503 INTS2Q9H0H0 1204 aaKnown RBP11.69□□□□□ -0.54
SSR3-202ENST00000463503 MIR1-1HGQ9H1L0 117 aa11.69□□□□□ -0.54
SSR3-202ENST00000463503 APOBEC3GQ9HC16 384 aaKnown RBP11.69□□□□□ -0.54
SSR3-202ENST00000463503 SIX2Q9NPC8 291 aa11.69□□□□□ -0.54
SSR3-202ENST00000463503 DNAJC17Q9NVM6 304 aaKnown RBP11.69□□□□□ -0.54
SSR3-202ENST00000463503 EHD2Q9NZN4 543 aa11.69□□□□□ -0.54
SSR3-202ENST00000463503 IFNKQ9P0W0 207 aa11.69□□□□□ -0.54
SSR3-202ENST00000463503 APEX2Q9UBZ4 518 aa11.69□□□□□ -0.54
SSR3-202ENST00000463503 CDH9Q9ULB4 789 aa11.69□□□□□ -0.54
SSR3-202ENST00000463503 COL27A1Q8IZC6 1860 aaPredicted RBP11.69□□□□□ -0.54
SSR3-202ENST00000463503 A0A1B0GVT2 93 aa11.68□□□□□ -0.54
SSR3-202ENST00000463503 ABL1P00519 1130 aa11.68□□□□□ -0.54
SSR3-202ENST00000463503 SLC9A1P19634 815 aa11.68□□□□□ -0.54
SSR3-202ENST00000463503 ANXA13P27216 316 aa11.68□□□□□ -0.54
SSR3-202ENST00000463503 ASPAP45381 313 aa11.68□□□□□ -0.54
SSR3-202ENST00000463503 TPMTP51580 245 aa11.68□□□□□ -0.54
SSR3-202ENST00000463503 CYP27A1Q02318 531 aa11.68□□□□□ -0.54
SSR3-202ENST00000463503 INCA1Q0VD86 236 aa11.68□□□□□ -0.54
SSR3-202ENST00000463503 KIF19Q2TAC6 998 aa11.68□□□□□ -0.54
SSR3-202ENST00000463503 WDR72Q3MJ13 1102 aa11.68□□□□□ -0.54
SSR3-202ENST00000463503 KLHDC7AQ5VTJ3 777 aa11.68□□□□□ -0.54
SSR3-202ENST00000463503 TMPRSS12Q86WS5 348 aa11.68□□□□□ -0.54
SSR3-202ENST00000463503 UBR7Q8N806 425 aa11.68□□□□□ -0.54
SSR3-202ENST00000463503 SNIP1Q8TAD8 396 aaKnown RBP11.68□□□□□ -0.54
SSR3-202ENST00000463503 MYCBPAPQ8TBZ2 947 aa11.68□□□□□ -0.54
SSR3-202ENST00000463503 MRFAP1L1Q96HT8 127 aa11.68□□□□□ -0.54
SSR3-202ENST00000463503 NUP58Q9BVL2 599 aa11.68□□□□□ -0.54
SSR3-202ENST00000463503 NAA15Q9BXJ9 866 aaKnown RBP11.68□□□□□ -0.54
SSR3-202ENST00000463503 XPO4Q9C0E2 1151 aaKnown RBP11.68□□□□□ -0.54
SSR3-202ENST00000463503 GANQ9H2C0 597 aa11.68□□□□□ -0.54
SSR3-202ENST00000463503 ITM2CQ9NQX7 267 aa11.68□□□□□ -0.54
SSR3-202ENST00000463503 MARK1Q9P0L2 795 aa11.68□□□□□ -0.54
SSR3-202ENST00000463503 EIF2B4Q9UI10 523 aaKnown RBP11.68□□□□□ -0.54
SSR3-202ENST00000463503 DNMT3LQ9UJW3 386 aa11.68□□□□□ -0.54
SSR3-202ENST00000463503 CNTN6Q9UQ52 1028 aa11.68□□□□□ -0.54
SSR3-202ENST00000463503 NBPF19A0A087WUL8 3843 aa11.67□□□□□ -0.54
SSR3-202ENST00000463503 RELNP78509 3460 aa11.67□□□□□ -0.54
SSR3-202ENST00000463503 GOLGA6L3A6NEY3 463 aa11.67□□□□□ -0.54
SSR3-202ENST00000463503 METTL12A8MUP2 240 aa11.67□□□□□ -0.54
SSR3-202ENST00000463503 NEDD8-MDP1E9PL57 170 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms