RNA–Protein interactions for RNA: ENST00000462968.2

CD46-210, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 473 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-210ENST00000462968 PTPAQ15257 358 aa3.18□□□□□ -1.9
CD46-210ENST00000462968 SMAD1Q15797 465 aaKnown RBP3.18□□□□□ -1.9
CD46-210ENST00000462968 FBXO43Q4G163 708 aa3.18□□□□□ -1.9
CD46-210ENST00000462968 C2orf27AQ580R0 203 aa3.18□□□□□ -1.9
CD46-210ENST00000462968 TMEM196Q5HYL7 178 aa3.18□□□□□ -1.9
CD46-210ENST00000462968 LYSMD4Q5XG99 296 aa3.18□□□□□ -1.9
CD46-210ENST00000462968 TWF2Q6IBS0 349 aaKnown RBP3.18□□□□□ -1.9
CD46-210ENST00000462968 LARP4Q71RC2 724 aaKnown RBP eCLIP3.18□□□□□ -1.9
CD46-210ENST00000462968 GAREM2Q75VX8 874 aa3.18□□□□□ -1.9
CD46-210ENST00000462968 HAUS6Q7Z4H7 955 aa3.18□□□□□ -1.9
CD46-210ENST00000462968 ADGRG3Q86Y34 549 aa3.18□□□□□ -1.9
CD46-210ENST00000462968 MARCH9Q86YJ5 346 aa3.18□□□□□ -1.9
CD46-210ENST00000462968 PPIL6Q8IXY8 311 aa3.18□□□□□ -1.9
CD46-210ENST00000462968 COLGALT2Q8IYK4 626 aa3.18□□□□□ -1.9
CD46-210ENST00000462968 D2HGDHQ8N465 521 aa3.18□□□□□ -1.9
CD46-210ENST00000462968 FGF11Q92914 225 aa3.18□□□□□ -1.9
CD46-210ENST00000462968 B3GALT6Q96L58 329 aa3.18□□□□□ -1.9
CD46-210ENST00000462968 MAP7D2Q96T17 732 aa3.18□□□□□ -1.9
CD46-210ENST00000462968 GAD1Q99259 594 aa3.18□□□□□ -1.9
CD46-210ENST00000462968 CLSTN3Q9BQT9 956 aa3.18□□□□□ -1.9
CD46-210ENST00000462968 COLEC11Q9BWP8 271 aa3.18□□□□□ -1.9
CD46-210ENST00000462968 ZDHHC5Q9C0B5 715 aa3.18□□□□□ -1.9
CD46-210ENST00000462968 GPR88Q9GZN0 384 aa3.18□□□□□ -1.9
CD46-210ENST00000462968 RIOX1Q9H6W3 641 aa3.18□□□□□ -1.9
CD46-210ENST00000462968 CAPN10Q9HC96 672 aa3.18□□□□□ -1.9
CD46-210ENST00000462968 FSCN3Q9NQT6 498 aa3.18□□□□□ -1.9
CD46-210ENST00000462968 TOMM22Q9NS69 142 aa3.18□□□□□ -1.9
CD46-210ENST00000462968 SLC9A2Q9UBY0 812 aa3.18□□□□□ -1.9
CD46-210ENST00000462968 ANAPC4Q9UJX5 808 aa3.18□□□□□ -1.9
CD46-210ENST00000462968 PILRBQ9UKJ0 227 aa3.18□□□□□ -1.9
CD46-210ENST00000462968 PACSIN3Q9UKS6 424 aa3.18□□□□□ -1.9
CD46-210ENST00000462968 MAN2B2Q9Y2E5 1009 aa3.18□□□□□ -1.9
CD46-210ENST00000462968 GREB1Q4ZG55 1949 aa3.18□□□□□ -1.9
CD46-210ENST00000462968 MIA3Q5JRA6 1907 aa3.18□□□□□ -1.9
CD46-210ENST00000462968 LAMA4Q16363 1823 aa3.18□□□□□ -1.9
CD46-210ENST00000462968 CNTNAP2Q9UHC6 1331 aa3.18□□□□□ -1.9
CD46-210ENST00000462968 NOTCH2Q04721 2471 aa3.17□□□□□ -1.9
CD46-210ENST00000462968 MYH7BA7E2Y1 1941 aa3.17□□□□□ -1.9
CD46-210ENST00000462968 URB1O60287 2271 aaKnown RBP3.17□□□□□ -1.9
CD46-210ENST00000462968 ATMQ13315 3056 aa3.17□□□□□ -1.9
CD46-210ENST00000462968 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.17□□□□□ -1.9
CD46-210ENST00000462968 PMS2P1A4D2B8 440 aa3.17□□□□□ -1.9
CD46-210ENST00000462968 CLEC18AA5D8T8 446 aa3.17□□□□□ -1.9
CD46-210ENST00000462968 ZAR1LA6NP61 321 aa3.17□□□□□ -1.9
CD46-210ENST00000462968 HEPACAM2A8MVW5 462 aa3.17□□□□□ -1.9
CD46-210ENST00000462968 PLK4O00444 970 aa3.17□□□□□ -1.9
CD46-210ENST00000462968 TRDMT1O14717 391 aaKnown RBP3.17□□□□□ -1.9
CD46-210ENST00000462968 MAGEB2O15479 319 aa3.17□□□□□ -1.9
CD46-210ENST00000462968 RNF113AO15541 343 aaKnown RBP3.17□□□□□ -1.9
CD46-210ENST00000462968 GJB3O75712 270 aa3.17□□□□□ -1.9
CD46-210ENST00000462968 POMCP01189 267 aa3.17□□□□□ -1.9
CD46-210ENST00000462968 LTFP02788 710 aa3.17□□□□□ -1.9
CD46-210ENST00000462968 ITGAVP06756 1048 aa3.17□□□□□ -1.9
CD46-210ENST00000462968 ZFYP08048 801 aaPredicted RBP3.17□□□□□ -1.9
CD46-210ENST00000462968 SNRPB2P08579 225 aaKnown RBP3.17□□□□□ -1.9
CD46-210ENST00000462968 CT47B1P0C2W7 299 aaPredicted RBP3.17□□□□□ -1.9
CD46-210ENST00000462968 NAT2P11245 290 aa3.17□□□□□ -1.9
CD46-210ENST00000462968 MYF5P13349 255 aa3.17□□□□□ -1.9
CD46-210ENST00000462968 BCKDHBP21953 392 aa3.17□□□□□ -1.9
CD46-210ENST00000462968 FGFR4P22455 802 aa3.17□□□□□ -1.9
CD46-210ENST00000462968 PTGER3P43115 390 aa3.17□□□□□ -1.9
CD46-210ENST00000462968 TMPRSS3P57727 454 aa3.17□□□□□ -1.9
CD46-210ENST00000462968 ACTR2P61160 394 aa3.17□□□□□ -1.9
CD46-210ENST00000462968 CDC42EP1Q00587 391 aa3.17□□□□□ -1.9
CD46-210ENST00000462968 HGFACQ04756 655 aa3.17□□□□□ -1.9
CD46-210ENST00000462968 DSC1Q08554 894 aa3.17□□□□□ -1.9
CD46-210ENST00000462968 SPIRE1Q08AE8 756 aa3.17□□□□□ -1.9
CD46-210ENST00000462968 DDX10Q13206 875 aaKnown RBP3.17□□□□□ -1.9
CD46-210ENST00000462968 RAB33AQ14088 237 aa3.17□□□□□ -1.9
CD46-210ENST00000462968 TOB2Q14106 344 aaPredicted RBP3.17□□□□□ -1.9
CD46-210ENST00000462968 DMC1Q14565 340 aa3.17□□□□□ -1.9
CD46-210ENST00000462968 SF1Q15637 639 aaKnown RBP3.17□□□□□ -1.9
CD46-210ENST00000462968 PRSS53Q2L4Q9 553 aa3.17□□□□□ -1.9
CD46-210ENST00000462968 ARHGAP29Q52LW3 1261 aa3.17□□□□□ -1.9
CD46-210ENST00000462968 ASPRV1Q53RT3 343 aa3.17□□□□□ -1.9
CD46-210ENST00000462968 CYP4A22Q5TCH4 519 aa3.17□□□□□ -1.9
CD46-210ENST00000462968 ARHGAP40Q5TG30 622 aa3.17□□□□□ -1.9
CD46-210ENST00000462968 BROXQ5VW32 411 aa3.17□□□□□ -1.9
CD46-210ENST00000462968 FAM160B1Q5W0V3 765 aa3.17□□□□□ -1.9
CD46-210ENST00000462968 LMBRD2Q68DH5 695 aaPredicted RBP3.17□□□□□ -1.9
CD46-210ENST00000462968 FSTL4Q6MZW2 842 aa3.17□□□□□ -1.9
CD46-210ENST00000462968 FUT10Q6P4F1 479 aa3.17□□□□□ -1.9
CD46-210ENST00000462968 PRSS55Q6UWB4 352 aaPredicted RBP3.17□□□□□ -1.9
CD46-210ENST00000462968 CLEC18BQ6UXF7 455 aa3.17□□□□□ -1.9
CD46-210ENST00000462968 USP30Q70CQ3 517 aa3.17□□□□□ -1.9
CD46-210ENST00000462968 PDZD4Q76G19 769 aaPredicted RBP3.17□□□□□ -1.9
CD46-210ENST00000462968 RHOUQ7L0Q8 258 aa3.17□□□□□ -1.9
CD46-210ENST00000462968 MRPL10Q7Z7H8 261 aaKnown RBP3.17□□□□□ -1.9
CD46-210ENST00000462968 RASSF3Q86WH2 238 aa3.17□□□□□ -1.9
CD46-210ENST00000462968 TMPRSS12Q86WS5 348 aa3.17□□□□□ -1.9
CD46-210ENST00000462968 DGKHQ86XP1 1220 aa3.17□□□□□ -1.9
CD46-210ENST00000462968 CLEC18CQ8NCF0 446 aa3.17□□□□□ -1.9
CD46-210ENST00000462968 TSTD1Q8NFU3 115 aa3.17□□□□□ -1.9
CD46-210ENST00000462968 OR2I1PQ8NGU4 316 aa3.17□□□□□ -1.9
CD46-210ENST00000462968 TTC8Q8TAM2 541 aa3.17□□□□□ -1.9
CD46-210ENST00000462968 UHMK1Q8TAS1 419 aaKnown RBP3.17□□□□□ -1.9
CD46-210ENST00000462968 LNX1Q8TBB1 728 aaPredicted RBP3.17□□□□□ -1.9
CD46-210ENST00000462968 SNRNP27Q8WVK2 155 aaKnown RBP3.17□□□□□ -1.9
CD46-210ENST00000462968 C1orf159Q96HA4 380 aa3.17□□□□□ -1.9
CD46-210ENST00000462968 TMEM176AQ96HP8 235 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms