RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 FBXO36Q8NEA4 188 aa14.57□□□□□ -0.08
ERCC3-205ENST00000460485 UHMK1Q8TAS1 419 aaKnown RBP14.57□□□□□ -0.08
ERCC3-205ENST00000460485 MYLPFQ96A32 169 aa14.57□□□□□ -0.08
ERCC3-205ENST00000460485 FUBP3Q96I24 572 aaKnown RBP eCLIP14.57□□□□□ -0.08
ERCC3-205ENST00000460485 SPATA13Q96N96 652 aa14.57□□□□□ -0.08
ERCC3-205ENST00000460485 NECAB3Q96P71 396 aaPredicted RBP14.57□□□□□ -0.08
ERCC3-205ENST00000460485 PPP1R2P1Q96PQ5 205 aa14.57□□□□□ -0.08
ERCC3-205ENST00000460485 ZNF317Q96PQ6 595 aaPredicted RBP14.57□□□□□ -0.08
ERCC3-205ENST00000460485 EPAS1Q99814 870 aa14.57□□□□□ -0.08
ERCC3-205ENST00000460485 SMOQ99835 787 aa14.57□□□□□ -0.08
ERCC3-205ENST00000460485 DHRS4Q9BTZ2 278 aa14.57□□□□□ -0.08
ERCC3-205ENST00000460485 OXCT2Q9BYC2 517 aaPredicted RBP14.57□□□□□ -0.08
ERCC3-205ENST00000460485 ULBP1Q9BZM6 244 aa14.57□□□□□ -0.08
ERCC3-205ENST00000460485 EPHX3Q9H6B9 360 aa14.57□□□□□ -0.08
ERCC3-205ENST00000460485 SLC28A3Q9HAS3 691 aa14.57□□□□□ -0.08
ERCC3-205ENST00000460485 ARHGEF4Q9NR80 690 aa14.57□□□□□ -0.08
ERCC3-205ENST00000460485 RAB6BQ9NRW1 208 aa14.57□□□□□ -0.08
ERCC3-205ENST00000460485 DNAJC17Q9NVM6 304 aaKnown RBP14.57□□□□□ -0.08
ERCC3-205ENST00000460485 GPATCH2LQ9NWQ4 482 aa14.57□□□□□ -0.08
ERCC3-205ENST00000460485 TEX264Q9Y6I9 313 aa14.57□□□□□ -0.08
ERCC3-205ENST00000460485 IKBKGQ9Y6K9 419 aa14.57□□□□□ -0.08
ERCC3-205ENST00000460485 MUC6Q6W4X9 2439 aa14.57□□□□□ -0.08
ERCC3-205ENST00000460485 GOLGA6L7A0A1B0GV03 622 aa14.56□□□□□ -0.08
ERCC3-205ENST00000460485 CASTOR2A6NHX0 329 aa14.56□□□□□ -0.08
ERCC3-205ENST00000460485 ERI2A8K979 691 aaKnown RBP14.56□□□□□ -0.08
ERCC3-205ENST00000460485 AP3B1O00203 1094 aa14.56□□□□□ -0.08
ERCC3-205ENST00000460485 EEF2KO00418 725 aaKnown RBP14.56□□□□□ -0.08
ERCC3-205ENST00000460485 SYN3O14994 580 aa14.56□□□□□ -0.08
ERCC3-205ENST00000460485 HOXA2O43364 376 aa14.56□□□□□ -0.08
ERCC3-205ENST00000460485 HCRTO43612 131 aa14.56□□□□□ -0.08
ERCC3-205ENST00000460485 ATP2C2O75185 946 aa14.56□□□□□ -0.08
ERCC3-205ENST00000460485 B3GAT3O94766 335 aa14.56□□□□□ -0.08
ERCC3-205ENST00000460485 ZWINTO95229 277 aa14.56□□□□□ -0.08
ERCC3-205ENST00000460485 ACAT1P24752 427 aaKnown RBP14.56□□□□□ -0.08
ERCC3-205ENST00000460485 RBL1P28749 1068 aa14.56□□□□□ -0.08
ERCC3-205ENST00000460485 FAM189BP81408 668 aa14.56□□□□□ -0.08
ERCC3-205ENST00000460485 MTA1Q13330 715 aa14.56□□□□□ -0.08
ERCC3-205ENST00000460485 PRKD1Q15139 912 aaPredicted RBP14.56□□□□□ -0.08
ERCC3-205ENST00000460485 NFE2Q16621 373 aaPredicted RBP14.56□□□□□ -0.08
ERCC3-205ENST00000460485 SKIDA1Q1XH10 827 aa14.56□□□□□ -0.08
ERCC3-205ENST00000460485 BRMS1LQ5PSV4 323 aa14.56□□□□□ -0.08
ERCC3-205ENST00000460485 ACBD5Q5T8D3 534 aaPredicted RBP14.56□□□□□ -0.08
ERCC3-205ENST00000460485 OTUD1Q5VV17 481 aaPredicted RBP14.56□□□□□ -0.08
ERCC3-205ENST00000460485 VSTM1Q6UX27 236 aa14.56□□□□□ -0.08
ERCC3-205ENST00000460485 NPNTQ6UXI9 565 aa14.56□□□□□ -0.08
ERCC3-205ENST00000460485 RGS9BPQ6ZS82 235 aa14.56□□□□□ -0.08
ERCC3-205ENST00000460485 CYS1Q717R9 158 aa14.56□□□□□ -0.08
ERCC3-205ENST00000460485 DCP1BQ8IZD4 617 aaKnown RBP14.56□□□□□ -0.08
ERCC3-205ENST00000460485 CCDC185Q8N715 623 aa14.56□□□□□ -0.08
ERCC3-205ENST00000460485 HTR3CQ8WXA8 447 aa14.56□□□□□ -0.08
ERCC3-205ENST00000460485 LPPQ93052 612 aa14.56□□□□□ -0.08
ERCC3-205ENST00000460485 MAGEB18Q96M61 343 aa14.56□□□□□ -0.08
ERCC3-205ENST00000460485 VAT1Q99536 393 aa14.56□□□□□ -0.08
ERCC3-205ENST00000460485 PKMYT1Q99640 499 aa14.56□□□□□ -0.08
ERCC3-205ENST00000460485 STARD7Q9NQZ5 370 aa14.56□□□□□ -0.08
ERCC3-205ENST00000460485 MIOSQ9NXC5 875 aa14.56□□□□□ -0.08
ERCC3-205ENST00000460485 DTLQ9NZJ0 730 aa14.56□□□□□ -0.08
ERCC3-205ENST00000460485 FNIP2Q9P278 1114 aa14.56□□□□□ -0.08
ERCC3-205ENST00000460485 RABGEF1Q9UJ41 708 aa14.56□□□□□ -0.08
ERCC3-205ENST00000460485 ZNF180Q9UJW8 692 aa14.56□□□□□ -0.08
ERCC3-205ENST00000460485 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.56□□□□□ -0.08
ERCC3-205ENST00000460485 ZNF638Q14966 1978 aaKnown RBP14.56□□□□□ -0.08
ERCC3-205ENST00000460485 CHD7Q9P2D1 2997 aa14.55□□□□□ -0.08
ERCC3-205ENST00000460485 MYBPHLA2RUH7 354 aa14.55□□□□□ -0.08
ERCC3-205ENST00000460485 HHLA1C9JL84 531 aa14.55□□□□□ -0.08
ERCC3-205ENST00000460485 TM9SF1O15321 606 aa14.55□□□□□ -0.08
ERCC3-205ENST00000460485 MGEA5O60502 916 aa14.55□□□□□ -0.08
ERCC3-205ENST00000460485 PARNO95453 639 aaKnown RBP14.55□□□□□ -0.08
ERCC3-205ENST00000460485 CKBP12277 381 aa14.55□□□□□ -0.08
ERCC3-205ENST00000460485 KRT15P19012 456 aa14.55□□□□□ -0.08
ERCC3-205ENST00000460485 POU3F3P20264 500 aaPredicted RBP14.55□□□□□ -0.08
ERCC3-205ENST00000460485 DRD4P21917 467 aa14.55□□□□□ -0.08
ERCC3-205ENST00000460485 ADRA1BP35368 520 aa14.55□□□□□ -0.08
ERCC3-205ENST00000460485 MSH2P43246 934 aa14.55□□□□□ -0.08
ERCC3-205ENST00000460485 MAGEA3P43357 314 aa14.55□□□□□ -0.08
ERCC3-205ENST00000460485 CXCR3P49682 368 aa14.55□□□□□ -0.08
ERCC3-205ENST00000460485 CDK7P50613 346 aa14.55□□□□□ -0.08
ERCC3-205ENST00000460485 CORO7P57737 925 aa14.55□□□□□ -0.08
ERCC3-205ENST00000460485 COG7P83436 770 aa14.55□□□□□ -0.08
ERCC3-205ENST00000460485 DSC1Q08554 894 aa14.55□□□□□ -0.08
ERCC3-205ENST00000460485 SMARCB1Q12824 385 aa14.55□□□□□ -0.08
ERCC3-205ENST00000460485 SEMA3BQ13214 749 aa14.55□□□□□ -0.08
ERCC3-205ENST00000460485 BFSP2Q13515 415 aa14.55□□□□□ -0.08
ERCC3-205ENST00000460485 DPYSQ14117 519 aa14.55□□□□□ -0.08
ERCC3-205ENST00000460485 BBS9Q3SYG4 887 aa14.55□□□□□ -0.08
ERCC3-205ENST00000460485 ANKRD22Q5VYY1 191 aa14.55□□□□□ -0.08
ERCC3-205ENST00000460485 ARMC3Q5W041 872 aa14.55□□□□□ -0.08
ERCC3-205ENST00000460485 KCNT2Q6UVM3 1135 aa14.55□□□□□ -0.08
ERCC3-205ENST00000460485 RFX8Q6ZV50 586 aa14.55□□□□□ -0.08
ERCC3-205ENST00000460485 PRUNE1Q86TP1 453 aa14.55□□□□□ -0.08
ERCC3-205ENST00000460485 FAM131BQ86XD5 332 aa14.55□□□□□ -0.08
ERCC3-205ENST00000460485 ARHGAP18Q8N392 663 aa14.55□□□□□ -0.08
ERCC3-205ENST00000460485 CCDC197Q8NCU1 140 aa14.55□□□□□ -0.08
ERCC3-205ENST00000460485 C3orf58Q8NDZ4 430 aa14.55□□□□□ -0.08
ERCC3-205ENST00000460485 CKAP2Q8WWK9 683 aa14.55□□□□□ -0.08
ERCC3-205ENST00000460485 MTIF3Q9H2K0 278 aaKnown RBP14.55□□□□□ -0.08
ERCC3-205ENST00000460485 TRABDQ9H4I3 376 aa14.55□□□□□ -0.08
ERCC3-205ENST00000460485 ACTR5Q9H9F9 607 aaPredicted RBP14.55□□□□□ -0.08
ERCC3-205ENST00000460485 DONSONQ9NYP3 566 aa14.55□□□□□ -0.08
ERCC3-205ENST00000460485 FBXW11Q9UKB1 542 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms