RNA–Protein interactions for RNA: ENST00000453553.1

USP25-206, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 3

Gene USP25, Length 611 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-206ENST00000453553 PTF1AQ7RTS3 328 aa5.32□□□□□ -1.56
USP25-206ENST00000453553 ANKRD18AQ8IVF6 992 aa5.32□□□□□ -1.56
USP25-206ENST00000453553 UBE2Q2Q8WVN8 375 aa5.32□□□□□ -1.56
USP25-206ENST00000453553 NPIPB3Q92617 1050 aa5.32□□□□□ -1.56
USP25-206ENST00000453553 REXO5Q96IC2 774 aaKnown RBP5.32□□□□□ -1.56
USP25-206ENST00000453553 HIC2Q96JB3 615 aa5.32□□□□□ -1.56
USP25-206ENST00000453553 FAR2Q96K12 515 aa5.32□□□□□ -1.56
USP25-206ENST00000453553 TBATAQ96M53 351 aa5.32□□□□□ -1.56
USP25-206ENST00000453553 DDX23Q9BUQ8 820 aaKnown RBP5.32□□□□□ -1.56
USP25-206ENST00000453553 TMEM120AQ9BXJ8 343 aa5.32□□□□□ -1.56
USP25-206ENST00000453553 VPS16Q9H269 839 aa5.32□□□□□ -1.56
USP25-206ENST00000453553 CDCP1Q9H5V8 836 aa5.32□□□□□ -1.56
USP25-206ENST00000453553 CCDC134Q9H6E4 229 aa5.32□□□□□ -1.56
USP25-206ENST00000453553 PRDM8Q9NQV8 689 aa5.32□□□□□ -1.56
USP25-206ENST00000453553 ZBTB1Q9Y2K1 713 aa5.32□□□□□ -1.56
USP25-206ENST00000453553 LAS1LQ9Y4W2 734 aaKnown RBP5.32□□□□□ -1.56
USP25-206ENST00000453553 LRRFIP2Q9Y608 721 aaKnown RBP5.32□□□□□ -1.56
USP25-206ENST00000453553 MANSC4A6NHS7 340 aaPredicted RBP5.31□□□□□ -1.56
USP25-206ENST00000453553 LINC01548A6NM66 108 aa5.31□□□□□ -1.56
USP25-206ENST00000453553 TTC34A8MYJ7 566 aa5.31□□□□□ -1.56
USP25-206ENST00000453553 KIF28PB7ZC32 967 aa5.31□□□□□ -1.56
USP25-206ENST00000453553 TMEM232C9JQI7 657 aa5.31□□□□□ -1.56
USP25-206ENST00000453553 M0QYT0 321 aa5.31□□□□□ -1.56
USP25-206ENST00000453553 IPO5O00410 1097 aaKnown RBP5.31□□□□□ -1.56
USP25-206ENST00000453553 NKX2-8O15522 239 aa5.31□□□□□ -1.56
USP25-206ENST00000453553 EPB41L2O43491 1005 aaKnown RBP5.31□□□□□ -1.56
USP25-206ENST00000453553 PPP6R2O75170 966 aa5.31□□□□□ -1.56
USP25-206ENST00000453553 LARGE1O95461 756 aa5.31□□□□□ -1.56
USP25-206ENST00000453553 CYP2D6P10635 497 aa5.31□□□□□ -1.56
USP25-206ENST00000453553 CYP2A6P11509 494 aaPredicted RBP5.31□□□□□ -1.56
USP25-206ENST00000453553 VEGFAP15692 232 aaPredicted RBP5.31□□□□□ -1.56
USP25-206ENST00000453553 THBS4P35443 961 aa5.31□□□□□ -1.56
USP25-206ENST00000453553 CDK7P50613 346 aa5.31□□□□□ -1.56
USP25-206ENST00000453553 CNGA3Q16281 694 aa5.31□□□□□ -1.56
USP25-206ENST00000453553 AWAT1Q58HT5 328 aa5.31□□□□□ -1.56
USP25-206ENST00000453553 JMJD6Q6NYC1 403 aaPredicted RBP5.31□□□□□ -1.56
USP25-206ENST00000453553 NFRKBQ6P4R8 1299 aa5.31□□□□□ -1.56
USP25-206ENST00000453553 KYAT3Q6YP21 454 aaKnown RBP5.31□□□□□ -1.56
USP25-206ENST00000453553 RAB11FIP2Q7L804 512 aa5.31□□□□□ -1.56
USP25-206ENST00000453553 GALNT15Q8N3T1 639 aa5.31□□□□□ -1.56
USP25-206ENST00000453553 SKA1Q96BD8 255 aa5.31□□□□□ -1.56
USP25-206ENST00000453553 CRAMP1Q96RY5 1269 aa5.31□□□□□ -1.56
USP25-206ENST00000453553 MECRQ9BV79 373 aa5.31□□□□□ -1.56
USP25-206ENST00000453553 ELOVL1Q9BW60 279 aa5.31□□□□□ -1.56
USP25-206ENST00000453553 RNF26Q9BY78 433 aaPredicted RBP5.31□□□□□ -1.56
USP25-206ENST00000453553 BRD8Q9H0E9 1235 aa5.31□□□□□ -1.56
USP25-206ENST00000453553 DAPP1Q9UN19 280 aa5.31□□□□□ -1.56
USP25-206ENST00000453553 HEMK1Q9Y5R4 338 aaPredicted RBP5.31□□□□□ -1.56
USP25-206ENST00000453553 SCINQ9Y6U3 715 aa5.31□□□□□ -1.56
USP25-206ENST00000453553 NCAM2O15394 837 aa5.3□□□□□ -1.56
USP25-206ENST00000453553 RBMXL2O75526 392 aaKnown RBP5.3□□□□□ -1.56
USP25-206ENST00000453553 DHRS4L1P0CG22 281 aa5.3□□□□□ -1.56
USP25-206ENST00000453553 SFPQP23246 707 aaKnown RBP eCLIP5.3□□□□□ -1.56
USP25-206ENST00000453553 AGTR2P50052 363 aa5.3□□□□□ -1.56
USP25-206ENST00000453553 NANOS3P60323 173 aaKnown RBP5.3□□□□□ -1.56
USP25-206ENST00000453553 SF3A3Q12874 501 aaKnown RBP eCLIP5.3□□□□□ -1.56
USP25-206ENST00000453553 TBX2Q13207 712 aaPredicted RBP5.3□□□□□ -1.56
USP25-206ENST00000453553 SLC14A1Q13336 389 aa5.3□□□□□ -1.56
USP25-206ENST00000453553 GAB1Q13480 694 aa5.3□□□□□ -1.56
USP25-206ENST00000453553 PRKG1Q13976 671 aa5.3□□□□□ -1.56
USP25-206ENST00000453553 POSTNQ15063 836 aa5.3□□□□□ -1.56
USP25-206ENST00000453553 PFKFB3Q16875 520 aaPredicted RBP5.3□□□□□ -1.56
USP25-206ENST00000453553 ANKRD40Q6AI12 368 aa5.3□□□□□ -1.56
USP25-206ENST00000453553 ZNF782Q6ZMW2 699 aaPredicted RBP5.3□□□□□ -1.56
USP25-206ENST00000453553 MAATS1Q7Z4T9 603 aa5.3□□□□□ -1.56
USP25-206ENST00000453553 C16orf71Q8IYS4 520 aaPredicted RBP5.3□□□□□ -1.56
USP25-206ENST00000453553 ZNF398Q8TD17 642 aa5.3□□□□□ -1.56
USP25-206ENST00000453553 HMGB4Q8WW32 186 aa5.3□□□□□ -1.56
USP25-206ENST00000453553 AKAP1Q92667 903 aaKnown RBP eCLIP5.3□□□□□ -1.56
USP25-206ENST00000453553 DPF1Q92782 380 aa5.3□□□□□ -1.56
USP25-206ENST00000453553 ELAC1Q9H777 363 aaKnown RBP5.3□□□□□ -1.56
USP25-206ENST00000453553 ITM2CQ9NQX7 267 aa5.3□□□□□ -1.56
USP25-206ENST00000453553 BCCIPQ9P287 314 aaKnown RBP eCLIP5.3□□□□□ -1.56
USP25-206ENST00000453553 SRP68Q9UHB9 627 aaKnown RBP5.3□□□□□ -1.56
USP25-206ENST00000453553 MAFFQ9ULX9 164 aa5.3□□□□□ -1.56
USP25-206ENST00000453553 C19orf53Q9UNZ5 99 aaPredicted RBP5.3□□□□□ -1.56
USP25-206ENST00000453553 WIPF3A6NGB9 483 aa5.29□□□□□ -1.56
USP25-206ENST00000453553 RRN3P2A6NIE6 340 aa5.29□□□□□ -1.56
USP25-206ENST00000453553 C16orf96A6NNT2 1141 aa5.29□□□□□ -1.56
USP25-206ENST00000453553 PPFIA2O75334 1257 aa5.29□□□□□ -1.56
USP25-206ENST00000453553 LATS1O95835 1130 aa5.29□□□□□ -1.56
USP25-206ENST00000453553 PYGLP06737 847 aa5.29□□□□□ -1.56
USP25-206ENST00000453553 SLC3A2P08195 630 aaKnown RBP5.29□□□□□ -1.56
USP25-206ENST00000453553 TNFAIP3P21580 790 aa5.29□□□□□ -1.56
USP25-206ENST00000453553 HOXD12P35452 270 aa5.29□□□□□ -1.56
USP25-206ENST00000453553 DDIT3P35638 169 aa5.29□□□□□ -1.56
USP25-206ENST00000453553 CASP2P42575 452 aa5.29□□□□□ -1.56
USP25-206ENST00000453553 RPL15P61313 204 aaKnown RBP5.29□□□□□ -1.56
USP25-206ENST00000453553 RBM6P78332 1123 aaKnown RBP5.29□□□□□ -1.56
USP25-206ENST00000453553 SLC10A2Q12908 348 aaPredicted RBP5.29□□□□□ -1.56
USP25-206ENST00000453553 DDX10Q13206 875 aaKnown RBP5.29□□□□□ -1.56
USP25-206ENST00000453553 RPS6KA2Q15349 733 aa5.29□□□□□ -1.56
USP25-206ENST00000453553 TIGD6Q17RP2 521 aa5.29□□□□□ -1.56
USP25-206ENST00000453553 CC2D1BQ5T0F9 858 aaKnown RBP5.29□□□□□ -1.56
USP25-206ENST00000453553 WDR93Q6P2C0 686 aa5.29□□□□□ -1.56
USP25-206ENST00000453553 CYP26C1Q6V0L0 522 aa5.29□□□□□ -1.56
USP25-206ENST00000453553 LAS2Q8IYD9 372 aa5.29□□□□□ -1.56
USP25-206ENST00000453553 C8orf58Q8NAV2 365 aa5.29□□□□□ -1.56
USP25-206ENST00000453553 IL17REQ8NFR9 667 aa5.29□□□□□ -1.56
USP25-206ENST00000453553 RUBCNQ92622 972 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms